Anoplopoma fimbria (sablefish): 129090582
Help
Entry
129090582 CDS
T09102
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129090582 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129090582 (lrit3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
LRR_1
Ig_2
LRR_14
LRR_5
fn3
ig
C2-set_2
C2-set_3
LRR_9
FAM163
Motif
Other DBs
NCBI-GeneID:
129090582
NCBI-ProteinID:
XP_054454201
LinkDB
All DBs
Position
4:complement(21183007..21189062)
Genome browser
AA seq
638 aa
AA seq
DB search
MRRLLYVHVFVCCLTMAHPFCPSQCTCVFHGRTDGTGTRSVLCNDPDMSDIPVNVPVDTV
KLRIEKTMVRRIPTEAFYYLVDLRYLWITYNSISSVDTASFYNLKVLHELRLDGNMISIF
PWESLKEMPRLRTLDLHNNRIASIPNEAIPYLRNMNYLDLSSNKLATLPSDLMDIWPPFN
GAPISANVTQKVVLGLQDNLWYCDCKISKLIELSKMSGTQVVLMDLSLVCGGPENLAGVP
FQRAELDNCVKPSVMTSATKITSPLGSNVLLRCDATGFPTPTLYWAKSDGTQVNNTVQES
PGEGIRWSIMSLHGILHKDAGNYSCKAKNVAGNADATISISVAGAISTTILPPTPTIETE
PTSQSTTITPPTDIPTSPITTSTVLPRTSTLAAPKKPKTTTSTSLQKGSSKQAKPQPGGN
GRKLAADEKSKKSDASMSVKDLKIVEETTDTAVLLWTADGLPNDAPLTVVYSPYDEDDIK
RTLETNAGSGKVLLEGLSSGMRYSVCLVAKGSTAGKDPCIDFYTLDNVEDGGQSSLFIII
SGIACALVVSLIALLIYKILDLYCKGRDTASDEEELEKDSYVKFETISMKQRTLNSHPTE
LWARRATHESERMLLCSRSSIDSQMTYKSDSSRSEYLC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcggcttctctatgtgcatgtgttcgtctgctgcctcactatggctcatcccttc
tgtccgtcccagtgcacctgtgtcttccacggacgtaccgatggaacaggaaccagatca
gtgctctgcaatgatccagacatgtctgacatccctgtcaacgtccctgtggatacggtc
aaacttcgcattgagaaaaccatggtgcggcgaatccccacagaagctttttactacctg
gtggatctgcggtacctgtggattacttacaattccatcagctcagtggatactgcaagt
ttctacaacctcaaagtgctccacgagctgaggctggatgggaatatgatctccattttc
ccttgggagtctctcaaagagatgcccaggctgaggacactggatctacacaacaacaga
atcgctagtattcccaacgaggccataccctacctccgcaacatgaactacttggatctt
tccagcaacaaattagccaccctgccctctgacctcatggacatctggccccccttcaat
ggagcacctatctccgctaatgtcacccagaaagttgtgttaggcctccaagacaacctc
tggtactgtgactgcaaaatatccaagctgattgagctttccaaaatgtctggcacacaa
gtagttttgatggacctatctctagtatgcggtggaccagagaatctggctggtgtccct
tttcagcgtgctgaacttgacaattgtgtgaagccttcggtcatgacttcggcaacaaag
atcacatctcctttgggcagcaatgtccttctgcgatgtgacgccacagggtttccaaca
ccaactctttattgggcgaagtcagatggcacacaagtcaacaacacagtccaggagtca
cctggagagggcatcagatggtccatcatgagcttgcacggaatattgcacaaagacgcc
gggaactacagttgcaaagccaagaatgttgctggcaatgcagacgccaccatttctatc
tcggttgctggcgccatcagcaccaccatccttccaccgacgcctaccatcgaaaccgaa
ccgactagccaaagcacaacgataactccccccacggacattcccacctcgcccatcacc
acgtccacagttctaccaagaacgtcgacattggccgctcctaagaagccgaaaactacc
accagcaccagtttacagaaaggctcatcgaaacaagcaaaaccccagccaggaggtaat
gggagaaagctcgcagcagatgaaaagagcaagaaaagtgatgcatcaatgtctgtcaaa
gaccttaagattgtagaggaaaccactgacactgcagtgctgctctggacagcagatggg
ttaccaaatgatgccccactaacggtggtatactcaccctatgatgaggatgacatcaaa
aggacactggagactaatgcgggcagtggaaaagtgcttctcgagggactgtcctctggg
atgaggtactcggtttgcctcgtagcaaaaggtagtactgctggaaaagatccttgcatt
gacttctacacattggacaatgtagaggatggtgggcagagctcgcttttcattatcata
agcggcattgcttgtgctttggttgtgtcccttattgcactgttgatctacaagattctc
gatctgtactgtaagggacgtgacacggcttcagatgaagaggagcttgaaaaagacagc
tatgtcaagtttgagacaatttcaatgaaacaaaggaccttgaactctcatccaactgag
ctttgggcaaggagagcaactcatgaatcagagcgaatgctgctgtgctctcggtcaagc
atcgactctcagatgacctataagagtgacagttcccgctctgagtatctctgctga
DBGET
integrated database retrieval system
