Anoplopoma fimbria (sablefish): 129090954
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Entry
129090954 CDS
T09102
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
afb04054
]
129090954
Pattern recognition receptors [BR:
afb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129090954
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
LRR_6
SPRY
NOD2_WH
LRR_4
Motif
Other DBs
NCBI-GeneID:
129090954
NCBI-ProteinID:
XP_054454324
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All DBs
Position
5:18214676..18220264
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AA seq
1035 aa
AA seq
DB search
MEQIIVADKTDDVPRELVPSIQSALHHYQPSYTAKSGGNVVAPYIIGSSIQTLNISISTS
QGSIVSSKEALNHDPADSCGALQPQNDKVAQCQEQLKTTLKRKFSHLLEGMTTEATRISL
NKIYTELYITEGGSGEVNKEHEVRQIETVSKIHVDQEKSIHCNHLFDPPPGRDRQIRTVI
TRGVAGIGKTVSTNKFTLDWAEGEANTNLAFVFPLSFRELNLMRKKTFSLVELLSVLFPE
TKDTGIFTYGSYKMLFILDGLDESRLLLDFHKSEIVSDVTQTAMIAELLINLIRGRLLPL
ALVWITSRPVASSQIPLEYVDLVTEVRGFNNPQKDEYFRRKISDQSLADRVIKHVKSCRS
LHIMCHIPVFCWMAASVLEKKADSKDTPKTLTQMYIHFLSLYVEGMKKRLPGRRESSADC
LRENLISLGKLAFKELERGHLIFYESDLAMNGIKVKQASMFSGVYTQIFNEELTLCKEKM
FCFVHLSVQEFFAALYVFLTFHNEDNNVLVKKSSASRRFLFRSSSELILYKAAVEKALGC
QNGHYDIFLRFLLGLSLESNQTLLKHLMTSNRSNQRTRTEIIKHIKGRIRESPSPDRCLN
LFHCLNELNDHSLVTEIQSFLHSGNLNETKLSPAQWATLVFVLLTSEKELSVFDLSDYTR
SEEGLLRLLPVVKTARVVNLRACNLTGSCCENLVNNINPSQVRELDLGNNNLTDEGIQML
SNGLKNSRLETLRLRSCNLTEHSSEALASVISSASCQLKELDLSDNDFQDVGVKNLCGGL
GSPHCKLEILIVSLCRVTEEGCTFLASALNSSCLRELDLSYNHPGESGLQLLSALEDDPQ
CSLQKVSVDQCDESRVQPAPKKYKKTLTLDPNTAHRDLSLSEGNRKAVRWTKQPYPDHPE
RFDFWNQVLCKEGLTGRCYWEAEWSGRASIGVAYKRMCRKGEGHDSWLGKNDCSWGLNCT
KDGYRTWHNTTDTAITIPTSSNKVGVYLDWSAGELSFFRVSCGDLTLLHTFKTTFTEPVY
PGFRLGWVDSMVYLC
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggagcagataattgttgctgataaaacggacgacgttcctcgagagttagttccctct
attcagtccgcgcttcatcattaccaaccgagctacaccgctaagagtggaggcaatgtg
gtcgctccctacatcattggttccagcattcagaccttaaacatcagtatctcaacgagc
caagggtctatcgtttcatcaaaagaagcattgaaccatgaccctgcagacagctgtggt
gccctgcagccccaaaacgataaggttgcacaatgtcaagagcaactaaagactactctg
aagaggaagttcagccacttgctggaggggatgacgacggaggcaaccaggatctctctc
aataagatctacacagagctctacatcaccgagggaggaagcggagaggtcaacaaggag
catgaggtgaggcagattgagacggtgtccaagatacacgtggaccaggagaaatccatc
cactgcaatcacctcttcgatcctccacctggacgagaccggcaaataagaactgtgatc
acgaggggggtcgctggcatcggaaaaacggtctctaccaataaattcactctggactgg
gctgagggcgaagcgaacaccaacctggcgtttgtctttcctctctcttttcgtgagctg
aatctgatgagaaagaaaaccttcagtctggtggagcttctcagtgtccttttccccgaa
acaaaagacacaggaatcttcacttatgggagttataaaatgctcttcatcctggacggg
ctggacgagagccgcctgttattggacttccacaaaagtgaaattgtttctgatgtgacg
cagaccgccatgatcgcggagcttctgatcaacctcatcagaggaaggctgcttcctttg
gctctcgtttggataacatctcgcccggtggcttccagtcagatccctctggagtacgtt
gatctggtgacagaggtgcgagggttcaacaacccccagaaagacgagtacttcaggagg
aaaatcagcgaccagagcttagcagacagggtgatcaagcacgtgaaatcctgcaggagt
cttcacatcatgtgccacataccagtcttctgctggatggcggcgagcgttcttgagaag
aaggccgacagtaaagacacgccaaagaccctcactcaaatgtacatacacttcctgtcc
ttgtacgtggagggcatgaagaagaggcttcccgggagaagagagtcaagcgctgactgc
ctgagagaaaacctcatctcgctgggtaaactggccttcaaggagctggagaggggccac
ctgatcttctacgagagcgacctcgccatgaacggtatcaaagtcaagcaggcgtccatg
ttctcaggagtctacacacagatcttcaatgaggagctgacgctgtgcaaagagaagatg
ttctgctttgtgcacctgagcgtccaggaattctttgccgcgctctacgtcttcctcacg
ttccacaatgaagacaacaacgtcctggtcaagaagtcatccgcttcccgacgcttcctg
ttcaggagttcatcagagctcatcctctacaaagcagcggtggagaaggctttggggtgc
caaaatggacattatgacatctttctgcgcttccttttgggcctgtctctggaatctaat
cagactctgttgaagcatcttatgaccagcaacagatcgaaccaaagaacaagaacggag
atcattaaacacataaaggggagaatccgggagagtccgtccccagacagatgcctcaat
ctctttcactgtctcaatgagctgaacgaccactctctcgtgacggagattcagagcttc
ctccactcgggcaatctcaacgaaaccaaactttcacctgcccagtgggccacgctggtc
tttgtattactgacatccgagaaggagctgagtgtgtttgacctgagcgactacaccagg
tctgaggagggtcttctgaggctgctgcctgtcgtaaaaacagccagagtggtaaatctg
cgggcgtgtaatctcactgggagttgctgtgaaaacctggtgaacaacatcaacccatca
caagttagagagctggacctgggcaacaacaacctgaccgatgaaggaatacaaatgctc
tctaatggactgaagaacagcagactggagacactcagactgaggagctgcaacctgacg
gagcacagctccgaggccctggcctccgtcatcagctcagcctcctgccagctcaaagaa
ctggacctctctgacaacgactttcaggacgtaggagtcaaaaacctctgtggtggactc
gggagtccccactgtaaactggaaattctcatcgtgtcgctgtgcagagtgacggaggaa
ggctgcactttcctggcatcggcgttgaactcatcctgtctgagagagctcgacctgagc
tacaaccacccaggagagtcgggtctgcagctgctgtccgccctggaggacgacccacaa
tgcagcctgcagaaagtcagtgtggatcagtgtgatgaatccagggttcagccagctcca
aagaaatacaaaaagacgctcaccctggaccccaacacagcacacagagacctctctctg
tccgagggaaacaggaaagcggtgcgttggaccaagcagccgtatcctgatcacccagaa
cggttcgatttctggaaccaggtgttgtgcaaggaggggctgactgggcgctgctactgg
gaggctgagtggagtgggagagcttccataggagtggcctacaagaggatgtgcaggaag
ggagagggtcacgacagctggttaggcaagaatgactgttcctggggactgaactgcacc
aaagatggctacaggacctggcacaataccacggacacggccataaccatcccaaccagc
tccaacaaagtaggagtctatctggactggtcagccggggagctgtccttcttcagggtc
tcctgtggggacctgaccctcctccacaccttcaaaaccaccttcactgagcccgtctac
ccggggtttcgactcggctgggtggactccatggtctacttgtgctag
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