Anoplopoma fimbria (sablefish): 129090464
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Entry
129090464 CDS
T09102
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00061
Fatty acid biosynthesis
afb00071
Fatty acid degradation
afb01100
Metabolic pathways
afb01212
Fatty acid metabolism
afb03320
PPAR signaling pathway
afb04146
Peroxisome
afb04216
Ferroptosis
afb04920
Adipocytokine signaling pathway
Module
afb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
129090464
00071 Fatty acid degradation
129090464
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129090464
09143 Cell growth and death
04216 Ferroptosis
129090464
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129090464
03320 PPAR signaling pathway
129090464
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
afb01004
]
129090464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129090464
Enzymes [BR:
afb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
129090464
Lipid biosynthesis proteins [BR:
afb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
129090464
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of breast milk
129090464
Exosomal proteins of breast cancer cells
129090464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
129090464
NCBI-ProteinID:
XP_054454092
LinkDB
All DBs
Position
4:complement(1193757..1210810)
Genome browser
AA seq
698 aa
AA seq
DB search
MLSQDFLRKLKLPDLDDVRHYIRNVPTPMLVSMGAVAAATTYYLATRPKALPPVCDLCMQ
SVEVPGGELARRSVLLNGVAQMTHIYEDARTLYEFFLRGVRVSNNGPCLGSRKPKQPYEW
LSYREVMERTENLGSAFLHKGHSKTTDPHVGIFSQNRPEWTISELACYTYSLVSVPLYDT
LGTEAIGYIIDKASISTIMCDVVDKANLVLDCVRDKEHSVKTIVLMENPGADLVNRGQQA
GIHILSLQEMEAIGKANHQQPVPPRPEDMALICFTSGTTGNPKGAMLTHRNVVSNCSAFI
KMTEVSCPLLPSDVHISFLPLAHMFERVVQGVMIVHGARIGFFQGDIRLLSDDLNALKPT
VFPVVPRLLNRMYDKIFGQADSFLKRWLLGFACRRKEAEMRKGIVRRDSIWDRLIFRKVQ
ASLGGRVRLMLTGAAPISPTVLTFLRAAVGCQFYEGYGQTECTAGCTMTMPGEWNAGHVG
APLPCNSLKLVDVPEMNYLAVNGEGEVCVKGPNVFQGYLKDPEKTAEAIDADGWLHTGDI
GKWLSNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYNRGDAVAQVFVHGDSLQACLVAVV
VPDPDFLSNWTKRTLGLEGSYQELCGRAEVKAAIFKDMVRLGKEGGLKSFEQVKTIYIHT
ELFSIENGLLTPTLKAKRNEMRQYFRAQIDELYAGIKM
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccaggacttcctgcggaagctgaagttgccagatctggatgatgtcaggcat
tacatcaggaatgtgcccaccccgatgttggtcagcatgggggcagtggctgctgccaca
acctactacctggctacccgtcccaaggccctcccaccagtctgcgacctctgtatgcag
tcagttgaggttccgggtggagagttggcacgtcgatcagttctgttgaacggagtcgct
cagatgacacatatttacgaagatgccagaacgttgtatgagttcttcctcagaggggtc
cgagtctccaataacggtccctgtctgggatccaggaaacccaaacagccgtatgaatgg
ctgtcctacagagaggtaatggagcgaacagagaatctgggttcagcatttcttcacaaa
ggacactccaagaccacagacccccacgttggcatcttctctcagaacagacctgagtgg
accatcagtgagctggcatgctacacctattctctggtgtcagtccctctctacgacaca
ctgggaacagaagccatcggctacatcatagacaaagcttccatctcgaccatcatgtgc
gacgtggtagataaagccaacctggtcctggactgtgtcagggacaaggagcactctgtg
aaaaccatcgttctgatggagaaccccggagccgacctggtcaacaggggccagcaggct
ggaatccacatcctcagcctgcaggagatggaggctatcgggaaggccaaccatcaacaa
ccagtgcctccgcgacctgaggacatggctctcatctgcttcaccagtggaacaacagga
aatccaaagggagctatgttgacacatagaaatgttgtgtccaactgctcagccttcatc
aaaatgacagaggtttcctgtccattgttacccagtgatgtccatatttccttcctgccc
ctggctcatatgtttgagagagtagtccagggagtgatgatagtgcatggagccaggatt
ggctttttccagggagatattcgcttgctgtcagatgacctgaatgcactgaaacccact
gtgtttcctgtggttccccgactgctaaacagaatgtatgataagatctttgggcaggct
gacagcttcctgaagcgctggctgctgggattcgcctgcaggaggaaggaggcagagatg
aggaaaggcatcgtgaggagagacagtatctgggatcgactcatcttccggaaggttcag
gccagcctcggaggtcgcgtgcggctcatgctgacaggagctgctcccatctctcctact
gtgctcaccttcctcagagctgcagtaggctgtcagttctatgaaggttatggacaaacc
gagtgcactgctggatgcaccatgaccatgcccggggagtggaacgcaggtcacgtcgga
gctcctctgccctgtaactcacttaaactggtggacgtgcccgagatgaactacctggct
gtaaacggggagggagaggtgtgtgtgaagggccccaacgtgttccagggctacctgaag
gaccccgagaagactgcagaggccatcgatgcagatggatggcttcatacaggagacatt
ggaaaatggctttctaatggcacgctgaagatcgtggacaggaagaaacacatctttaaa
ttggcacagggggagtacatcgctcctgaaaagatagagaacatctacaataggggggat
gcagtggcgcaggtctttgtgcacggagacagtctacaggcatgtctggtagcagtggtg
gttcctgaccccgacttcctgtctaactggaccaagaggaccctgggactggagggcagc
taccaggaactatgtggcagagcggaagtcaaggcagccatcttcaaagacatggtgcga
ctgggcaaggaaggaggcctcaagtcctttgagcaggtgaagaccatctacatccacacc
gagctgttctcaatagagaacggcctgctcactccaacgctgaaggccaagaggaacgaa
atgcgacaatacttcagagcccagatagacgagctgtacgctgggattaaaatgtag
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