Anoplopoma fimbria (sablefish): 129090951
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Entry
129090951 CDS
T09102
Symbol
sec24c
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129090951 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129090951 (sec24c)
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129090951 (sec24c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
129090951
NCBI-ProteinID:
XP_054454322
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Position
5
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AA seq
1255 aa
AA seq
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MNVNQHTPMASPYGQPQPGYGQPGYAPLDGGYAAPYAPYNGPASAYQPGAPPQGYSPFTS
FPSKAVAANPVSDLSSPLDLGPARGPPXSGAPSVSAPQPYNQYSHSQGDMQNGPPPMTQA
PPRPAVSQPYNQGAVNLSGPQPSYPQHYAPQPSMQQVTNQMTGMQIASGPPTAAGPGYAP
PHSSQPPVNTAYSAAPPHSYTQAPPPASSAPTQPPPPSGPAASQQYYGGPPPPSQQPFNS
SLPPTSQQQFASPAPPPPSQQTFPPSSYSGPAPPPSQGPAPPVSSPQQSFPPTQPPFSTA
PPPVSHPAFVSGPPPPAQGSFQPRAPPPSSQPGSFPPPGPPPTSMTTGQYPGPMPPQQQP
PPSQPSPYHSGPSPPRSQMPPTSMAQSNHLPPGPQGPPGPPGSMQQPPPQPGMQGGYPPQ
QNGAFGQVRGPQPGYPGPYPGQPNYGAPAPAQAPAPAAQKRLDPDAIPSPQASDMPAVQK
SRHRIDPDAIPSPIQVIEDDKAKSTEPFTTGVRGQAPPLVTTNFQVKDQGNASPRFVRCT
AYNVPCTADMAKQSQVPMAAVIKPLATLPPDETPPYLVDHGEGGPIRCNRCKAYMCPYMQ
FIEXGRRFQCGFCSCLTEVPPHYFQHLDHTGKRVDCYDRPELSLGSYEFMATVDYCKNNK
IPQPPAFIFLIDVSYNAVKSGMVNIVCQELKTLLDYLPRENPEMDSVVRVGFVTYNKVLH
FYNVKSSLAQPQMLVVSDVSDMFVPLLDGFLVNVNESRLVIESLLDQIPEMFADTRETET
VFGPVIQAGLEALKAADCSGKLFVFHTSLPIAEAPGKLKNREDKKLIGTDKEKSLFQPQV
GFYNTLAKECVAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTYFQAQSDRERFLN
DLRRDVQKLVGFDAVMRVRTSTGIRATDFFGSFFMSNTTDVELAGLDCDKAVTVEFKHDD
KLSEETGALMQCAVLYTSCSGERRLRVHNMAVNCCSQLADLYRNCETDTIINFFSKYAFR
GLLNSPTKAVRDTLINQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCLLKSDVL
MPGADVSLDDRAYLRQLISGMDVSESHVFFYPRLLPLTKLESSSLPVALRDSEERLSKGG
VYLLETGLHLFLWVGASVQQELLLNIFGTASFSQIDPSLTNLPVLDNPFSQRLREIIDSF
RAQRSRYMKLMVVKQEDKSELIFRHFLVEDKSASGGASYVDFLCHMHKEIRQLLS
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccgatggcctctccatacggccagccccagcctggctac
ggccaacccggctacgcacccctggacggcggatacgcggcaccgtacgctccctacaac
ggccctgcctccgcctaccagcccggggctccaccacaaggttactctcctttcacaagc
tttccctctaaggctgtggctgccaacccagtctctgacctctcctctcctctcgactta
ggtccggccaggggtcccccancctctggagccccttcagtctcagctcctcaaccatat
aatcagtacagtcacagtcaaggggacatgcagaatggacccccgcctatgacacaggca
ccacccaggcctgctgtgtctcagccatacaaccagggagccgtgaacctgtcagggcca
caaccctcctatccccaacactacgcaccccaaccctcaatgcagcaggtcactaaccag
atgaccgggatgcagatcgcctctggaccgccaaccgctgcgggaccaggatatgctcca
cctcacagctcccagcctcccgtcaacaccgcctactcagctgctcctccacactcttac
acccaagctcctcccccggcttcctctgccccgacccaaccgccacctcccagtggccct
gcagcttctcagcaatactatggaggcccaccacctccttcccaacagccattcaactcc
tccctcccccctacctcccaacagcagttcgcctctcctgcaccgccacctccttctcag
caaacctttcctccctcctcctactcgggtcctgcgcctcctcccagccagggtcctgct
cccccagtgtcctcaccacagcagtccttccctccaacccagccccccttctccacagca
cctccacctgtcagccaccctgccttcgtctccggcccgcctccccccgcacagggctcc
ttccagcctagagcaccccctccttcctctcagcctgggtcttttcctcctcctggtcct
cctccaacatcaatgacaactggccagtacccaggccccatgcctccccaacagcagccc
cctccatcccagccatccccctaccactcaggtccctctcctcccagatctcagatgcct
cctacttccatggcccagagcaaccacctccctccaggaccacagggccccccaggccct
cctgggtccatgcagcagcctccacctcagcctggcatgcagggaggataccctcctcag
cagaatggtgcgttcgggcaggtgagaggccctcagcctggttatccaggcccgtatccc
gggcaaccaaactacggagcccctgcaccagcacaggctcctgctcccgctgcacagaaa
agacttgacccggatgccattcctagcccgcaagcgtctgacatgccggctgtgcagaaa
tcaagacatagaatagacccagacgctatccccagcccaatccaggtaatagaggatgac
aaggccaagagcaccgagccgttcaccacaggggtcagaggtcaggccccaccgctggtc
accaccaacttccaggtcaaagaccaagggaatgccagtcccaggttcgttcgctgtaca
gcttacaacgtgccgtgcaccgccgacatggccaagcagtctcaggtgcccatggccgcc
gtcatcaagcccctcgccacgctgccgccagacgagacgcctccatacctggtggaccac
ggcgagggcggtccaatccgctgcaaccgttgcaaggcttacatgtgtccatacatgcag
ttcatagagnnggggcgccgcttccagtgtggcttttgcagctgcctcacagaggtgcct
ccacattacttccagcatctggaccacactggtaagagggtggactgctatgacaggcct
gagctctcgctgggcagctacgagttcatggccactgttgactattgtaagaacaacaag
attcctcagccgccagccttcatcttccttatcgacgtgtcctacaacgctgtgaagagc
ggcatggtcaacattgtctgccaggaactcaagaccctcctagactacctgcccagggag
aacccagagatggactctgtggtgcgggtgggctttgtcacctacaacaaggttttgcac
ttctacaacgtcaagtccagcctggcccagccccagatgttggtggtgtcggatgtatcg
gacatgtttgttcctctgctcgacggcttcctggtcaacgtaaacgagagccggctagtt
atcgagagtctgctggaccagatcccagagatgtttgcagacaccagagaaactgagacg
gtctttggacccgtcatccaggcaggactggaggcactaaaggctgcagactgctcaggg
aagctgtttgtgtttcacacctctctgcccatcgcagaggctcctggaaaactaaagaac
agagaagacaagaagctgatcgggacggataaggagaagtctctgtttcagccccaggtg
ggtttctacaacactctggctaaggagtgtgtagcgcagggctgctgtgtggatctcttc
ctcttccccaaccagtatgtggacgtcgccacgttaggggtggttcccgtctccactgga
ggctctgtctacaaatacacctacttccaggctcagtcggacagagagcgattcttgaac
gacctcagacgggacgttcagaagctagtcggctttgatgccgtcatgagggtgcggacc
agcacaggtatccgggcgacagacttcttcggctccttcttcatgagtaacaccaccgat
gtggagctggcgggcctggactgtgacaaggccgtcactgtcgagttcaaacacgatgac
aagctcagcgaggagacgggggcactcatgcagtgcgccgtgctgtacaccagctgcagc
ggcgaacggcgtctccgcgtccacaacatggcggtgaactgctgctcccagctggctgac
ctctaccgcaattgtgagaccgacacaatcatcaacttcttctccaaatacgccttccga
ggcctcctgaacagcccgactaaggcggtgagagacactctgatcaaccagtgtgctcag
attctggcctgctaccgaaagaactgtgcaagcccctcatcagctggtcagctgatcctc
ccggagtgcatgaagctgctgccggtctatctgaactgtttgctgaagagtgacgtgctg
atgccgggagccgacgtgtcgttggacgaccgtgcgtacctgaggcagctgatcagcggc
atggacgtctccgagagccacgtcttcttctacccccgcctgctgccgctgacaaagttg
gagagcagctcgttgccggtggcgctgagggactcggaggagaggctgtctaaaggcgga
gtttacctcctggagacggggctccacctcttcctgtgggtgggggccagcgttcagcag
gagctgctgctcaacatcttcggcacggcgagcttcagccagatagacccgagcttgaca
aatctgccggtgctggacaacccgttctcccagagactccgagagatcatcgactcgttc
agagcacagagatcacgatacatgaagctgatggtggtgaaacaggaagacaaatccgag
ctgatattcaggcacttcctggtcgaggacaagagcgccagcggaggagcgtcatacgtg
gacttcttgtgtcacatgcacaaggagatccgccagcttctcagctag
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