Anoplopoma fimbria (sablefish): 129090996
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Entry
129090996 CDS
T09102
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129090996 (top2a)
03036 Chromosome and associated proteins [BR:
afb03036
]
129090996 (top2a)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
129090996 (top2a)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Topoisomerases
129090996 (top2a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
129090996 (top2a)
Centrosome formation proteins
Centriole proteins
129090996 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
129090996
NCBI-ProteinID:
XP_054454373
LinkDB
All DBs
Position
5:complement(5971410..5984382)
Genome browser
AA seq
1587 aa
AA seq
DB search
MAEPLKQAFFENKPLEKTKKDPKRLSVERIYQKKTQLEHILLRPDSYVGSVEPVTQQMWV
YDEDDGLNCRDVTFVPGLYKIFDEILVNASDNKQRDKSMSIIKINIDVENNTISVWNNGK
GIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETAC
KESKKNFKQTWYDNMGRTGDSQIKPFEGEEYTCITFRPDLAKFKMSILDKDTVALMTRRA
YDIAGVSKGVRVFFNGKRLPLVGFRSYVDMYVKDKVDELGSALTIVHEIANERWEVCLTM
SEKGFQQVSFVNSIATTKGGRHVDYVADQVVSKLIEVVKKKNKAGVAIKPFQVKNHLWLF
VNCLVENPTFDSQTKENMTLQQKSFGSTCPLSDKFIKQATSGGIVESIMNWVNFKAQTQL
NKKCSSVKHTKIKGVPKLDDANEAGGKNSIGCTLILTEGDSAKTLAVSGLGVVGRDRYGV
FPLRGKMLNVREATLKQIMENAEINSIIKIIGLQYKKNYSDPESLKSLRYGKIMIMTDQD
QDGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKASHKKTQLSFYSIPEYNAWKDSQP
NHKSWRTKYYKGLGTSTSQEAKEYFSDMQKHRIPFKYSGPEDDEAITLAFSKKKVEERKV
WLTNFMLNRRQRRAHNLPEEYLYSQSTKSLSYNDFVNKELVLFSNSDNERSIPSLVDGLK
PGQRKVLFSCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNL
LQPLGQFGTRLHGGKDSASPRYIFTMLSPLARLVFPTVDDNLLKYNIDDNQRVEPEWYMP
IIPTVLVNGAEGIGTGWASRIPNYDIREIVSNIHRMLNGDEPLPMLPNYKGFKGTLDQVL
DNQFINSGEVAIIDSTTIEISELPVKSWTQYYKENVLEPMMTGTEKVPPLITDYKEYHTD
TTVRFVVKMTTEKLSEAEAAGLHKVFKLQNTITCNSMVLFDHVGSLKKYESVQDILKDFF
ELRMNYYVLRKDWLVGMLGAESARLTNQARFILEKIEGSLVIENKPKKELIRMLQQMGYD
SDPVKAWKQAQEKNVDVVEEEVEEGAEEGAEEEDTSGPDYNYLLSMPMWYLSKEKKDELC
KQRDAKMTELDILKKKAPTDLWKEDLAAFSEELERIEAKEKKDAEMPVVKKGAGKGKAMK
VKLETLPTPQGRRVVPRITSTMKAEANRKACLRRGEGKKGRKVKSEDCVVKMEFGDDAEN
EVPSEEIGLAARLGKKPRTQAKETEASKTSRQSTLQFKAVTKKPKKNPWSDEDSDANLSE
SEMEAEEVVAPREKVERKTKAAVKYSMSDSENEFDDWGKKDAPKQRAVTSDDDDDSFIPQ
PMADSDVDSPAPPPKAPEPTKKTSKTTVKQAKAKSSSQSDDQLPAPKAPAQRKTKEAAPK
KAAAPKKAAAPRKPAASKKKAADVKQPSILDALSKPKPASTTAAKVSSFDSSDSESEAKA
PVTKAKPVLKRKKAISDESDSSSGDLMSRLKAKTTASKKTKNWEEDDSFQVSDQDAATPV
AVAARNKPSRARKPMTYKIDSDSDEDF
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccactgaagcaggccttctttgaaaacaagccgttggaaaagacgaagaaa
gatccgaagcggctgtcagtggagaggatctatcagaagaagacgcagttggagcacatt
ttgctccgaccggactcctacgttggctctgtagagcctgtcacccaacaaatgtgggtg
tatgatgaggatgatggactgaactgccgtgatgtgacgtttgtgcctgggctttacaag
atttttgatgagatccttgtaaatgcatctgacaataagcagagggacaagagcatgtcc
atcatcaaaatcaacatagatgttgagaacaacaccattagtgtgtggaataacgggaag
ggtatccctgtggtggagcacaaagtggagaaggtctatgtgcctgctctcatctttgga
cagctcctcacctccagtaactatgatgatgacgagaagaaagtcactggtggacgcaat
ggatatggtgctaagctttgcaacatctttagcacaaagttcactgtagagactgcctgt
aaagagtccaagaaaaacttcaagcagacttggtatgacaacatgggcagaacaggggat
tcccaaatcaaaccctttgaaggagaggaatacacttgcatcaccttcaggccagaccta
gccaagtttaaaatgagcatcctggacaaagacacagtggctctgatgaccaggagggcc
tatgacattgctggagtctccaaaggtgtccgtgtgttcttcaatggcaagaggctgcca
cttgtaggcttccgtagctacgtggacatgtatgtgaaggacaaggtggacgagctcggc
agtgccctcaccatagtccacgagattgccaacgagcgctgggaggtctgcctcaccatg
agtgagaaaggtttccagcaagtcagctttgtcaacagtattgctacaaccaagggaggg
agacacgttgactatgttgctgaccaggtggttagcaagctcattgaagtggtgaagaag
aagaacaaagctggggtggccatcaagcctttccaggtgaagaaccacctgtggctgttt
gtcaattgcctggttgagaaccccacctttgactctcagaccaaagagaacatgacgctg
cagcagaagagctttgggtccacttgtcctctcagtgacaagttcatcaaacaggccaca
tctggtggaattgtagaaagtatcatgaactgggtgaacttcaaggctcagacccagcta
aacaagaaatgctcgagtgtaaagcacacaaaaatcaaaggggttcctaaactggacgat
gccaacgaagcaggtgggaagaactccatcggctgcacgctgatccttactgagggagac
tcggccaagacactcgctgtgtctgggctgggagtggtcggcagggaccgctatggcgtc
ttccctctcagaggaaaaatgctcaacgtccgggaggccacactcaaacagatcatggag
aatgctgaaatcaacagcatcattaagatcattggccttcagtacaagaagaactacagc
gacccagaatccctcaagagtctgcgttatggcaagatcatgatcatgacagatcaggat
caagatggctcccacattaagggccttctaatcaacttcatccaccataactggccatca
ctgctgcgccacaacttcctagaagagttcatcacccccatcatcaaggcatctcataag
aaaactcagctgtctttctacagtatccctgaatacaatgcatggaaggacagccagccc
aaccacaaatcttggagaacaaaatactacaaaggtttgggaaccagcacatcgcaggaa
gccaaggagtacttctctgatatgcagaaacaccgtatcccattcaagtactctggacct
gaagatgatgaagctatcacccttgcctttagcaagaagaaagtggaagagcgtaaagtg
tggctgaccaacttcatgctcaacaggcgtcagcgcagggctcacaacctgccagaggag
tacctttacagtcagtccaccaagtccctctcttacaacgactttgtcaacaaggagctg
gtacttttctccaactcggacaatgagaggtccatccccagcctggtggacggtctgaaa
ccaggccagaggaaggtcctgttcagttgcttcaagaggaatgacaagcgggaggtgaag
gtggcccagttggccggctcggtggctgagatgtcagcctaccatcatggagaggtctct
ctgatgatgaccattgttggcttggcccagaactttgtgggaagcaacaacttgaacctg
ctgcagcctctgggtcagtttggaaccaggttacatggtggcaaggactctgccagccct
cgatacatcttcaccatgctcagccctctggcccgccttgttttcccaaccgtggatgac
aacctgctcaagtacaacattgatgataaccagcgtgtggagccggagtggtacatgccg
atcatccccactgtgctggtgaacggtgccgagggtatcggcacaggctgggccagcagg
atccccaactacgacattcgagagatcgtcagcaacatccaccgtatgctcaatggggac
gagcctctgcccatgcttccaaactacaaaggcttcaaaggcacgcttgatcaggtgttg
gacaaccagtttatcaacagtggagaggtggccatcattgattccaccaccattgagatc
tctgagttgcctgtcaaatcctggacgcagtactacaaggagaacgtgctggagccaatg
atgacaggcacagagaaggtccctcctctgatcacggactacaaggaatatcacaccgac
accaccgtgcgctttgtggtcaagatgacaacagagaagctgagtgaggcagaggctgct
ggcctccacaaagtcttcaaacttcagaacaccatcacttgcaattctatggttctcttt
gaccatgtgggcagcctgaagaagtatgagtctgtgcaggatattctcaaggacttcttt
gagctgaggatgaattactatgtgctgagaaaggattggttggtcggcatgctgggggca
gagagtgctagactcacaaaccaggcccgcttcatcttggagaaaatcgagggcagcttg
gtcattgagaacaagccaaagaaggaactgattcgcatgctgcagcagatgggctacgac
tctgacccagtcaaggcttggaaacaggcccaagagaagaatgtggacgtggtggaggaa
gaagtggaggaaggagcggaggaaggagcggaggaggaggacaccagcgggccagactac
aactacctgctgagcatgcccatgtggtacttgagcaaagaaaagaaagatgagctgtgc
aaacagcgggatgctaagatgacggagctcgacatcctgaagaagaaggctccaacagac
ctgtggaaggaagaccttgctgctttctccgaggaactggagagaattgaggcaaaagaa
aagaaggatgccgaaatgcctgttgttaaaaagggggccggaaaaggcaaagcgatgaag
gtgaagctggagactctgcccacgccgcaaggtcgccgcgttgtcccgcgcatcaccagc
accatgaaggctgaagccaacaggaaggcttgtcttaggagaggagaaggcaagaagggc
agaaaagtcaagtctgaagattgcgtggtgaagatggagtttggagatgatgcagagaac
gaggtgccgagtgaggagattggtttggctgcacgactgggcaagaagcctagaacccag
gcaaaggaaacggaagcatcaaagaccagcaggcagagcactcttcagttcaaggctgtg
accaagaagcccaaaaagaatccgtggtcggatgaggattcggatgccaatctgtctgag
agtgaaatggaggcagaggaagtggtcgcccccagggagaaagtggaacgcaaaactaaa
gctgcggtgaagtacagtatgtccgacagtgaaaatgaatttgatgactgggggaagaag
gacgctccaaaacagagagctgttaccagtgatgatgatgatgatagctttatcccacag
cccatggctgacagcgacgtggactctccagccccacctcccaaagctccagaacccaca
aagaaaacgagcaaaacgacagttaaacaagctaaagccaagtcgagctctcagtcggat
gatcagttgcctgcacccaaagctccagctcaacgtaaaaccaaggaggctgcacccaag
aaagctgctgcacccaagaaagctgctgctcccagaaaacctgctgcatccaaaaagaag
gctgcagatgtgaagcagccatccatcctagacgctctttctaagcccaaacctgcgtcc
accacggctgctaaggtctcttcatttgactccagtgactcagagagtgaagccaaagct
ccagttacaaaggcgaaacccgttttgaaacgaaaaaaggccatcagcgacgaatctgac
agcagctcaggcgacctcatgtcacgcctcaaggccaaaaccactgccagcaagaaaacc
aagaactgggaggaggacgacagcttccaggtttcagaccaggacgcagcaactcccgtc
gccgtggcagcgcgaaacaagccctcacgtgcccggaaacctatgacctacaaaattgac
tccgactcagatgaagacttttaa
DBGET
integrated database retrieval system
