KEGG   Anoplopoma fimbria (sablefish): 129090907
Entry
129090907         CDS       T09102                                 
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129090907
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129090907
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 129090907
NCBI-ProteinID: XP_054454267
LinkDB
Position
5:complement(7767421..7779043)
AA seq 1061 aa
MLKQQQQPGSGGRKAANGTSGPAGMSPPVSGINSGSRTPAGRNRTSAKPSFQSSPVFEGV
YNNARMLHFLTAVVGSTCDIRVKNGSVFEGIFKTLSSRCELAVDAVHKRAEEAGSTSLLP
RREDITDTVIFSPTDLVTMICKDVDLNFATKDTFTDTAISSTRVNGEHKEKVLQRWEGGD
SNGESYDLENDASNGWDANEMFRYNEVKYGVTSTYDSSLSMYTVPLEKGTSDTFRQREAR
AARLASEIESSPQYRHRVGLENDEGKSEEDKYSAVVRDGNDRERGRESPRDRERERGRDS
PGANTREGKYIPLPQRQREMNRERERAERGPGGPPPHNRLSGGYRSNPPSSSSPRPPLPS
AAGPQSGVSPSERNSPLSGRGGAYAPHHPQGSPSPGPNSGPASAYTPASTGGPATMPASA
SAAQSPASPPAPHGHTVPHSHSLPHSLSDAVRPVNGVSTRTSPKAQRPPQSSRTVRTSNS
HAQSTTTRSPRSGSSQDTPYLDTSSVSMPPQKTSGPAPLFPVDVNEILGAAAKERAAENP
SSTEDSKNSKAPSVQQRSQIEELRKFGKEFRLQPSGGSSSSPSSPATANPPAVGEVAQPS
AAQPSPSDAHPASESKAQAPAPGTSQHQPQPSPAPAVDATKDTTTTPGTSTGASTAPVSD
RHSPATPQPARTPGSEEARSESTERTEGVADQVKKSTLNPNAKEFNPIKPLMPMTKPNPA
PTPPRPTPPSPVVLQHPGGQGPLYNTPYLSYVSQIHSVQPPPMYQYTMSTVSQGKYPRTK
GSVVAQRSDHGSSAPPMMQAAASAAGAPLVASPYPQSYLQYNPQQYSQQQVIQAMSPYPG
QPMYSMLQGGARMIGQGGGPHPQALGPGGPQFSAQGDGPQGPQQGIYAPQSFSHHSGAVH
QPQPSSTPTGNQPPPQHAAPSPGQNAQSGPQPQSLYHSGPLSAPTPPNMPPGHTSPQGSY
PIQGYSIHSHQGIPQTYPLGQLAQAHVQGAMSGPHHSGNHGQPQLVMLQPPPQQGPGSVP
QHPQHGPQQGAHQHFYIGHPQGMSPNIPAACWMLAQTERDS
NT seq 3186 nt   +upstreamnt  +downstreamnt
atgctgaaacagcagcagcaacccggctcaggcggcaggaaagcggccaacgggacctca
ggccccgccggtatgtctcccccagtcagcggcatcaacagcggcagcaggacaccggcc
gggaggaatcggacttctgcaaagccatcattccagtcatctcctgtgtttgagggtgtg
tacaacaatgccagaatgcttcacttcctcacagctgttgtcggctccacctgtgacata
agagtgaagaatggcagtgtatttgaaggcatattcaagactctcagttctcggtgtgag
ttggctgtggacgctgtacacaaacgcgctgaagaggcaggctcaacatcacttctgcca
cggagggaagacatcactgacactgtgatcttcagccccacagaccttgtgactatgatc
tgcaaagatgttgacctcaactttgccaccaaagacaccttcacggatacagccatcagc
tccactcgtgtcaatggagaacacaaggagaaggttttgcagagatgggagggaggagac
agcaatggagagagttacgatctggaaaatgatgcatccaatggctgggacgccaatgag
atgttccgttacaatgaagtgaaatatggagtcacgtcaacatatgattcaagcctttcc
atgtatactgtgcccctggagaaaggcacctctgacacgtttcgtcaaagggaggcacgt
gctgctcgccttgccagtgagattgagtccagcccccagtatcgccatcgcgtgggcctg
gaaaatgatgagggcaaaagtgaagaggacaaatacagtgctgtggtgcgggatggcaat
gatcgtgagaggggccgtgaaagcccccgtgacagagagcgcgaaaggggccgagacagc
cccggagccaacaccagggagggcaagtacattccattacctcaacgacagagagagatg
aaccgggagcgggagcgagctgagaggggtcctggaggacctccgccccacaaccgtcta
agtggaggttatcgctcaaaccctccatcctcctcctcccccagacccccactgccctct
gctgctggtccccagtctggcgtctccccctcggagagaaacagccctctctcaggccga
ggtggtgcctacgctccccaccacccccagggaagcccgagtccaggccccaactcaggc
cctgcgagcgcgtacacacctgcctctacaggaggaccagcaaccatgccagcctctgct
tccgctgctcaatctccagccagcccccccgcccctcacggacatacagtccctcattcc
cactcactcccacactcgctgtctgacgctgttagacctgttaatggagtctctaccaga
acatctcctaaagcccaaagacctccacagtcgagcagaacagtccgtacttctaactca
catgctcagtccacaactactcgttctcctagatcaggttcttcccaggacacgccttat
ttggacacatcgtctgtctccatgcctcctcaaaagacgtctggccccgcccctctcttc
cctgttgatgtgaatgagattcttggtgcagctgcaaaggaacgagccgccgagaacccc
agcagcacagaggacagcaaaaatagtaaagctccctctgttcagcaaaggtcacagatt
gaggagctgcgtaaatttggcaaggaattcaggctccagccgagtggaggcagctctagc
tcgcccagctccccagcaaccgcaaatcctcctgccgtcggtgaggtcgcccaacccagt
gcagcccaaccctcgccatcagacgcccaccctgcttcagagtccaaagctcaggctcca
gctcccggtacttcccagcaccaacctcagccgtcaccagcccctgctgtggacgctacc
aaggacaccacaactacacctggtacctcaacaggagctagcacagcacccgtttcagac
cggcattcaccagccaccccgcagccagccaggaccccaggtagtgaggaggccaggtct
gagtcaacggagcggacagagggcgtggcagaccaagtgaagaaatcaaccttaaacccc
aacgctaaagaattcaaccctattaaacctctaatgcctatgacgaagcccaaccctgcg
cccaccccacctcggccaactcctccaagcccagtggtccttcagcacccaggcggacag
ggaccactttacaacaccccctacctctcctatgtttcacagatccactctgtgcagccc
ccaccgatgtaccagtacactatgtctacagtcagccaggggaaataccccaggaccaaa
ggctcagtagtggcacagcgttctgaccatggttcctcagcaccacctatgatgcaagct
gcagcgtcagcagctggggccccgctggtagcgtccccctaccctcagtcctaccttcag
tacaacccacagcagtacagccagcagcaggtcatccaggccatgtccccctaccctgga
cagccgatgtactccatgctgcaaggcggagctaggatgatcggtcagggagggggtccc
cacccacaagccttgggaccaggaggcccccagttctctgcacagggagacggacctcag
ggaccacagcagggcatctacgctccacagtctttctcccaccactcgggtgcagttcat
cagccccagccttccagtacccctacaggcaaccagccccctccccagcacgccgcacct
agccctggacagaatgcccagtcaggcccacagccccagtccttgtaccactcaggtccc
ctgtcagcccccaccccacccaacatgccgccgggccacacgtctccacaaggctcctac
cctattcagggctatagcatccacagccaccagggtatcccacaaacatatccgcttgga
cagttagcacaggcccatgtacagggagccatgtcgggtccccaccactcggggaaccac
ggtcagccccagttagtgatgttgcagccgcctcctcagcagggccccggctcagtgccc
cagcacccccaacatggaccacagcaaggagcacaccaacacttttacataggacatcca
caaggaatgagccccaacatccccgctgcctgctggatgttggcccagactgaacgcgac
tcgtga

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