Anoplopoma fimbria (sablefish): 129091131
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Entry
129091131 CDS
T09102
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
afb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129091131 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129091131 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129091131 (abcd1)
Enzymes [BR:
afb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
129091131 (abcd1)
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
129091131 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
ORC-CDC6-like
SMC_N
Adeno_IVa2
Rad17
AAA_15
AAA_5
NACHT
AAA_7
AAA_18
Motif
Other DBs
NCBI-GeneID:
129091131
NCBI-ProteinID:
XP_054454599
LinkDB
All DBs
Position
1:complement(180716..214470)
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AA seq
856 aa
AA seq
DB search
MQPTYQELTAQLRRSSRLRKLTAALFVAYAVKKLTPFVWRRIQRSAAGKQVGGVDVPVGV
VSCVGGGKKKRDSRSPSVNKEFILRLSRLLKLLFPRLLSPEVGLLALHSVTLMSRTFLSI
YVAALDGVIVRCIVQKDPQAFMLQLSKWLLVAVPATFINSTIRFLEGQLALRFRSRLVDH
SYQLYFTNQTYYRVSNMDGRLSNPDQSLTEDIVMFSASVAHLYSNLTKPILDVVVTCYTL
LRTAQSKGANTTWPSVIAGLVVALTAKVLRSCSPRFGKLVAEEAKKKGDLRYMHSRIIAN
SEEIAFYGGHKVEMAQLQRSYMSLSSQIHQILLKRLWYVMLEQFLMKYVWSASGLVMVAV
PIITATGYSQYDSEEVKQAALVMKEEELVSERTQAFTTARNLLNAAADAVERIMSSYKEV
TELAGYTARVSEMLDVFEEVTEGVYRRSADGEEVTEGAVVQHGHRLCGRLEIRGQVISVE
KGIRCENLPIITPTGDVVVSSLNIQVDENMNVLITGPNGCGKSSLFRILSGLWPVYGGVL
YRPDPQYMFYIPQRPYMSEGTLRDQVIYPDSVEDMVQRGLTDSDLDQILRTVHLVYILDR
EGGWESVSDWKDVLSGGEKQRMGMARMFYHRPRYALLDECTSAVSIDVEGKIFQAAKDAG
ISLLSITHRPSLWKYHSHLLQFDGEGGWKFEPLDASTRLSLQDEKQRLENQLSGIPKMQQ
RLTELCVLLGERRLSESLEPPDRSDPVGPQSSDHTRPHQTTPDQTRPDKTEPQWNTAMET
KRSPDEEGSSSSSSLLSFHVRGCLDSFLLSLSNIDISASGTLLSEIRSGSQEDLDLRRIR
SARPHAEVSLRSDLSL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgacctatcaggagctgacggctcagctgaggcggagctccagactcaggaag
ctgacggctgcactgtttgtggcctacgctgtcaaaaaactgaccccctttgtctggagg
aggatacagaggagtgcagcaggtaaacaggtgggcggggtcgatgtacctgtgggcgta
gtcagctgtgtgggcggaggaaagaagaagagagacagcaggtctccatcagtgaacaag
gagttcatcctcagactgtctcgtctgttgaagctcttgtttccacggttactgagtcca
gaggtcggcctcctcgctctgcactctgtcaccctgatgtccagaaccttcctgtccatc
tacgtggctgctctggacggtgtgatagtgaggtgcatcgttcagaaggaccctcaggcc
ttcatgctgcagctctctaagtggctccttgttgccgttcctgccaccttcatcaacagc
accatcaggttcctggaaggtcagctggccctcaggtttaggagccgattggtcgaccac
tcctaccagctgtacttcaccaaccagacgtactaccgagtcagcaacatggacggccgt
ctgtccaatccggatcagtctctcactgaggacatcgtcatgttttcagcctcagtcgct
cacctgtactccaacctgaccaaacccatcctggacgtggtggtgacctgctacaccctg
ctgcggaccgcacagtccaaaggagcgaacaccacgtggccgtccgtcatcgccggcctg
gtggtggcgctcaccgcaaaagtccttcgctcctgctcgcctcgattcgggaagctggtg
gccgaggaggccaagaagaaaggagacctgagatacatgcactcacgcatcatcgccaac
tccgaggagatcgccttctatgggggtcacaaggtggagatggcccaactgcagaggagc
tacatgtccctgtcctctcagatccatcagattctgctgaagcgtctgtggtacgtcatg
ctggaacagttcctcatgaagtacgtatggagcgcctccggcctggtgatggtcgctgtg
cccatcatcaccgccacgggatactcacaatacgactctgaggaggtgaagcaggcggcc
ctggtgatgaaggaggaggagctggtgagtgagaggacacaggccttcaccacggccagg
aacctcctgaacgctgcagccgacgctgtggagaggatcatgagttcatacaaggaggtg
acagagctggccggatacacagctcgggtctctgagatgctggacgtgtttgaggaggtg
actgaaggagtgtaccggcgctctgcagacggagaggaggtgactgaaggagctgtggtt
cagcacggacacagactgtgtggtcgtctggagatcagaggtcaggtgatcagtgtggag
aaggggattcgctgtgagaacctgccaatcatcacaccgaccggagacgtggtggtctct
agtctcaacatccaggtggatgagaacatgaacgtactgatcaccggtccaaacggttgt
gggaagagttctctgttcaggatcctcagtggactgtggcctgtttatggaggagtcctg
taccgtccagatccacagtacatgttctacataccccagagaccctacatgtcagagggg
accctcagggaccaggtgatctacccggactccgtggaggacatggtccagagaggactc
acagattcagatctggatcagatcctcaggacggtgcacctggtctacattctggacaga
gagggaggttgggagtcggtcagcgactggaaggacgttctgtcaggaggagagaagcag
aggatggggatggcccgcatgttctaccaccgtcctcgttacgctctgttggatgagtgt
acgagcgccgtcagcatcgatgtggagggaaaaatcttccaggctgcaaaggatgctggg
atatccctgctgtcgatcacacacagaccctccctgtggaagtaccactctcacctgctt
cagtttgatggagaaggaggatggaagtttgagcctctggatgcgtcgacccgtctgtct
ctgcaggatgagaaacagcgtctggagaaccagctgtccgggattcccaagatgcaacag
agactcactgagctgtgtgtgctgctgggggagagacggctgtcggagtctctggagcct
ccggaccggtcggaccctgtcggaccgcagagctcagaccacaccagaccacaccagacc
acaccagaccagaccagaccggacaagaccgaaccccagtggaacacggccatggagacg
aaacgttctcctgatgaagaaggttcctcctcttcctcctcactgctcagtttccacgtc
agaggttgcctcgacagtttcctcttgagtctctccaacattgacatcagtgcatcagga
actctactttctgagatcagatctggatctcaggaggatctggatctcaggaggatccga
tcagccagaccacatgccgaggtgtcattgagatctgatctcagtctgtaa
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