KEGG   Anoplopoma fimbria (sablefish): 129091085
Entry
129091085         CDS       T09102                                 
Symbol
itgb3b
Name
(RefSeq) integrin beta-3b
  KO
K06493  integrin beta 3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03266  Virion - Herpesvirus
afb04081  Hormone signaling
afb04145  Phagosome
afb04148  Efferocytosis
afb04510  Focal adhesion
afb04512  ECM-receptor interaction
afb04810  Regulation of actin cytoskeleton
afb04820  Cytoskeleton in muscle cells
afb05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    129091085 (itgb3b)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    129091085 (itgb3b)
   04512 ECM-receptor interaction
    129091085 (itgb3b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129091085 (itgb3b)
   04148 Efferocytosis
    129091085 (itgb3b)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129091085 (itgb3b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129091085 (itgb3b)
   04810 Regulation of actin cytoskeleton
    129091085 (itgb3b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129091085 (itgb3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129091085 (itgb3b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129091085 (itgb3b)
   04515 Cell adhesion molecules [BR:afb04515]
    129091085 (itgb3b)
   04090 CD molecules [BR:afb04090]
    129091085 (itgb3b)
Membrane trafficking [BR:afb04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    129091085 (itgb3b)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129091085 (itgb3b)
Cell adhesion molecules [BR:afb04515]
 Integrins
  Integrin beta subunits
   129091085 (itgb3b)
CD molecules [BR:afb04090]
 Proteins
  129091085 (itgb3b)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN EGF_Teneurin
Other DBs
NCBI-GeneID: 129091085
NCBI-ProteinID: XP_054454518
LinkDB
Position
5:13008756..13025995
AA seq 795 aa
MGALPARRILWMCVLIFTGITGVWGSNVCTSRGASTCKQCLAVHPSCAWCLQEDFGQGVA
SSSRCDLKSNLVAAGCAASALESPTSKLQVLEDRPLSNKAAGATQDVTQIKPQKLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPKEAVKNPCFSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEEVGWRPGASHLLIFTSDAKTHVALDGRLAGIVQPNDGQC
HLNSENMYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGELIPGVKSCSGLKIGD
TVSFSVEARARGCPKQKKKTFIIKPVGFKDSLSVTVNFECDCKCQTKTQLNSPKCNQGNG
TYECGICLCHPGRLGPHCECAEGDYNPTEQDRCSGPAGSGGPQSAICSGRGDCVCGQCVC
HSSDFGKIWGKLCECDDFNCLRYKGELCSGHGECNCGFCQCAPDWQGENCNCSRRTDTCM
SNLGLLCSGRGQCLCGACECTQPGAYGVTCDKCPTCPDACTMKKECVECKHFKRGKLFDD
NTCSRICKDEIVLVDDIVLHDKNAVNCTYKDEDDCVERFQYYEDSSGKSILFVVKEPDCP
KGPDILVLLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYR
GATSTFTNITYRGKD
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgggtgctctccctgcgcgaaggatattatggatgtgtgttttgatcttcactggaata
acaggagtttggggttcaaacgtctgcacctcgagaggggccagcacatgcaagcaatgt
ctggctgtgcaccccagctgtgcgtggtgcttgcaggaggacttcggccagggagttgcc
agttcttcccgctgtgatctcaagagtaacctggtggcagcgggctgtgctgcgtcagct
ctggagtctccaaccagcaaactgcaggtgcttgaggaccggcccctcagcaacaaggca
gcgggggccacgcaagacgtcacccagataaagccccagaaattacacatcaccctcagg
ccagatgatgctaagcgtttcacggtgaaggtgcgtcaggtggaggactaccctgtggat
ctctactacctcatggatctctcctactccatgaatgatgatctcttccgcctgagaaca
ctgggcaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttt
ggggcttttgtggacaagccgctctcgccttacatgtacatctcccccaaagaggctgta
aagaacccctgcttcagcatcaacaccacctgcctgcctcagtttggctacaaacacgtt
ctgtccctgacggaggaggtgggccgcttcacagaggaagtcaagaagcagatggtgtcc
aggaaccgagatgccccggagggaggctttgatgccatcatccaggctgctgtgtgcaag
gaggaggtcggctggcgccccggtgcatcccaccttctgatcttcacttcggacgctaag
actcacgtggctctggatggtcgtctggcgggaatcgtgcagcccaacgacgggcagtgc
cacctcaattctgaaaatatgtacagcatgtctaccaccatggattacccatcattagct
ctgattacagagaagatgtcggagaacaacatcaacctcatctttgccgtcaccaaccct
gtggttcctctgtaccagaactacagtgagctgattcctggcaccacagtaggaacactg
tccaacgactcgggcaatgttattcagctcatactgaaggcgtacgctaaaatccgttcc
aaggtggagctggagcttcaaggcgtcccggaggagctgtccctctcctttaacgccacc
tgtctgaatggagagctcatccctggcgtcaaatcctgctctgggctcaagataggagac
acggtctctttcagcgtggaggccagagctcgaggttgccctaaacagaagaagaaaacc
ttcatcataaagcctgtgggcttcaaggactccctctccgtcaccgtcaactttgagtgc
gactgcaagtgccagaccaaaacccagctcaatagccccaaatgtaaccaaggcaacggc
acttacgagtgtggcatctgcctgtgccacccgggtcgcttagggcctcactgcgagtgt
gccgagggtgattacaaccccacagagcaggaccgctgcagcggaccggcgggctctgga
ggacctcagtctgccatctgcagcggccgtggtgactgtgtgtgcggccagtgtgtgtgc
cacagcagtgatttcggaaaaatctggggaaagctgtgtgagtgtgatgacttcaactgc
ctgcgctacaagggggaactgtgctcaggccacggggaatgtaactgtggcttctgccag
tgtgcaccagattggcagggtgagaactgtaactgctccagacgcactgacacctgtatg
tccaacctgggcttgttgtgcagcgggaggggccagtgtttgtgcggggcctgtgagtgc
acccagcccggtgcctacggagtcacatgtgacaagtgccccacctgcccggacgcctgc
accatgaagaaggagtgtgtggagtgtaaacacttcaagaggggcaagctgtttgatgac
aacacgtgctctcgaatctgcaaggatgagattgtgcttgtggatgatatagtgcttcat
gataaaaatgctgtgaactgcacttacaaagatgaggatgattgcgtggagcgtttccag
tactatgaggactccagtggcaagtccatcttgtttgtggtcaaagagcccgactgcccc
aagggtccagacattttagtcttgctcctttcggtggcaggagccatcttgttcctcggc
ttggcggctctgcttatctggaaacttctggtcaccatccacgacagacgggagttcgcc
aaatttgaggaagaacgtgctcgagccaaatgggacacgggacacaaccctctctataga
ggagccacatctaccttcacaaacatcacatacagaggaaaagactga

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