Anoplopoma fimbria (sablefish): 129090540
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Entry
129090540 CDS
T09102
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
afb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129090540 (gabra6a)
04082 Neuroactive ligand signaling
129090540 (gabra6a)
04519 Cadherin signaling
129090540 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129090540 (gabra6a)
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129090540 (gabra6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Beta-prop_CATSPERD
Motif
Other DBs
NCBI-GeneID:
129090540
NCBI-ProteinID:
XP_054454162
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Position
4
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AA seq
446 aa
AA seq
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MAILTLTFVTFICCISLGSVSGAGKIYSDNITLILDRLLDGYDNRLRPGSGGGVTEVKTD
IFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFEGPSEILRLNNRMVDKIWTPDTFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTITAECPMRLMDFPMDGHACPLRFGSYAYTS
SEIIFTWRKGPIASVDCPAESMSLLQYDLVEQILSSEIFKSNTGHYSVQVVHFHLQRKLG
YYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARESLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLQKQKARQDKLEVMATGSDDENASQMD
SSPQEGLKRRNHSVCRSEPGDALPLPIFLQQGSAFPQIPQLAGTSPIDKYARILFPLAFA
LFNLVYWYIYLAKDTMERARDVVLEN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccattctgacattaacttttgttacttttatctgctgtataagtcttggtagtgta
tctggagctgggaagatttactcggacaacatcaccctcattttggatcgacttttggat
ggttatgacaacagattgcgacctggatctggaggtggtgttacagaggtgaaaacagac
atctttgtcaccagctttggaccggtatcagatgttgagatggagtacaccatggacatg
ttcttccgtcagatgtgggttgacgagcggctaaaatttgaaggcccctctgaaatcttg
cggctgaacaaccgcatggtggacaagatctggacaccagacactttttttagaaactcc
aagaagtccatttcccataacatgaccacaccaaacaaactcttccgcatcatgcagaat
gggactgttctctacaccatgagactgacaatcactgcagaatgtccgatgaggctcatg
gacttccccatggacggccacgcctgtcctcttaggtttggaagttatgcctacacaagc
agtgaaatcattttcacttggaggaagggaccaatagcatctgtcgattgtcccgctgag
tccatgagtcttctgcagtatgacctggtggaacagattttgtctagtgagatattcaaa
tcaaacacaggtcactactctgtacaggtggtccatttccacctccagaggaagctgggc
tactacctcatacagacctacatccctctaataatggttgttgtgctctcccaagtctct
ttttggatcaacaaagagtctgttcctgcacgcacagttgctggcatcaccacagtgctg
accatgacaaccttgagcatcagcgcccgtgagtcacttcccaaagtagcctatgccacg
gccatggattggttcatcgctgtgtgttttgcctttgtggcatcggctcttgtggagttt
gcggcggtaaactacttcgccaccctccaggccaaccgtctacagaagcagaaagctaga
caagacaagcttgaggtgatggctaccggcagtgatgatgaaaacgcttcgcagatggac
agcagccctcaggaaggtttgaagaggagaaaccactcagtgtgccgcagtgagccagga
gatgctctgccgctgccgattttcctccagcagggctcagcttttcctcaaatcccgcag
ctggccggcaccagccccatcgacaagtatgcccgcatcctcttccccctggcctttgcc
ctcttcaacctagtctactggtacatctacttggccaaggacaccatggagagagccagg
gacgtggttcttgaaaactga
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