Anoplopoma fimbria (sablefish): 129090375
Help
Entry
129090375 CDS
T09102
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129090375 (trim59)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129090375 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
BAR_3_WASP_bdg
Spectrin
MgrB
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
129090375
NCBI-ProteinID:
XP_054453993
LinkDB
All DBs
Position
1:20525730..20530625
Genome browser
AA seq
430 aa
AA seq
DB search
MDNLEEDLTCSVCYSLFSDPRVLPCSHTFCKNCLDNLLQVSTNYSIWRPLRLPLKCPNCR
SVVELPPMGVDSLPTNVSLRAIIEKYQSDSEPRHPSCQEHHRQPLNMYCIQDRQLICGLC
LTVGQHQGHPIDDLQAAFIREKQTPSRLLARLSEQRWAQVCELGEQLEQEKARCEGVVRQ
DRQEVNQFFQTLEVVLARKRHAYLEALDKAGAEVSRAYDPLIHRVKALQEEQLDLVSVGS
SVEEEDSPLVFLEQVHLFRERVEEFIKTPLPSVINLSVTPRAAEHLQQHWPAVTIGSLEE
APVPKVCCCARCGGVETEDEGRNQSDSWVQNLWWELQPTFSVVLLGLLLLLMALWVNPVG
GASLGFSLLSQFSQLVHGLSSELITSVWDTAGSAYTVMEASVERWSSHLSSVGEKASQQL
AALFKTLTSH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctagaggaggacctgacgtgctctgtgtgctactctctgttctctgacccg
cgggtcctgccgtgctcacacaccttctgtaagaactgcctggacaacctgctccaggtg
tccaccaactactccatctggcgtccactccgcctgccgctaaaatgccccaactgccgc
agcgtggtggagctgcccccgatgggcgtagactctctgcccaccaacgtctctctgcga
gccatcatcgagaaataccagagcgacagtgagccgcgacacccctcctgtcaggagcac
cacaggcagcctctgaacatgtactgcatccaggatcgccagctgatctgtgggctgtgt
ctgactgtcgggcagcaccagggccatcccatagatgaccttcaggcagcgttcatcaga
gaaaaacagactccatcgcggctgctggccagactctctgagcagagatgggcacaggtg
tgtgagctgggggagcagctggagcaggagaaggcccgctgtgagggtgtagtgaggcag
gaccgacaggaggtcaatcagttttttcagactctggaggtggtgctggccaggaagaga
cacgcctacctggaggccctggacaaagctggtgcagaggtgtcccgggcttacgaccca
ctcattcacagagtgaaggcgctacaggaagaacagttggacctggtgtccgtgggttca
tcagtggaggaggaggactcaccgctggtcttcctggagcaggttcatttgttcagagag
agggtggaagagtttattaaaacccctctgccctcggtgattaacctctccgtcactccg
cgggcggcggagcacctgcagcagcactggcccgctgtgactatcggcagcctggaggaa
gcacctgtccctaaggtgtgctgctgcgccagatgtggcggcgtggaaactgaagatgaa
ggaaggaatcagtccgacagctgggtgcagaacctgtggtgggagctgcagcccactttc
tcggtggtgctgctggggctgctgctgctgctcatggcgctatgggtcaacccggtcgga
ggggcgtcgctcggtttctctctgctctctcagtttagtcagctagtccacggcctgagc
agtgaactgatcacatctgtctgggacacggcggggtcagcatacacagtgatggaggcc
tctgtagaaagatggagctctcacctctcctcagtgggtgaaaaggcctcccagcagctg
gctgccttatttaaaactctgacatcccactga
DBGET
integrated database retrieval system
