Anoplopoma fimbria (sablefish): 129090441
Help
Entry
129090441 CDS
T09102
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129090441
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129090441
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129090441
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afb04090
]
129090441
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129090441
Protein kinases [BR:
afb01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
129090441
CD molecules [BR:
afb04090
]
Proteins
129090441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
C2-set_2
Ig_VEGFR-1-like_5th
Lin-8
Motif
Other DBs
NCBI-GeneID:
129090441
NCBI-ProteinID:
XP_054454067
LinkDB
All DBs
Position
4:complement(12150848..12160030)
Genome browser
AA seq
977 aa
AA seq
DB search
MQSYLALLLGIVASAASAEWRRPVIKFNSKVLENSELVVRPGTPLDLRCEGDGPVNWQTR
LAKHRRFVSKGNGRVRTLKVERPSAEFTGTYKCVYTAGSQQLSSSVHVYVKESNRAFWTS
STSLRVVKKEGEDYLLPCLLTNPTATDLGLRMDNGTSVPPGMNFTVYRHRGILIHRLHPS
FNADYVCTARVNGVEMFSKAFSIYVIQKLRFPPYVLLETDEYVRIVGEELKIRCTTHNPN
FNYNVTWKYTTKSKPTIEEKVRSSGENRLDIQSILTILTVDLTDTGNISCIGTNEAGVNS
STTYLLVVDKAYIRLLPQLSPKLAHKGLSVEVNEGEDLELTVLIEAYPHITEHRWHTPTS
PNTSTQEHKLIRYNNRYHATLQLKRMNAKEQGKYTFYAESNLANASVTFQVQMYQRPVAV
VRWENITTLTCTSFGYPAPRIIWYQCFGIRPTCNENTTWLQLAIPLTAPTVEVQREEYGA
VEVESVLTVGPSSRRMTVECVAFNLVGVSSDTFAMEVSDKLFTSTLTGAAGILAILLVLL
VFLLYKYKQKPRYEIRWQIIEARDGNNYTFIDPTQLPYNEKWEFPRDKLKLGKILGAGAF
GKVVEATAYGLGMEDNALRVAVKMLKASAHSDEREALMSELKILSHLGHHKNIVNLLGAC
TYGGPVLVITEYCSLGDLLNFLRQKAETFENFVMSVPDIMEESNDYKNVSSERQFIRSDS
GISSTSSSSYLEMRPSKVPNVESSPDSVCEETGDWPLDIDDLLRFSFQVAQGLDFLAAKN
CIHRDVAARNVLLTDRRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFECVYT
IQSDVWSYGILLWEIFSLGKSPYPSVAVDSRFYKMVKRGYQMCQPNFAPAEIYMIMKMCW
NLEPTERPTFSKISQMIERLLGEQPEQEKLIYQNLQQQVTEGEECDKPKCCDGPCDQSCD
HQEEEQPLMKTNNYQFC
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctacctcgctctgctgctggggatcgtggcctctgctgcttcagccgaatgg
aggcgtccagtgatcaagttcaactctaaggtgttggagaattctgagttggtggtcaga
cccgggacccctttggatctgaggtgtgagggcgacgggcctgtaaactggcaaacgagg
ctagccaaacacagacgcttcgtgtccaagggcaacgggagagtccgcaccttaaaggtg
gaacgtccctctgcagaattcactggaacatacaagtgtgtttacactgctggttcgcag
caactcagctcctcagtgcatgtgtacgtaaaagagtcaaaccgtgcattctggaccagc
agcacgtccctgcgggtggtgaagaaggagggtgaggactacctgctgccctgcctgctg
accaacccgacagccacagacctgggcctccgcatggacaacggcacctccgtgccaccg
ggcatgaactttacagtttaccggcaccgtggcattctcatccacaggctccaccccagc
ttcaatgccgactatgtctgcacagccagggtcaacggagtggaaatgttctccaaggcc
ttttccatctatgtcattcagaagcttcgtttccctccatacgtactcttggagacagat
gaatatgtgcgcattgttggggaggaactcaagattcgctgcacaacacacaaccccaac
ttcaactacaatgtcacttggaagtacaccaccaagtcgaaaccaaccatagaggagaag
gttcgttccagtggagaaaatcgcctggacatacagagcatactgaccatcctgactgtg
gaccttacagacacaggaaacatttcctgcattggcactaatgaagcaggggtgaacagt
tcaacgacatacctgctggttgtagacaaggcctacatcaggctgttgcctcagctctcc
cctaaactagcccacaagggtctttcagtggaggtgaacgagggagaagacctggagctg
accgtgctcatcgaagcgtaccctcacatcacagagcacagatggcacaccccaacatct
cccaacacgtccacacaggagcacaagctcatcagatacaacaacagataccatgccact
ctgcagctgaagagaatgaatgcaaaggagcaggggaaatacaccttctacgccgagagc
aatttggccaatgcatccgtcacattccaagtccaaatgtatcagagaccggttgctgtg
gtgagatgggaaaacataaccacgctcacttgcacctcatttggctatcctgcccccaga
atcatctggtaccagtgttttgggatacgacccacgtgcaatgaaaacaccacttggctg
cagctggcgatccctctcacggctcccacagtggaggtccagagggaggagtacggggct
gtggaggtggagagcgtcctcaccgtggggccgtccagccggaggatgacggtcgagtgt
gtggccttcaaccttgtgggcgtcagcagcgacacttttgccatggaggtttctgacaaa
ctcttcacttccaccttgactggagcagcaggcattctggccatcctccttgtgctactg
gtttttctattatacaaatataagcagaaacccaggtatgagatccgctggcagatcatt
gaggcaagagatggaaacaactacaccttcattgaccccacacagctgccttataatgag
aagtgggagttcccaagagacaagttgaagctagggaagatcctgggtgcaggagctttt
ggaaaggtcgttgaggccacagcttatggtctgggaatggaagacaatgcgttgcgtgta
gctgtgaaaatgttaaaagccagtgcccattcagatgaacgggaagctctgatgtctgag
ctgaagatcctaagccacctgggacaccacaagaacatcgtcaatctactgggagcctgc
acttatggaggaccagtgcttgtgatcacagagtactgcagcctcggcgacctcctgaac
ttccttcgccagaaggcagagacgtttgagaactttgttatgagcgttcccgacattatg
gaggaatcaaatgactacaagaacgtcagcagtgagagacagttcatcagaagtgacagt
gggatctccagtacatcttcaagcagttacttagagatgagacccagcaaggtaccgaat
gtggaatcatctccagactctgtgtgtgaggaaactggcgactggccgcttgacattgac
gacttgctgaggttttcctttcaagtggctcagggccttgactttctggctgccaaaaac
tgtattcatagagacgtggctgctaggaatgtcctcttgaccgaccgaagagtggccaag
atttgtgactttggcctggcacgtgacatcatgaatgactccaactacgtggtgaagggc
aatgcccgtctgccagtgaagtggatggctccagagagcatctttgaatgtgtctacacc
atccagagtgacgtctggtcctacggcatcctcctgtgggagatattctctttaggcaag
agcccttaccccagtgtggccgtggactccaggttttacaagatggtgaagcgcggctac
cagatgtgccaacctaactttgccccggctgagatctacatgatcatgaagatgtgctgg
aatctggagccaacagagcgtccgacgtttagcaagatcagtcagatgatagaaagacta
ctcggggaacaacctgagcaggaaaaactaatctaccagaatttgcagcagcaagtcaca
gagggtgaagagtgtgacaagcccaagtgctgcgacggcccctgtgaccagtcttgtgac
caccaggaagaggagcagcctctgatgaagaccaataactaccagttttgttga
DBGET
integrated database retrieval system
