KEGG   Anoplopoma fimbria (sablefish): 129090483
Entry
129090483         CDS       T09102                                 
Name
(RefSeq) uncharacterized protein LOC129090483
  KO
K16669  protocadherin Fat 4
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:afb04515]
    129090483
Cell adhesion molecules [BR:afb04515]
 Cadherins
  Cadherin related
   129090483
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th 7TM_GPCR_Sri RET_CLD1 GPR180-TMEM145_TM He_PIG
Other DBs
NCBI-GeneID: 129090483
NCBI-ProteinID: XP_054454110
LinkDB
Position
4:13125828..13138847
AA seq 2857 aa
MDILKRKGTSSDWRVSILLFCLVAAVGGQIRYSIPEEMRKGLFVGDVAKDLGLDVKRLVS
GRARLVIDEDNQYVALNQNKGHIVVNERIDREQLCAKKSPCSFSLEIVLEDPLELFSITI
EIQDVNDHAPSFPNKEINLEISESTPTGTVFLLDSAADPDVGINSLQTYSLKENRHFVLK
QHTRTDGSKYAEMMLQSALDREQQSDHALILTAVDGGEPQRSGTVKIHVAVLDANDNAPV
FTQSVYKASVLENVLRSTVIAKVSAVDADQGYNSNVTYYFTHLGEDSSCPFEINTYTGEV
KLTGDIDYEASPNYEINLQAKDPWGVVGASKLIIDIADVNDNSPIITMASYSGKISEDSL
PGTVVALISVQDKDSGKNGQINLNIDENLPFKIKSSLRNYYTLVTEQILDREKRSKYNIT
LTATDEGLPALSSRKTVALDVTDINDNAPTFSQRVYSTQVMENNSPGVALLQIHATDPDQ
GQNARISYFLIDGEVNGNPVSTYFSINTESGVIQSLRSLDFEQVKEYKIRVQAQDGGSPP
LNSNTTVIVRVQDQNDNPPQVLYPVQTGGSLVAELVPRSADVGYLVTKVVAVDVDSGQNA
WLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVIVNV
AVADSFPEVLSEFTDFTQDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQSR
VMYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDIKYVQPMSQSLVSVDD
AGTETLQNGEQPSAVSQMSTLAQIRYSIPEEMKKGSLVGNIAQDLGLDLKRLRSGRARIV
TGENIQYVELKADKGTLVVHERIDREQLCGEIADDADVGENGLQNYILSPNDNFVLKQHV
NPDGSKYAEMVLQKPLDREEQPRLSLKLLAVDGGNPQRSESGVLHAVRSFDYEQIKQLVF
TIKAQDGGSPPLSSNVTVKVMIQDQNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVTKV
VAVDVDSGQNAWLSYRLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQ
PSRSATVIVNVAVADSFPEVLSEFTDFTQDKEYNDNLTFYLVLALAVVSFLFITCLVVII
SVKIYRWRQSRVMYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGQ
AGSQNVLIMDPSSTGTMQRIQSERSILDEPDSPLESILQLTVQSFYGLRRQIGLLMLLFH
AVNMVGGQIRYSIPEEMKKGSVIGNVAQDLGLDLRRLRSGRARIVTGESIHYTELKSDKG
ILVVNERIDREQLCGDVTPCSFSFEVILENPMELHRITVEVLDINDHAPVFPNKDKPIGF
EIGESAAVGVQFPLQSAEDLDVGQNALQDYVLSPNENFILKQHANPDGSKYVEMVLQKPL
DREQHPHLSLKLIAVDGGTPQRSGTVNIDVTVLDVNDNAPVFNQSVYKASVMENTTKGTS
IITVNATDADSGSNGVITYSLSKMKGSAGNVFSIDENTGTVSVSGQIDYEKDRKYEVRVE
AKDHGGLTGTSKITFDVFDVNDNAPVINIMSFSSPVSEDARPGTTVAILNIKDADSENNG
QIKCSIDGKLPFKIESSLTNYYNLISDQYFDRESVSEYNITITATDMGSPPLSSSTKLHL
KISDVNDNAPLFDKKSYSAYITENNSPGISIFAVSARDSDWNQNARISYILEDTQVSGSP
VSTYISLNSETGVLSAVRSFDYEQIKQLQLVVKAQDGGSPPLSSNVTVKVMIQDQNDNPP
QVLYPVQTGGSLVAEMVPRSADVGYLVTKVVAVDVDSGQNAWLSYKLQKATDRALFEVGL
QNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVIVNVAVADSFPEVLSEFTDFTQD
KEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQSRVMYHSNLPVIPYYPPRYSD
TLGTGTLQHVYNYEVCRTTDSRKSDCKFGIAGSQNVLIMDPSSTGTMQRIQSEKSILDEL
DSPLESILQLTVQSFYGLRRQIGLLMLLFHAVNMVGGQIRYSIPEEMKKGSVIGNVAQDL
GLDLRRLRSGRARIVTGESIHYTELKSDKGILVVNERIDREQLCGDVTPCSFSFEVILEN
PIELHRITVEVLDINDHAPVFPNKDKPIGFEISESATIGVQFPLQSAEDLDVGQNALQDY
VLSPNENFILKQHANPDGRKYVEMVLQKPLDREQHPHLSLKLIAVDGGTPQRSGTVNIDV
TVLDANDNVPVFNQSVYKASVIENTTKGTSIITVNATDADSGSNGLITYSLSKMKGSAGN
VFSIDENTGTVSVSGQIDYEKDKKYEVRVEAKDHGGLTGTSKITFDVFDVNDNAPVINVM
SFSSPVSEDSRPGTTIAVLNIKDADSENNGQIKCSIDGKLPFKIESSLTNYYNLISDQYF
DRESVSEYNITITATDMGSPPLSSSTKLHLKISDVNDNAPLFDKKSYSAYITENNSPGIS
IFAVSARDSDWNQNARISYILEDTQVNGSPVSTYVSLNSETGVLSAVRSFDYEQIKQLQL
VVKAQDGGSPPFSSNVTVKLMIQDQNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVTKV
VAVDVDSGQNAWLSYRLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQ
PSRSATVIVNVAVADSFPEVLSEFTDFTQDKEYNDNLTFYLVLALAVVSFLFITCLVVII
SVKIYRWRQSRVMYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGQ
AGSQNVLIMDPSSTGTMQRIQSERSILDELDSPLEVS
NT seq 8574 nt   +upstreamnt  +downstreamnt
atggatatactgaagcgcaaaggcacctcatcggattggagagtctccattttgcttttc
tgccttgttgctgcggttggcggacagattcgttattctataccagaggagatgagaaaa
gggctgtttgtcggagacgttgcaaaagacctgggcttggatgttaaaaggttggtttct
ggtcgggctcgacttgttatagatgaagataaccaatatgtcgcactgaaccagaacaaa
gggcatattgttgtcaatgagagaatagacagagaacaattatgcgccaaaaaatcaccg
tgcagctttagtctagaaattgtcctcgaagatccacttgaattattttccataaccatc
gaaatacaagatgtgaacgatcatgctccgtcttttcccaataaggagattaatttggaa
ataagcgaatccacgccaaccgggacagtattcctgcttgatagcgcagctgaccctgac
gtaggaataaactcactgcaaacttactctttaaaggaaaatcgtcattttgtcctcaaa
caacatactcgcacagatgggagtaaatatgctgaaatgatgcttcagtctgctttggac
cgcgagcagcaaagcgatcacgcgcttatattaacggctgtagatggcggggagccgcag
agatctgggaccgtaaagatacatgtagctgttctggacgcaaacgacaacgcacccgtt
tttacacagtccgtttacaaagcatctgtcttggaaaatgttttgcgaagcacagttatt
gctaaggtcagtgctgtagatgcggaccaaggttataatagtaacgttacatattatttc
actcacttaggggaggattcgtcctgtcctttcgaaataaatacttacaccggagaggtt
aaactcaccggtgacattgattacgaggcttctccaaattacgaaataaaccttcaagca
aaagacccatggggcgtagtgggcgccagcaaattaataatagacatagcagatgtgaat
gacaacagtccaataatcacaatggcttcctattcgggtaaaatttcagaggattccctt
cctggcacggttgtggcgttaatcagtgttcaggataaagattccggtaaaaatggtcag
attaatttaaatattgatgaaaatctaccgttcaaaattaaatcgtctctcagaaactat
tacacattggtcacggagcaaatcctcgaccgagaaaagcgctccaagtacaacatcact
ctcactgccacagatgagggcctgcctgccttatcaagcaggaaaactgtcgcgttagac
gtcactgatattaatgacaacgcaccaactttcagccaacgtgtttacagcacgcaggta
atggaaaacaattcgcctggcgtagctctgttacagatccacgccactgatccggatcag
ggtcagaatgcacggatatcatattttcttattgacggcgaagttaatggaaatccggta
tccacatatttctccattaatacggaaagcggagtcattcagtctttgcgttcacttgac
tttgaacaagtcaaagagtacaaaatacgagtccaagcgcaggacggagggtcgccacct
ctaaatagtaacacaactgttattgtacgtgtccaggaccagaacgacaaccctcctcag
gttctgtacccagtccagactggtggctctctggtggctgaactggtgcctcgttcagca
gatgtgggctatctggtcactaaagtggtggctgttgatgtggactctggacagaatgcc
tggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtgggcttacag
aatggagaaataagaactatccgccaagtcactgataaagatgctgtgaaacaaagactg
actgttatagtggaggacaacgggcagccctctcgttcagctacagtcattgttaacgtg
gcggtggcggacagcttccctgaagtgctgtctgagttcactgactttacacaagacaag
gagtacaatgacaacctgactttctacttagtgctggctttggctgtagtttccttcctc
ttcatcacgtgtttagtggttattatatcagtgaagatctacagatggagacagtctcgc
gtcatgtatcactccaatctccctgtgattccgtattatccaccacgttactcagacact
ttggggacagggactctccaacacgtgtacaactacgaggtgtgcaggacgactgactcc
agaaagagtgacataaagtatgtgcaacccatgagtcaaagtctggttagtgtggatgac
gctggaactgaaaccctgcagaatggagagcagccatcagcagtatctcaaatgtctact
ctggcacagatccggtattcaatcccagaggagatgaagaaagggtcccttgttggtaat
attgcacaagacctcggtttggatctgaaaaggctccgttctggccgggcccgcatcgtt
accggagaaaacatccagtacgtcgagctgaaggcagacaaagggactttggtcgtgcac
gagagaatagaccgagagcagctttgtggggagattgcggacgacgctgacgtcggagaa
aacggtctgcagaactacattttaagtccgaacgacaattttgttttgaaacaacatgtg
aatccggacggcagtaaatatgctgaaatggtgcttcagaaacccttagacagagaagaa
cagccgcgcctgtctctaaaactgttggctgtggacggcggaaatccacagagatctgaa
agcggagtattgcacgcagtgcgctcatttgattatgagcaaatcaaacagcttgtattc
acgatcaaagcgcaggatggaggctcccctccactcagtagcaatgtgactgtgaaagta
atgatccaggaccagaacgacaaccctcctcaggttctgtacccagtccagactggtggc
tctctggtggctgagatggtgcctcgttcagcagatgtgggctatctggtcactaaagtg
gtggctgttgatgtggactctggacagaatgcctggctctcctatagactgcagaaagcc
acagacagggcgctgtttgaagtgggcttacagaatggagaaataagaactatccgccaa
gtcactgataaagatgctgtgaaacaaagactgactgttatagtggaggacaacgggcag
ccctctcgttcagctacagtcattgttaacgtggcggtggcggacagcttccctgaagtg
ctgtctgagttcactgactttacacaagacaaggagtacaatgacaacctgactttctac
ttagtgttggctttggctgtagtttccttcctcttcatcacgtgtttagtggttattata
tcagtgaagatctacaggtggagacagtctcgcgtcatgtatcactccaatctccctgtg
attccgtattatccaccacgttactcagacactttggggacagggactctccaacacgtg
tacaactacgaggtgtgcaggacgactgactccagaaagagtgactgtaagttcggccaa
gccggtagtcagaacgtgctgataatggaccccagttctacaggaacgatgcagcggata
cagagtgaaaggagcatcctggatgaaccagactctcctctagagtccatcctccaactg
actgtacaatcgttttatggactgcgacgtcaaataggactgcttatgttgctgtttcat
gcggtcaacatggtaggtggtcagattcgttattctataccagaggagatgaagaaaggc
tctgttattggtaatgtagcgcaagatctgggtttagatctgaggaggctccgttctggg
cgggcccgtatcgtgaccggagaaagcatccactacaccgagctgaaatcagacaaaggg
attcttgtcgtgaatgagagaatagaccgagagcagctttgtggtgacgtaactccatgt
agcttcagctttgaggtgattttagaaaacccaatggaactgcacagaataactgttgag
gttttagacatcaatgatcacgctcccgtcttcccaaataaagataagcccatcggcttt
gaaataggcgaatcagcggcagttggagtgcagtttccactgcagagtgcagaggatcta
gatgtggggcaaaacgcgttgcaagattatgttttgtcgccaaacgaaaattttatattg
aagcaacatgcaaatccagatggaagtaaatatgttgaaatggtgctccagaagcctttg
gaccgagagcagcatccccatctgtctttaaaactgatcgcagttgacggaggaacacca
cagagatcgggtacagtaaatatagatgtgactgtgttagatgtaaatgacaatgctcca
gtatttaaccaatcggtgtataaagcatctgtgatggaaaacaccacgaaaggcactagt
attattacagtgaatgccacggacgctgacagtggttcaaatggagtcattacgtacagt
ttgtctaaaatgaaaggaagtgcagggaatgtattcagtattgatgaaaacacaggcaca
gtttctgtttcaggtcagatagattatgaaaaagacagaaaatacgaggtgagagtcgag
gcaaaggatcacggtggcctaaccggtacgagtaaaattacattcgatgtttttgatgtc
aacgacaatgccccagttattaacataatgtcattttctagccccgtatctgaagatgca
cgtcctggtacaactgttgctatattgaatataaaagatgcagattctgagaataatgga
caaataaaatgttctatagatggcaaacttccctttaagatcgaatcatctttaacaaac
tattacaatttgatctcagatcaatattttgacagagaatctgtctcagaatataatata
acaataacagccactgatatggggtctcccccactctctagctcaacaaagttacatctt
aaaatctctgacgtaaacgacaatgcacctttgtttgataaaaaaagctattctgcttac
atcacagagaataattcccctggaatttccatatttgctgtcagcgcgcgagactctgat
tggaatcaaaacgcaagaatttcgtatattttagaggacacacaagtcagtggtagtcca
gtttctacatatatttctttaaactctgaaactggagttcttagtgcggttcgttctttt
gattatgagcaaattaaacagcttcagctagtagtcaaagcgcaggatggaggctcccct
ccactcagtagcaatgtgacggtgaaagtaatgatccaggaccagaacgacaaccctcct
caggttctgtacccagtccagactggtggctctctggtggctgagatggtgcctcgttca
gcagatgtgggctatctggtcactaaagtggtggctgttgatgtggactctggacagaat
gcctggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtgggctta
cagaatggagaaataagaactatccgccaagtcactgataaagatgctgtgaaacaaaga
ctgactgttatagtggaggacaacgggcagccctctcgttcagctacagtcattgttaac
gtggcggtggcggacagcttccctgaagtgctgtctgagttcactgactttacacaagac
aaggagtacaatgacaacctgactttctacttagtgttggctttggctgtagtttccttc
ctcttcatcacgtgtttagtggttattatatcagtgaagatctacagatggagacagtct
cgcgtcatgtatcactccaatctccctgtgattccgtattatccaccacgttactcagac
actttggggacagggactctccaacacgtgtacaactacgaggtgtgcaggacgactgac
tccagaaagagtgactgtaagttcggcatagctgggagtcagaacgtgctgataatggac
cccagttctacagggacgatgcagcggatacagagtgaaaagagcatcctggatgaacta
gactctcctctagagtccatcctccaactgactgtacaatcgttttatggactgcgacgt
caaataggactgcttatgttgctgtttcatgcggtcaacatggtaggcggtcagattcgt
tattctataccagaggagatgaagaaaggctctgttattggtaatgtagcgcaagatctg
ggtttagatctgaggaggctccgttctgggcgggcccgtatcgtgaccggagaaagcatc
cactacaccgagctgaaatcagacaaagggattcttgtcgtgaatgagagaatagaccga
gagcagctttgtggtgacgtaactccatgtagcttcagctttgaggtgattttagaaaac
cctatcgaactgcacagaataactgttgaggttttagacatcaatgatcacgctcccgtc
ttcccaaataaagataagcccatcggctttgaaatcagcgaatcagctacaattggagtg
cagtttccactgcagagtgcagaggatctagatgtggggcaaaacgcgttgcaagattat
gttttgtcgccaaacgaaaattttatattgaagcaacatgcaaatccagatggaaggaaa
tatgttgaaatggtgctccagaagcctttggaccgagagcagcatccccatctgtcttta
aaactgatcgcagttgacggaggaacaccacagagatcgggtacagtaaatatagatgtg
actgtgttagatgccaacgacaatgtccccgtgtttaaccaatctgtgtataaagcatct
gtgatagaaaacacaacgaaaggcactagtattattacagtgaatgccacggacgctgac
agtggttcaaatggattaattacgtacagtttgtctaaaatgaaaggaagtgcagggaat
gtattcagtattgatgaaaacacaggcacagtttctgtttcaggtcagatagattatgaa
aaagacaaaaaatacgaggtgagagtcgaggcaaaggatcacggtggcctaaccggtacg
agtaaaattacattcgatgtttttgatgtcaacgacaatgccccagttattaacgtaatg
tcattttctagccccgtatctgaggattcacgtcctggtacaacaattgctgttttgaat
ataaaagatgcagattctgagaataatggacaaataaaatgttctatagatggcaaactt
ccctttaagatcgaatcatctttaacaaactattacaatttgatctcagatcaatatttt
gatagagaatctgtctcagaatataatataacaataacagccactgatatggggtctccc
ccactctctagctcaacaaagttacatcttaaaatctctgacgtaaacgacaatgcacct
ttgtttgataaaaaaagctattctgcttacatcacagagaataattcccctggaatttcc
atatttgctgtcagcgcacgagactctgattggaatcaaaatgccagaatctcgtatatt
ttagaggacacacaagtcaatggtagtccagtttctacatatgtgtctttaaactctgaa
actggagttcttagtgcagttcgttcttttgattatgagcaaattaaacagcttcagcta
gtagtcaaagcgcaggatggaggctcccctccattcagtagcaatgtgactgtgaaacta
atgatccaggaccagaacgacaaccctcctcaggttctgtacccagtccagactggtggc
tctctggtggctgagatggtgcctcgttcagcagatgtgggctatctggtcactaaagtg
gtggctgttgatgtggactctggacagaatgcctggctctcctatagactgcagaaagcc
acagacagggcgctgtttgaagtgggcttacagaatggagaaataagaactatccgccaa
gtcactgataaagatgctgtgaaacaaagactgactgttatagtggaggacaacgggcag
ccctctcgttcagctacagtcattgttaacgtggcggtggcggacagcttccctgaagtg
ctgtctgagttcactgactttacacaagacaaggagtacaatgacaacctgactttctac
ttagtgctggctttggctgtagtttccttcctcttcatcacgtgtttagtggttattata
tcagtgaagatctacagatggagacagtctcgcgtcatgtatcactccaatctccctgtg
attccgtattatccaccacgttactcagacactttggggacagggactctccaacacgtg
tacaactacgaggtgtgcaggacgactgactccagaaagagtgactgtaagttcggccaa
gccggtagtcagaacgtgctgataatggaccccagttctacagggacgatgcagcggata
cagagtgaaaggagcatcctggatgaactagactctcctctagaggtgagttaa

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