Anoplopoma fimbria (sablefish): 129091096
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Entry
129091096 CDS
T09102
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129091096 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129091096 (smarcd2)
03036 Chromosome and associated proteins [BR:
afb03036
]
129091096 (smarcd2)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129091096 (smarcd2)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129091096 (smarcd2)
PBAF complex
129091096 (smarcd2)
GBAF(ncBAF) complex
129091096 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129091096
NCBI-ProteinID:
XP_054454536
LinkDB
All DBs
Position
5:complement(15892982..15902435)
Genome browser
AA seq
496 aa
AA seq
DB search
MASRGGFSPMSLSSSSMSVGHAAAGMRLPGLPQPPAGYPRTQYPQRPGMPSNRVGGPMGS
MGGQLPGPSYGGGNMPMRQGMGPPSMDASRKRFLHLQQQQQQEALGGLRRGAKRRKMADK
VLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYISNTYT
PSKPEGDEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWH
RMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQAL
WLYIKNNKLQDCHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPIIINHMISV
DPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHETIEYINQLKTERD
FMLSFSNKPQDFIQDWLKSQCRDLKLMTDVTGNPEEERKTEFYQAPWVPEAVGRYVYSRL
QQRRQELEQVLGIRLT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggagggttctctcccatgagtctgagctccagctccatgagtgtcgga
cacgctgctgcaggcatgaggttgccaggtttgccccagcctcctgcaggatacccccgg
acccagtacccccagcgcccagggatgccatccaacagagtagggggccccatggggtca
atggggggtcagctgcctggtccttcttatggtggtgggaacatgcccatgcggcaaggc
atggggcctccaagcatggacgcctcaaggaaacggttccttcatctccagcaacagcag
cagcaagaggcactgggaggcctaagacgaggagcaaaaagacgcaagatggctgacaag
gttctcccacagaggatccgagacctggtcccagagtcccaggcctacatggatctcttg
gcgtttgagaggaaactggatcagaccatcgcccgtaagcgtatggagattcaggaagcc
atcaagaagcccattatgcaaaaacgtaagctcaggatctacatttctaacacgtacact
cccagcaaacccgagggtgatgaggcagagaaggtgtcctcctgggaactgagagtggag
gggaaacttctggaggaacctggcaagcagaagaggaagttctcatctttcttcaaaagc
ctggtgattgagcttgataaggagctctatggacctgacaaccacttagtagagtggcac
agaatgcccactactcaggagacagacggtttccaagtcaaaaggcccggcgacgtgaac
gttaaatgcaccctcctgctcatgctcgaccaccagccccctcagtacaaactggaccca
cggctggctcgtctgctgggtgtgcacacacagacgagagccagcatcatgcaagccctt
tggctctacatcaagaacaacaagctgcaggactgtcatgagaaggagtacatcaactgc
aaccgctatttcagacagatcttcggctgtcctcgcatgaggttctctgagattcccatg
aagctggccggcctgctgcagcaccctgaccccatcattatcaatcacatgattagtgtg
gaccccacagatcagaagaagacagcgtgctatgacatcgatgtggaggtggatgacccg
ctgaagggccaaatgaacagcttcctgtcctctacaaccaaccaacaggaaattgctgcg
ctggagatgaagattcacgagacaattgagtacatcaaccagctgaagaccgagagagac
ttcatgctgagcttcagcaataaaccacaggacttcatccaggactggctcaagtctcag
tgcagagatctgaagttgatgacagatgtgacaggaaacccagaggaggagaggaaaact
gagttctaccaggctccctgggtaccagaggcagtggggagatacgtttactccagattg
cagcagagaagacaagagctggagcaggttttgggtatccgactcacctaa
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