Anoplopoma fimbria (sablefish): 129090359
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Entry
129090359 CDS
T09102
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129090359 (lingo2)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129090359 (lingo2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
ig
LRR_14
Ig_2
LRR_6
V-set
LRR_9
LRR_EndoS
LRR_LRWD1
C2-set_2
LRR_RPS2
DUF7617
Sp38
C2-set_3
Receptor_2B4
Ig_6
Motif
Other DBs
NCBI-GeneID:
129090359
NCBI-ProteinID:
XP_054453971
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Position
4:complement(20501524..20503365)
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AA seq
613 aa
AA seq
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MVDCMSKVMLHTVVSCWQPFLGLALVAVFVGSTLGCPSRCECTAQTKAVVCHRKRMPSIP
DGIPTETRILDLSKNKLTMINPDDFFVFPGLEELDLSGNIISYVEPGAFNALFTMHSLSL
KSNRIKLIPLGVFTGLTNLTRLDISDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLEMLTLERCNLTVVPTEALSHLHNLVSLHLRYLSISTLHSYSFKKLFRLRLLEI
DNWPALDHVPANTLHGLNLTALFITHTNLSSFPYQALKHLPYLTHLNLSFNRIRHIEGGM
LMELVRLQELHLVGTQLTTIEPYAFQGLRGLKVLNVSHNRLDTLEKGVFQSPEALEVLLI
DNNPLVCDCRLMWILQKRHSIFFGELQPECSTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENKTQTITVDEGQQAMLRCSAEGTPRPLVSWLSPRRRVLTSRSHGRVTVHNNGTLEIKS
AEVQDSGVYLCLASNSAGNDTLMTSLAVKSLGSLYANRTQYYTDPSNTTANGTAGVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDCAD
GQAGPRRFNMKMM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagcaaagtcatgctgcacacggtcgtctcatgctggcaaccattc
ctgggactggccctcgtggctgtctttgtgggttccaccctgggatgtccctcgcgctgc
gagtgtacagcgcagaccaaggcagttgtctgtcaccgcaagcgcatgcccagcatcccg
gacggcatcccgaccgagaccaggatcctggacctgagtaagaacaagctaacaatgatc
aaccctgatgacttttttgtctttccggggcttgaggaacttgacctcagtggaaatata
atcagttatgttgagcctggagcttttaacgccctgtttaccatgcactcactcagtctc
aagagcaatcgtatcaagctcattcctctgggcgtcttcacaggcttaacaaatctcacc
cgactggatataagtgacaacaagatcgtcatcctactggattacatgttccaggacttg
cacaatttaaagtttttggaagttggtgacaacgatctggtttacatttctcaccgtgcg
ttcagtggacttttaagcctggagatgctcaccttagaaaggtgcaaccttacagttgta
cccactgaggccctttcccacctgcataacctggtcagcctccatttacgatacctcagc
atcagcaccttgcattcttactcattcaaaaagctgttccggctgcggcttttagaaatt
gataattggcccgcactagaccacgtgccggccaacaccctgcatggcctcaacctgacc
gctctgttcataacacacaccaacttatcctccttcccttaccaagccctgaagcatctg
ccctacctgacacacctcaacctgtccttcaaccgcatcagacacattgaaggtgggatg
ctgatggaactggtacggcttcaagagctccatctggtaggaactcagctaaccaccatt
gaaccgtatgccttccagggccttcgagggctaaaagtcctcaatgtctctcacaaccga
ctggatacactggagaagggtgtttttcagtctcctgaggctctggaggttcttctgatt
gacaacaaccccttggtgtgtgactgtcgtctcatgtggatcctacagaaaaggcactct
atcttctttggggaattgcagccagagtgcagcacacctgaaggtattcgtggcaggcct
tttaaagagtttaaggagactctgctgtcttattacgtgacatgtaccaagccaaaaatt
cgagagaataaaacacagacgatcactgtggatgagggccagcaggcgatgttgcgctgc
agtgctgaaggaacaccaaggcccctggtgtcctggttgtccccccgtcgacgagttctg
acaagtaggagccatggaagagttaccgtccacaacaatggtacactggagatcaagtca
gcagaggtgcaagacagcggtgtgtacctttgccttgcgtccaacagtgctgggaatgac
accctaatgacttcattggcggtgaaaagtctgggatcactgtatgctaacaggacccag
tactacacagatcccagtaataccactgccaacggcacggccggtgtgaccctcggttta
gacctaaagactattttagtatcaactgctatgggttgtttcacattcctgggagtggtc
ttgttttgtttcctgctgcttttcgtttggagcagagggaaaggaaaacataaaaacaac
atagatgttgaatatgtgcctcggtcaaagtctaacggcactaacgttgactgcgcagat
ggacaagctggtcctcgtcgttttaacatgaaaatgatgtga
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