KEGG   Anoplopoma fimbria (sablefish): 129090359
Entry
129090359         CDS       T09102                                 
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129090359 (lingo2)
Membrane trafficking [BR:afb04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    129090359 (lingo2)
SSDB
Motif
Pfam: LRR_8 LRR_4 I-set Ig_3 LRR_5 ig LRR_14 Ig_2 LRR_6 V-set LRR_9 LRR_EndoS LRR_LRWD1 C2-set_2 LRR_RPS2 DUF7617 Sp38 C2-set_3 Receptor_2B4 Ig_6
Other DBs
NCBI-GeneID: 129090359
NCBI-ProteinID: XP_054453971
LinkDB
Position
4:complement(20501524..20503365)
AA seq 613 aa
MVDCMSKVMLHTVVSCWQPFLGLALVAVFVGSTLGCPSRCECTAQTKAVVCHRKRMPSIP
DGIPTETRILDLSKNKLTMINPDDFFVFPGLEELDLSGNIISYVEPGAFNALFTMHSLSL
KSNRIKLIPLGVFTGLTNLTRLDISDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLEMLTLERCNLTVVPTEALSHLHNLVSLHLRYLSISTLHSYSFKKLFRLRLLEI
DNWPALDHVPANTLHGLNLTALFITHTNLSSFPYQALKHLPYLTHLNLSFNRIRHIEGGM
LMELVRLQELHLVGTQLTTIEPYAFQGLRGLKVLNVSHNRLDTLEKGVFQSPEALEVLLI
DNNPLVCDCRLMWILQKRHSIFFGELQPECSTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENKTQTITVDEGQQAMLRCSAEGTPRPLVSWLSPRRRVLTSRSHGRVTVHNNGTLEIKS
AEVQDSGVYLCLASNSAGNDTLMTSLAVKSLGSLYANRTQYYTDPSNTTANGTAGVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDCAD
GQAGPRRFNMKMM
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggtcgactgtatgagcaaagtcatgctgcacacggtcgtctcatgctggcaaccattc
ctgggactggccctcgtggctgtctttgtgggttccaccctgggatgtccctcgcgctgc
gagtgtacagcgcagaccaaggcagttgtctgtcaccgcaagcgcatgcccagcatcccg
gacggcatcccgaccgagaccaggatcctggacctgagtaagaacaagctaacaatgatc
aaccctgatgacttttttgtctttccggggcttgaggaacttgacctcagtggaaatata
atcagttatgttgagcctggagcttttaacgccctgtttaccatgcactcactcagtctc
aagagcaatcgtatcaagctcattcctctgggcgtcttcacaggcttaacaaatctcacc
cgactggatataagtgacaacaagatcgtcatcctactggattacatgttccaggacttg
cacaatttaaagtttttggaagttggtgacaacgatctggtttacatttctcaccgtgcg
ttcagtggacttttaagcctggagatgctcaccttagaaaggtgcaaccttacagttgta
cccactgaggccctttcccacctgcataacctggtcagcctccatttacgatacctcagc
atcagcaccttgcattcttactcattcaaaaagctgttccggctgcggcttttagaaatt
gataattggcccgcactagaccacgtgccggccaacaccctgcatggcctcaacctgacc
gctctgttcataacacacaccaacttatcctccttcccttaccaagccctgaagcatctg
ccctacctgacacacctcaacctgtccttcaaccgcatcagacacattgaaggtgggatg
ctgatggaactggtacggcttcaagagctccatctggtaggaactcagctaaccaccatt
gaaccgtatgccttccagggccttcgagggctaaaagtcctcaatgtctctcacaaccga
ctggatacactggagaagggtgtttttcagtctcctgaggctctggaggttcttctgatt
gacaacaaccccttggtgtgtgactgtcgtctcatgtggatcctacagaaaaggcactct
atcttctttggggaattgcagccagagtgcagcacacctgaaggtattcgtggcaggcct
tttaaagagtttaaggagactctgctgtcttattacgtgacatgtaccaagccaaaaatt
cgagagaataaaacacagacgatcactgtggatgagggccagcaggcgatgttgcgctgc
agtgctgaaggaacaccaaggcccctggtgtcctggttgtccccccgtcgacgagttctg
acaagtaggagccatggaagagttaccgtccacaacaatggtacactggagatcaagtca
gcagaggtgcaagacagcggtgtgtacctttgccttgcgtccaacagtgctgggaatgac
accctaatgacttcattggcggtgaaaagtctgggatcactgtatgctaacaggacccag
tactacacagatcccagtaataccactgccaacggcacggccggtgtgaccctcggttta
gacctaaagactattttagtatcaactgctatgggttgtttcacattcctgggagtggtc
ttgttttgtttcctgctgcttttcgtttggagcagagggaaaggaaaacataaaaacaac
atagatgttgaatatgtgcctcggtcaaagtctaacggcactaacgttgactgcgcagat
ggacaagctggtcctcgtcgttttaacatgaaaatgatgtga

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