KEGG   Anoplopoma fimbria (sablefish): 129091186
Entry
129091186         CDS       T09102                                 
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    129091186 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129091186 (wdr24)
Membrane trafficking [BR:afb04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    129091186 (wdr24)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_HPS5 ANAPC4_WD40 zf-RING_16 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 129091186
NCBI-ProteinID: XP_054454673
LinkDB
Position
5:complement(6347267..6353193)
AA seq 789 aa
MEKMSRVTTAHSSSAISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYALEEDQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ATFENGNVQVWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTT
RAKEIYCVQTIASVARVKWRPEKKFHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHQHDPHFLLSGSKDSTLYQHMFKDATRPVDKANPEGLCFGLFGDLAFAAKESLI
SSDANRKPYPGGDRRYPIFFFKKPDPTEQFAHVSSALSVFETDLDSNRMDWFVKTAQLYL
LCGKPFAELCDHNAKVARELKRPQVSTTWTMLRIMFSDPANPTTPGLSHNLSKLGTLPLM
NSFNMKEMSSGMGTESRLERSKGESRQDNIHLEPGNLHISNNNEENEETEGSEGQAEYMF
GDAELDDDDLYSMEHDNQTEEQECTLPQEAFQLRHEIMDNPSAPEHLQQDKADSPHVSGN
EAEVTCLTPIESFSLISISQPLFSPHLPSSFFCPIVREMLSYYAEQGDVQMAVSVLIVLG
DRIRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQASTTLHINCSN
CKRPMSNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHIMNWLKSSAHCPA
GCGHLCEYT
NT seq 2370 nt   +upstreamnt  +downstreamnt
atggagaagatgtcacgtgttaccacagcccacagcagcagtgccatcagtggccggact
atgttctgccacttggacgctcctgccaacgccatcagcgtgtgccgggacgccacgcag
gtggtggtagcgggccgcaacatcttcaagatctacgctctggaggaagaccagtttgtg
gagaagctgaatctacgagtcggccgcaaaccatctctcaactttagctgtgcggatgtc
atgtggcaccagatggaggagaacctgcttgctactgctgccaccaatggggcagtggtc
acctggaacctggggaaaccctctcgtaacaagcaggaccagctctttactgagcacaaa
cgcactgtcaacaaggtgtgcttccatcccacagaggtttacatgctgctaagtggctca
caggacggcttcatgaagtgctttgacctgcgcaagaaggagtcggtcagcactttctca
ggtcagtcagagagtgtaagggatgtccagttcagcatgaaggattatttcacatttgct
gcaacctttgagaatggcaacgtccaggtttgggacatcaggcgaccagaccgctatgag
cgaatgttcaccgcccatactggccctgtgttctgctgcgactggcaccctgatgacagg
ggatggctggcgacagggggcagggacaagatggtgaaagtgtgggacatgaccacaacc
cgggcaaaggagatctattgtgtccagacaatcgcctcagtggcgcgggttaagtggcgg
cctgaaaagaagtttcatttagccacctgttccatgatggttgatcacaacatctacgtc
tgggatgtccgcagacctttcattcccttcgccacatttgaggaacacaaggatgtaaca
actggtattgtgtggcgccaccagcatgaccctcatttcctgctctctggctctaaggac
agcacactctaccaacacatgttcaaggacgccactcgtcccgtggacaaggcaaacccc
gagggtctgtgctttggactgttcggtgacttggcctttgcagccaaggagagtctgatt
agcagcgacgccaatagaaagccttaccctggaggcgaccgacgctaccccatctttttc
ttcaagaagcccgacccgacagagcagtttgcccacgtgtccagcgcccttagtgtcttt
gagacagacttggacagtaaccgcatggactggtttgtcaagactgcacaactctacctc
ctctgtgggaagccctttgctgagctgtgtgatcacaatgccaaggtggcccgggagctc
aaaagacctcaggtttccacaacatggaccatgttgagaattatgttctcagatccagca
aaccccacaactcccggtctaagccacaacctcagtaaacttggcaccttgcctttaatg
aacagtttcaacatgaaggaaatgagctcagggatgggcacagagagcagactggagcgc
agtaaaggtgagagcaggcaggacaacattcacctggagccggggaacctgcacatcagc
aataataatgaagaaaacgaggagacggagggcagcgagggccaggctgagtatatgttc
ggggatgctgagttagatgacgacgacctctactctatggagcacgacaaccaaacagaa
gagcaggagtgcacgctaccccaggaggccttccaactgcgccatgagatcatggataac
ccgtctgctccagagcaccttcaacaggacaaggccgactccccgcacgtcagcggcaac
gaggcagaggtcacttgtctgacacccatcgagtccttctcccttatctccatttcacaa
cccctgtttagcccacatttaccctccagcttcttctgtccaattgtgcgggagatgctg
agctactacgccgagcagggcgatgtgcagatggccgtgtccgtgcttatcgtcttgggg
gacaggatccgcaaagagattgatgacctcacacaggagcactggtacatgtcctacata
gacctgctacagcgatttgagttgtggaacgtgtctaatgaggtcatcaaactgagtacg
tgcagcgccatcacctgcctgaaccaggcgtctacaacacttcacatcaactgcagcaac
tgtaagcggccaatgagcaacaggggctggatttgtgacaggtgccaccagtgtgccagt
gtatgtgcagtgtgccaccatgtggttaagggactgtttgtgtggtgtcagggctgcagc
cacggtggacatctggagcacatcatgaactggctcaagagcagcgcccactgtcccgcc
ggctgcggccacctgtgcgagtacacctga

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