Anoplopoma fimbria (sablefish): 129091036
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Entry
129091036 CDS
T09102
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04136
Autophagy - other
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129091036
04136 Autophagy - other
129091036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129091036
03029 Mitochondrial biogenesis [BR:
afb03029
]
129091036
Membrane trafficking [BR:
afb04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
129091036
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129091036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
CPSF_A
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_IFT80_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
129091036
NCBI-ProteinID:
XP_054454434
LinkDB
All DBs
Position
5:complement(5490103..5497900)
Genome browser
AA seq
446 aa
AA seq
DB search
MESQESQDAPDGTDVHRAFICASFNQDTTSLSVGTKTGYRLFSVTAVDKLDCIHEGVECP
DVYIVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLE
ESVYIHNIKDMKLLKTLLNTPINPTGLCALSVNHSNSYLVYPGSATIGEITVYDANNLST
LTLIQAHDSPLAALTFNASGNKLASASEKGTVIRVFSVPEGQRLFEFRRGMKRYVSISSL
SFSADTQFLCASSNTETVHIFKLEQHSPSQDEESPTWSAYMGKMFTAASTYLPSQVSDMM
HQDRAFATVRLNMFGLKNISALATIQKLPRLLVASSDGCLYIYNVDPQDGGECVLIQKHR
LFDTNEEQVEQKEEEVPEDVSPQPASQSYAATVALPSTPPSSTTLMGYSEEGGAQKGEVI
PEHEFAESPVCLDDENEFPPFGNQSN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaggagtcccaggacgcaccggacggcaccgacgttcaccgagccttcatc
tgcgcctcgttcaaccaggacaccacttctctgtctgttggcacaaagaccggctaccgg
ctcttctcggtcactgctgtggacaaactggactgcatccatgaaggagtagagtgtccg
gatgtttatatagtggagcgactgttctccagcagcctggtggtggtggtcagtctgtcc
atgccccggcgaatgaacgtttaccacttcaagaaaggtacagagatttgtaactacagc
tactccaacaacatcctctctgtccggctcaacagacagcggctggtggtgtgcctggag
gagtcggtctacatccacaatatcaaagacatgaaactactcaaaaccctgctgaacaca
cccatcaaccccacaggtctttgcgctctctccgtcaaccacagtaactcctacctggtg
tatcctggcagcgccaccatcggagagatcactgtatacgacgccaacaacctgagcacc
ctgacgctgatccaagcccacgacagtcccctggccgccctcaccttcaatgcctctggc
aacaaactggccagcgcttcagagaagggcaccgtcatcagagtcttcagcgttcctgaa
ggacagagactctttgaattccgcagaggcatgaaaagatatgttagcatcagttcactg
tccttcagcgccgacacccagttcctgtgcgcctccagcaacactgagaccgtccatatc
tttaaactggagcagcacagccccagtcaggacgaggagtctcctacatggtcagcatac
atgggcaaaatgttcacagcagccagcacctacctgcccagccaggtgtccgacatgatg
catcaggacagagccttcgccacagtgcggctcaacatgtttggcctgaagaacatcagt
gctctggctacgattcagaagttacctcgtctgctggtggcgtcctcagacgggtgtctc
tacatttataatgtggatccacaggatggaggcgagtgcgtcctgatccaaaaacacagg
ctgtttgacaccaacgaggagcaggtggaacagaaggaagaggaggttccagaggatgtc
tctccccaaccagccagccaatcctacgctgccactgtggctctcccttcaaccccaccc
tcctccaccactctcatgggttactctgaggaaggtggagcccagaagggtgaggtcatc
cccgagcacgagttcgccgagagccctgtctgtctggacgacgagaacgagttccctccg
ttcggcaaccagagtaattga
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