Anoplopoma fimbria (sablefish): 129090288
Help
Entry
129090288 CDS
T09102
Symbol
slitrk2
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129090288 (slitrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRCT
LRRNT
LRR_LRWD1
MCLC
Motif
Other DBs
NCBI-GeneID:
129090288
NCBI-ProteinID:
XP_054453863
LinkDB
All DBs
Position
4:3167386..3169978
Genome browser
AA seq
851 aa
AA seq
DB search
MLSGVLLLSVLTVTSLSTESRKTSASKEICKTRCACEERENVLNINCENKGFTSVSQFQA
PPNKISQLFLNGNFLSRLSANEFVNYGNVTSLHLGNNGLQEIRTGAFNGLRFLKRLHLNN
NNLEVIKEDSFTGLESLEYLQADYNYISAIEPGAFSKLNKLKVLILNDNLLLSLPPNIFR
FVLLTHLDLRGNRLKMLPFAGVLEHIGGIMEIQLEENPWNCTCDLIPLKSWLDTISVFVG
DIVCETPFRLHGKDITQLIKQDLCPRRNAGERVHPPSDSHFQGALPPTYHPGMITPTRAP
KASRPPKMRYRPTPRITKDKHVFGPIMVYQTRSPVPMLCPTVCVCTSQNPDSGLNINCQE
RKLHNISELNPKPSYPKKLHLTGNYLQVIYRTDLTEYSSLELLHLGNNRIAVIREGAFEN
LTNLRRLYLNGNYIESLTQSLFAGLQSLQYLYLEYNIIKDILPQTFNALHNLQLLFLNNN
LLRSLPDNVFGGTMLTRLNLRNNHFSYLAVRGVLDQLSAFIQIDLQENPWDCTCDIVALK
NWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNEAICPEPTPTIISPGTEATTPSSSSFS
SISPTESRIHTPELHPEVPLSVLILGLLVVFILSVCFGAGLFVFVLKRRKGVEHVPTGAN
NLDLNSFQVQYGSYTPEPTQDKTSESHVYNYIPPPVGSMCQNPIYMQKDGEQVAYYRNLK
ELSFGPLDAKKDVLTRSPGAYTISTMDFMDKSPTSCGLSTPEPPEMLYQNLGERPHKELP
TAAGAPPFHYNFCTLPKRPCIVPPYEAATARRHITNQDRLNKTVLYGTPRKYYGADHPSK
TMSTRFCSLGS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcggcgtcctcttgctgagcgtcctcacggtcaccagcctctcaacggagagc
cgcaaaacttcagcctccaaagagatctgcaagacccgctgcgcctgtgaggagcgggag
aacgttctgaacatcaactgtgagaataaaggatttacctccgtcagtcagttccaggcg
cccccgaataaaatctctcagctttttctcaatggaaactttctgtcacggcttagcgcc
aatgagtttgtcaattacggcaatgtcacctcactgcatctggggaataacggcttgcag
gagatccgaaccggagcgttcaacgggctgcgcttcctgaagcggctccacttgaacaac
aacaacctggaggtgattaaagaggactccttcacaggactggagagtttggagtattta
caggcagactataattatatcagcgccatagagccgggtgcttttagtaagctgaataag
ctcaaagtgttgatcctaaatgacaacctgctgttgtctttgcctcccaacattttccgc
ttcgtgctcctcacccacttggatttacgtggcaaccggctcaagatgctgccatttgcc
ggagttttagagcacatagggggcatcatggagatccagctggaggagaacccgtggaat
tgcacctgtgatctcattcccctcaaatcctggttggacactatttctgtcttcgtgggg
gacatagtgtgtgagacgccgttcaggctgcatggtaaagacatcacgcagctcataaag
caggacctgtgcccacgcaggaacgctggagaacgcgttcaccccccctccgactctcac
tttcagggggccctgcctccgacctaccatcccggcatgatcacccccacccgtgcccca
aaagcttcccgcccgcccaaaatgcgctacaggcccaccccgcgcatcacaaaggacaaa
catgtctttgggcccataatggtttaccagacgcgctcccctgtgcccatgttatgtccc
actgtgtgcgtgtgcacatcacagaaccctgacagcggattgaacatcaattgccaagag
cgaaagttgcacaacatcagcgagctgaaccccaagccctcctacccaaagaagctccac
ctgaccggtaactacttacaagtcatttacagaactgatctcaccgagtacagctcactg
gagctgcttcatttaggaaataataggatagcagtgattcgggaaggtgcattcgagaat
ctaaccaacctcagacggctctatctgaatgggaattacattgaatcacttactcaatcg
ctctttgctggcctgcagtcgctccagtatctgtatttggaatataacatcatcaaagac
attttaccacaaacatttaacgctctgcataaccttcagctgctctttctgaacaacaac
ctgttaaggtcgctccccgacaatgtttttgggggcaccatgctaacacgactcaacttg
aggaataaccatttctcctacctcgccgttcgaggggtcctagaccagctgtcagcgttt
atccagatcgacctgcaggagaacccctgggactgcacctgtgacattgttgcactcaag
aactggatggagctgtccagtaccagcgtagtggttaacgaaatcacgtgtgattccccc
tctaaacatgcaggtcgcctgctgcgctcacttcgcaacgaggccatctgccccgagccc
acccccacgataataagcccgggcaccgaggccaccacaccttcctcgtcttctttcagc
tcaatcagccccactgaatcccggatccacactccagagttgcaccccgaggtcccactg
tcagtcctgattctcggacttcttgttgttttcatcctgtcggtctgctttggagcaggc
ctctttgtttttgttctgaaaaggcgtaaaggagtggaacatgtccccacaggcgctaac
aacttagatctcaactctttccaagtgcaatatggctcctacactcctgaaccgacccaa
gacaaaacctccgaaagccacgtttataactacattcctccacctgtgggctctatgtgc
caaaaccctatttacatgcagaaggatggtgaacaggtggcatattatcgcaacctgaag
gagctcagttttgggcccctggacgcaaagaaggatgtcctcacccgaagcccaggggcc
tacaccatcagcacaatggattttatggataaatctccgacatcatgcggtttgagcacc
ccagagcctcctgagatgttgtatcaaaatttaggggagaggccccacaaagagcttccc
acggctgcaggcgcccctcctttccattacaacttttgcactttacctaagagaccttgc
atcgtgcccccctacgaggccgccacagcccggcggcacatcaccaaccaggacaggctg
aacaaaacggtgctgtacgggaccccgaggaagtactacggggctgaccacccttcaaaa
acaatgagcacccgcttctgctccctgggaagctaa
DBGET
integrated database retrieval system