Anoplopoma fimbria (sablefish): 129090288
Help
Entry
129090288 CDS
T09102
Symbol
slitrk2
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
afb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129090288 (slitrk2)
04517 IgSF CAM signaling
129090288 (slitrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
MCLC
Motif
Other DBs
NCBI-GeneID:
129090288
NCBI-ProteinID:
XP_054453863
LinkDB
All DBs
Position
4:3167386..3169978
Genome browser
AA seq
851 aa
AA seq
DB search
MLSGVLLLSVLTVTSLSTESRKTSASKEICKTRCACEERENVLNINCENKGFTSVSQFQA
PPNKISQLFLNGNFLSRLSANEFVNYGNVTSLHLGNNGLQEIRTGAFNGLRFLKRLHLNN
NNLEVIKEDSFTGLESLEYLQADYNYISAIEPGAFSKLNKLKVLILNDNLLLSLPPNIFR
FVLLTHLDLRGNRLKMLPFAGVLEHIGGIMEIQLEENPWNCTCDLIPLKSWLDTISVFVG
DIVCETPFRLHGKDITQLIKQDLCPRRNAGERVHPPSDSHFQGALPPTYHPGMITPTRAP
KASRPPKMRYRPTPRITKDKHVFGPIMVYQTRSPVPMLCPTVCVCTSQNPDSGLNINCQE
RKLHNISELNPKPSYPKKLHLTGNYLQVIYRTDLTEYSSLELLHLGNNRIAVIREGAFEN
LTNLRRLYLNGNYIESLTQSLFAGLQSLQYLYLEYNIIKDILPQTFNALHNLQLLFLNNN
LLRSLPDNVFGGTMLTRLNLRNNHFSYLAVRGVLDQLSAFIQIDLQENPWDCTCDIVALK
NWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNEAICPEPTPTIISPGTEATTPSSSSFS
SISPTESRIHTPELHPEVPLSVLILGLLVVFILSVCFGAGLFVFVLKRRKGVEHVPTGAN
NLDLNSFQVQYGSYTPEPTQDKTSESHVYNYIPPPVGSMCQNPIYMQKDGEQVAYYRNLK
ELSFGPLDAKKDVLTRSPGAYTISTMDFMDKSPTSCGLSTPEPPEMLYQNLGERPHKELP
TAAGAPPFHYNFCTLPKRPCIVPPYEAATARRHITNQDRLNKTVLYGTPRKYYGADHPSK
TMSTRFCSLGS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcggcgtcctcttgctgagcgtcctcacggtcaccagcctctcaacggagagc
cgcaaaacttcagcctccaaagagatctgcaagacccgctgcgcctgtgaggagcgggag
aacgttctgaacatcaactgtgagaataaaggatttacctccgtcagtcagttccaggcg
cccccgaataaaatctctcagctttttctcaatggaaactttctgtcacggcttagcgcc
aatgagtttgtcaattacggcaatgtcacctcactgcatctggggaataacggcttgcag
gagatccgaaccggagcgttcaacgggctgcgcttcctgaagcggctccacttgaacaac
aacaacctggaggtgattaaagaggactccttcacaggactggagagtttggagtattta
caggcagactataattatatcagcgccatagagccgggtgcttttagtaagctgaataag
ctcaaagtgttgatcctaaatgacaacctgctgttgtctttgcctcccaacattttccgc
ttcgtgctcctcacccacttggatttacgtggcaaccggctcaagatgctgccatttgcc
ggagttttagagcacatagggggcatcatggagatccagctggaggagaacccgtggaat
tgcacctgtgatctcattcccctcaaatcctggttggacactatttctgtcttcgtgggg
gacatagtgtgtgagacgccgttcaggctgcatggtaaagacatcacgcagctcataaag
caggacctgtgcccacgcaggaacgctggagaacgcgttcaccccccctccgactctcac
tttcagggggccctgcctccgacctaccatcccggcatgatcacccccacccgtgcccca
aaagcttcccgcccgcccaaaatgcgctacaggcccaccccgcgcatcacaaaggacaaa
catgtctttgggcccataatggtttaccagacgcgctcccctgtgcccatgttatgtccc
actgtgtgcgtgtgcacatcacagaaccctgacagcggattgaacatcaattgccaagag
cgaaagttgcacaacatcagcgagctgaaccccaagccctcctacccaaagaagctccac
ctgaccggtaactacttacaagtcatttacagaactgatctcaccgagtacagctcactg
gagctgcttcatttaggaaataataggatagcagtgattcgggaaggtgcattcgagaat
ctaaccaacctcagacggctctatctgaatgggaattacattgaatcacttactcaatcg
ctctttgctggcctgcagtcgctccagtatctgtatttggaatataacatcatcaaagac
attttaccacaaacatttaacgctctgcataaccttcagctgctctttctgaacaacaac
ctgttaaggtcgctccccgacaatgtttttgggggcaccatgctaacacgactcaacttg
aggaataaccatttctcctacctcgccgttcgaggggtcctagaccagctgtcagcgttt
atccagatcgacctgcaggagaacccctgggactgcacctgtgacattgttgcactcaag
aactggatggagctgtccagtaccagcgtagtggttaacgaaatcacgtgtgattccccc
tctaaacatgcaggtcgcctgctgcgctcacttcgcaacgaggccatctgccccgagccc
acccccacgataataagcccgggcaccgaggccaccacaccttcctcgtcttctttcagc
tcaatcagccccactgaatcccggatccacactccagagttgcaccccgaggtcccactg
tcagtcctgattctcggacttcttgttgttttcatcctgtcggtctgctttggagcaggc
ctctttgtttttgttctgaaaaggcgtaaaggagtggaacatgtccccacaggcgctaac
aacttagatctcaactctttccaagtgcaatatggctcctacactcctgaaccgacccaa
gacaaaacctccgaaagccacgtttataactacattcctccacctgtgggctctatgtgc
caaaaccctatttacatgcagaaggatggtgaacaggtggcatattatcgcaacctgaag
gagctcagttttgggcccctggacgcaaagaaggatgtcctcacccgaagcccaggggcc
tacaccatcagcacaatggattttatggataaatctccgacatcatgcggtttgagcacc
ccagagcctcctgagatgttgtatcaaaatttaggggagaggccccacaaagagcttccc
acggctgcaggcgcccctcctttccattacaacttttgcactttacctaagagaccttgc
atcgtgcccccctacgaggccgccacagcccggcggcacatcaccaaccaggacaggctg
aacaaaacggtgctgtacgggaccccgaggaagtactacggggctgaccacccttcaaaa
acaatgagcacccgcttctgctccctgggaagctaa
DBGET
integrated database retrieval system