KEGG   Anoplopoma fimbria (sablefish): 129090285
Entry
129090285         CDS       T09102                                 
Symbol
eda
Name
(RefSeq) ectodysplasin-A isoform X1
  KO
K05480  ectodysplasin-A
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    129090285 (eda)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:afb04052]
    129090285 (eda)
Cytokines and neuropeptides [BR:afb04052]
 Cytokines
  Tumor necrosis fators
   129090285 (eda)
SSDB
Motif
Pfam: TNF Collagen
Other DBs
NCBI-GeneID: 129090285
NCBI-ProteinID: XP_054453858
LinkDB
Position
4
AA seq 372 aa
MAYDGSPAEGFPDKVMPRAAPCTCNKKCRSRSGSVVFLGLFLLSLSLHAVTLVCYLDLRS
EVKREIIHQKRDSILTLAGSDLADPEEMLSPPGHPRPDSGSSIRGAEVHEEKLLHRNSEF
HATEDNRGITQRAKRSPGKQPETESTGKERRKEKKKGRKRSVPGPPGPPGPPGPQGPPGI
PGIPGIPGSNAVGPAGPPGPPGPQGPPGTQGPAGVPDKTKTKEFQPAVVHLQGQETTIQV
REDLSEGILRNWKMVSIHHRVFKMHSRSGELEVLLDGVYFIYSQVEVYYLNFTDIASYEV
MVDSNPFLRCTCSIETGQRKFNTCYTAGVSLLRAGQRISIRIVYEDTLISMTNHTTFLGS
VRLGEAPSAGQN
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcatacgatggttcacctgcggagggtttcccggacaaagtgatgcccagagcggct
ccctgcacgtgtaacaagaagtgcaggagtcggagcggcagtgttgtcttcctgggatta
ttcctgctgtcgctgtctctgcacgctgtcaccctcgtctgctacttggatctgcggtcc
gaagtcaaaagggaaattatccaccagaagcgggattcaatattgacacttgcggggagt
gacctggctgacccggaggagatgctctcaccgcccgggcacccgcgaccggactccggg
agcagcatccgaggcgcagaggtgcatgaggagaagttactacacagaaatagtgaattc
catgccacagaggataacaggggcataactcagcgagcgaaaagaagtcccggcaagcag
ccagaaacagaatcgactggaaaggaaagaaggaaagaaaagaaaaaagggagaaaacgg
tctgtgccgggcccccctggtccccctggtccccccggcccacaggggccgccgggcatc
cctggaatcccgggtattccaggaagcaacgctgtggggcctgcaggaccccctggaccc
cccgggccacagggacctccgggcactcaaggtccagcaggggttcccgataagacgaaa
acaaaagaattccagcctgctgtggttcatttgcaaggacaggagacaaccatccaagtg
agagaagatctttctgaaggcatccttaggaactggaagatggtgtccatccatcaccgc
gtgtttaaaatgcactctcgctctggagagctagaggtgctgctggatggtgtctacttc
atatatagtcaggtagaagtgtactacctcaactttaccgacattgccagctatgaggtg
atggtggactccaacccgttcctccgctgcacctgcagcatcgagacgggccagcgcaag
ttcaacacctgctacacggctggggtgagcctgctccgcgccggccagaggatctccata
cgcatagtgtatgaggacacgctcatcagcatgaccaaccacaccaccttcctgggaagt
gtcaggcttggagaggcgccatctgctggacagaactga

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