Anoplopoma fimbria (sablefish): 129090323
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Entry
129090323 CDS
T09102
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129090323 (lsm11)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
129090323 (lsm11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSM
SLC12
Motif
Other DBs
NCBI-GeneID:
129090323
NCBI-ProteinID:
XP_054453910
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Position
4:complement(8523343..8527119)
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AA seq
339 aa
AA seq
DB search
MEERERRSEKSDSKDTKDSKDSKDPVAAGCSGPEHGADEAEKTDVCSDNFDPLLALYSPS
VPLPFPNIKGFNNVAAYESFMQGGRGRAKPENVQKKRLKAMKGVADPERIARLKKLIVNN
PVSEDGESSGAARRRRRDKPQKNVLTRMPLCKGSPLGELYRCVEEKIRVKVHIRTFKGLR
GVCSGFVVAFDKFWNMAMVDVDETYREPLLGEAFYHEKALTISRLFEKLKLQETPGGDEQ
PKKHEAQETASKHQPVNPKSTPKNPSAHPTSKTGDSGRESELSDAVKITQDKHRVSLKAR
GPEVRQKKDSQAYGKVHTRHINQLFIRGENVLLVNPQPL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagggaaagaagaagtgagaagtcagacagtaaagacactaaagacagtaaa
gacagtaaagacccggtagctgcaggctgctcagggccggagcacggggccgatgaggca
gagaaaacagacgtgtgctcggataacttcgaccctctcctggccttgtactcaccctct
gtcccgcttcccttcccaaacattaagggcttcaacaatgtggccgcctacgagagcttc
atgcagggcggccggggcagagccaagccggagaacgtgcagaagaaacgcctcaaggcc
atgaagggcgtggcggaccctgaacgcatcgccaggctgaagaagctgatcgtgaacaac
ccggtgtcggaggacggggagagcagcggcgcggcccggaggaggaggagggacaagccg
cagaaaaacgtcctgacaaggatgccattgtgtaaaggcagtccgctgggggagctgtac
agatgtgtggaggagaagataagggtcaaagttcacatcaggaccttcaagggactgagg
ggagtgtgctctggcttcgtcgtggccttcgacaagttctggaacatggcaatggtagat
gtagatgagacgtacagagagcctctgcttggagaggcgttctaccacgaaaaggccctc
accatctcacggctctttgagaagctgaagctccaggagaccccgggaggcgacgagcaa
ccaaaaaagcacgaagcccaggaaacagccagcaagcatcagcctgtaaaccccaaaagt
accccgaaaaacccgtctgctcacccgactagcaagacaggggacagcgggagggagtcc
gaactgtccgacgctgttaaaatcacacaggataaacacagagtctcgctgaaggcccgg
ggcccagaggtccgtcagaagaaagactcccaggcgtacggaaaggtccacacacgccac
atcaaccagctattcatccggggtgagaacgttctcctggtgaacccacagccactctga
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