Anoplopoma fimbria (sablefish): 129090419
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Entry
129090419 CDS
T09102
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129090419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129090419
Transporters [BR:
afb02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
129090419
SSDB
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Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
129090419
NCBI-ProteinID:
XP_054454040
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Position
4
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AA seq
556 aa
AA seq
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MSLNVPGIVVMVLFYLLVLGTGILASLKTKRLKKNSQGDQTEITLLGNRGISLAVGVFTM
TATFVGGGFIVGLTEVVYDPTMGLTWGVMPAGIAVAFIVGGLFFAKKMRDKRYVTMMDPF
QIKYGNVVSAVLSVALLISDVIWVTGTLIGLGGTMSVVLDLPYSVCIWISASVAIIYTLM
GGLYSVAYTDIIQLTLIFIGLWLCVPFIFMSPHSTDITKTAFNFTYQAPWMGSVDIDNAW
RWIDNLFLLTFGNLGCQAFHQRTLSAASSEKARLSCFIAAPLILILGIPSALIGAVAAST
DWNMTAYGSPSPFERGEASQVLPIALQQLTPDYISIIGIGAIAAAVMSSIDSALLSAASI
FTYNIYKNIVRTTASDQELQWVIRATVVSVGIAGTTLTFVHNSIMFFWILGTGITYTIIF
PQLVCVLFFQISNGYGSIVGFFVGVLLKVLSGEPIIGLPIVLHFPGCTLENGEYVQYSPV
HTICMLSNMFATLLFSYLASLLFNRGLIPERWDVFKVKTPKLPKKKTLVSCTTKTDEEKP
EVHNEMVIMLTTSQQD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaacgtcccgggaatagtggtgatggtgctcttctacctgctggtgctgggc
accggcatcttggcctccttgaagaccaagcggctgaagaagaacagccagggtgaccaa
acagagatcactctgctgggcaacagagggatcagcctggcggtgggagtcttcaccatg
acagctacatttgttggagggggcttcattgttggtttgacagaggtagtgtacgatcca
actatgggactgacgtggggtgtcatgccggccggaatagccgtggctttcattgttggg
ggactttttttcgccaagaagatgagagacaaaagatatgtgacgatgatggacccgttc
cagataaagtacggaaatgtagtaagtgcagttctgtcggtggcactgctgatatccgac
gtaatctgggttacaggaactctaattggtttaggtggaacaatgagtgttgtcctggat
ttgccctattctgtttgcatttggatctctgcttcagtagccatcatctacacactgatg
ggaggcctctactctgtcgcctacacagacatcatacagttaaccctcatattcattggt
ttgtggttatgtgtccccttcatctttatgagcccccattcaacggacatcaccaagact
gctttcaacttcacctaccaggccccctggatgggttcagtggacatagataatgcgtgg
aggtggattgataatttatttttattgacattcggtaaccttggatgtcaggccttccac
caaaggacgctgtcagctgcctcatcagagaaagccaggctctcctgttttattgcagct
cccctcatcttaatactcgggatcccatccgcgttgattggagcagtggcagcatccaca
gattggaacatgaccgcgtacggctccccgtcaccattcgagcgtggagaggccagtcag
gtcctgcccattgctctgcagcagctcactccagactacatctccatcatcggtatagga
gctatagctgctgcggtgatgtcatcgatagactcggccttattgtctgctgcctccatc
ttcacatacaatatctataagaacattgtgagaactacggcatcagatcaagagctccag
tgggtgatccgtgccaccgtggtgtcggtgggcatagctggcaccacgctcaccttcgta
cacaacagcattatgtttttctggatcctgggcacaggcatcacctacaccatcatattc
ccccaactcgtctgcgtcctcttctttcaaatctcaaatggctacggctccatcgtgggc
tttttcgttggagtgttgctgaaggtgctgagtggcgagccaataatagggttgcctatt
gttctccacttcccaggttgcacacttgagaatggtgaatacgtgcagtactctcctgtt
catactatctgcatgttgtccaacatgtttgctactttgttgttctcctacctagcttca
ctgctcttcaatagaggactgattcctgagaggtgggacgtatttaaagtgaaaaccccc
aaactgccaaagaaaaaaacgctagtgagttgcaccaccaaaactgacgaggagaaacct
gaagttcataatgagatggtaataatgttgactacaagtcagcaggattga
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