Anoplopoma fimbria (sablefish): 129090387
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Entry
129090387 CDS
T09102
Name
(RefSeq) vesicle transport protein SEC20-like
KO
K08497
protein transport protein SEC20
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129090387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129090387
Membrane trafficking [BR:
afb04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
129090387
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
SPATIAL
Motif
Other DBs
NCBI-GeneID:
129090387
NCBI-ProteinID:
XP_054454005
LinkDB
All DBs
Position
4:8615389..8617778
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AA seq
228 aa
AA seq
DB search
MASSDVHVRICEQEILKYDLEIKALIQDVTECTGPQSKLTELNADVKKSFHNLRLRIQDF
EQIAMEQDKESDKQALISQVDGHRKQMLSNQTGWRKANLASKLSIDNMEKQALLHGAEGG
LRQRKMTKEGLAQTTSDITENLMSISRMMAQQVQQSEETMTSLATSSRTIQETNEEFKTM
TGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcagacgtccacgtccgaatatgtgaacaagaaatcctcaaatatgacctg
gaaatcaaagctctcatccaggacgttactgagtgcacaggccctcaaagcaagctgaca
gagctgaacgcggatgtgaaaaagagtttccacaatctcaggttgcggattcaggatttt
gagcagatagctatggagcaggacaaagagtcagacaagcaagctctgatcagtcaggta
gacggacacagaaaacagatgctgagcaaccagactggttggaggaaagccaacctggcc
agcaaactgtccatagacaatatggaaaagcaggcacttcttcatggagcagaaggtggt
ttgagacagaggaagatgaccaaagagggtctggcccagacaaccagtgacattacagag
aatcttatgagcatcagccggatgatggcgcagcaggttcagcagagtgaggagaccatg
acgtcactagcaacctcctcaaggacaatccaagagaccaatgaggagtttaagaccatg
acgggaaccatccagctcgggaggaaactcatcaccaagtacaaccgcagagagctcact
gacaaactgctcatcttcctggcgctcgccctcttcctcgccacagttctctacatcctc
aagaagagactgttccccttcctatag
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