Anoplopoma fimbria (sablefish): 129090416
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Entry
129090416 CDS
T09102
Symbol
vegfba
Name
(RefSeq) vascular endothelial growth factor A-A
KO
K05448
vascular endothelial growth factor A
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04370
VEGF signaling pathway
afb04510
Focal adhesion
afb04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129090416 (vegfba)
04370 VEGF signaling pathway
129090416 (vegfba)
04020 Calcium signaling pathway
129090416 (vegfba)
09133 Signaling molecules and interaction
04518 Integrin signaling
129090416 (vegfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129090416 (vegfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129090416 (vegfba)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129090416 (vegfba)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Growth factors (RTK binding)
129090416 (vegfba)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Growth factors/receptors
129090416 (vegfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
Motif
Other DBs
NCBI-GeneID:
129090416
NCBI-ProteinID:
XP_054454038
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All DBs
Position
4:complement(15728709..15742884)
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AA seq
265 aa
AA seq
DB search
MGIMLQVILGMFQFLLLTRIPTSHAKLAHWRPADSPKSREGREVRRWLEVYSRSGCEPRD
TLVEVWRELPGETHHLFVPSCVSVRRCGGCCSDEALECYPSLTHTITMELMRTSFMKHEL
IELSFVEHSQCECRLKEQIQPTPTTRPYLKPTRTDKKKERGKSRQKTSGAIGAATHAPPR
LPPPSSPPPPSSPPPTSPRPPSHPPTSISPSPSPSPTPRCRPCRGRKWALDATSCQCHCT
IRAESCSRKDRMLNVRRCRCDAMRT
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggggattatgcttcaagttattctaggaatgtttcaattcctcctgctaaccagaata
ccgacatcccatgccaagcttgctcactggcggccggcagactccccaaaatccagggaa
ggtcgagaagtgcggcggtggttggaggtttattcacgcagcggctgcgagcctcgggac
actctggtggaggtctggagggagttgccaggggagacgcaccatctcttcgtcccgtcc
tgcgtgtcggtgaggcgatgtggcggctgctgttcggatgaggccctggagtgttatccc
tcgctcacacacacaatcaccatggagctgatgagaacctccttcatgaaacatgagctc
attgagctgtcattcgtcgagcacagtcagtgtgagtgcaggttaaaagaacaaatccag
ccaacacctacaacaaggccctatctgaagccgacaagaacagacaagaaaaaggagaga
ggaaagtccagacagaagacaagtggagccatcggagctgcgacccatgctcccccacgt
cttcctcccccatcctctcctcctcccccatcctctcctcctcctacatcacctcgtcct
ccatcacatccaccaaccagcatctctccctctccgtcgccgtctccgacacctcgttgc
cgcccctgcagagggaggaagtgggcactggatgcgacgtcttgccagtgccactgcacc
atcagagctgagagctgcagccggaaagaccgtatgctcaacgttcgccgctgtaggtgt
gatgccatgaggacttga
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