KEGG   Anoplopoma fimbria (sablefish): 129090904
Entry
129090904         CDS       T09102                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1-like
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04010  MAPK signaling pathway
afb04145  Phagosome
afb04148  Efferocytosis
afb04310  Wnt signaling pathway
afb04370  VEGF signaling pathway
afb04510  Focal adhesion
afb04520  Adherens junction
afb04530  Tight junction
afb04620  Toll-like receptor signaling pathway
afb04810  Regulation of actin cytoskeleton
afb05100  Bacterial invasion of epithelial cells
afb05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129090904
   04310 Wnt signaling pathway
    129090904
   04370 VEGF signaling pathway
    129090904
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129090904
   04148 Efferocytosis
    129090904
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129090904
   04520 Adherens junction
    129090904
   04530 Tight junction
    129090904
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    129090904
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    129090904
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129090904
   05100 Bacterial invasion of epithelial cells
    129090904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129090904
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129090904
   04031 GTP-binding proteins [BR:afb04031]
    129090904
Membrane trafficking [BR:afb04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    129090904
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    129090904
  Macropinocytosis
   Ras GTPases
    129090904
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    129090904
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129090904
  Exosomal proteins of other body fluids (saliva and urine)
   129090904
  Exosomal proteins of colorectal cancer cells
   129090904
  Exosomal proteins of bladder cancer cells
   129090904
GTP-binding proteins [BR:afb04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    129090904
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 129090904
NCBI-ProteinID: XP_054454266
LinkDB
Position
5:5231586..5237870
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLSPITYPQGLAMAKEISSVKYLECSALTQRGLKTVFDEAIRAVLCPP
PTKDKRRRCKIF
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccataaagtgtgtggtggtgggggacggggctgtgggtaaaacatgcctgctt
atcagctacaccaccaatgccttccctggagagtacatccccacagtctttgacaactac
tctgccaatgtgatggttgatgggaaaccagtaaacctgggcctgtgggatacagcggga
caggaagactacgacaggctcaggcctctgtcctaccctcagacagatgtgttcctgatt
tgcttttcacttgtcagtccagcctcttttgaaaacgtccgtgccaagtggtaccctgag
gtgagacaccactgccccaacacgcccatcatcctggtgggcaccaagctggacctgaga
gacgacaaggacaccattgaaaaactcaaggagaagaaactatcccccatcacctaccct
cagggcttggccatggctaaagaaataagttcagtaaagtatctggagtgctccgctttg
acgcagcgcggccttaagacggtgtttgacgaagccatcagggccgtcctgtgcccccca
cccaccaaggacaaacggaggaggtgcaaaatattttaa

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