Anoplopoma fimbria (sablefish): 129091201
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Entry
129091201 CDS
T09102
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129091201 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129091201 (abca5)
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
129091201 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
129091201
NCBI-ProteinID:
XP_054454695
LinkDB
All DBs
Position
5:complement(10604903..10627423)
Genome browser
AA seq
1676 aa
AA seq
DB search
MYFIPEASIRETTSRPYVIQMRNAGSMTPMYRRDAGVWHQTRSLLYKNLLIKWRTKQQSL
QELILPLLLLGLLILISTLNPHVYYGGINTVELERDDHFLKGLGYTPINNITNHIMEEVA
QEMHMQDRLEMFASEEDLENASLYEPSSYVGVVFMDSSATSYRIRFPYSQLPLPSDYTES
IANCYTSSLNCRAANYWYSGFIRLQSLIDAAIIQMQTKRSVWSEMDLQVVMMGQPGSVEV
QKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTSFWLSWGLLYAAL
VTTMSFLMSIIATYTALFPNSDFLVVFFLIFLYGISSIFFSFMLTPLFKKPKFASTVGSM
LTVVFGCLSLFTVLMKDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLANGP
HPLYVPLLMLVVDCFLYLLLAIYLDQVLPGEFGMKRSLVYFLKPSYWSKRRKRYVEVSSV
YDTDVKGAPGVDESVEPVSPEFRGKEAIRINNIHKVYKEKDNVVEALRGLTFDIYEGQIT
ALLGHSGAGKSTLMNILCGICPPTSGSATIYGTPVAEIAEGSDMKQLVGICPQFNIIFDV
LTVEEHLRIFAAIKGIAPSDIDAEVSKVLKDLDLEKIKTAQAKNLSGGQKRKLSVGIAIL
GDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKAVISQGQ
LKCVGSSLYLKIKCGVGYHLRMSINEGCEAEKISSLVNHHVPKAMLSRQQEAELTFTLPF
ESMDTFSGLFSELDCQPNLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNREQVEDD
CDTTSVDDTDQRLLTFSDSKSDVVSGHALWRQQFSAVAWLHMLNMRRERKAFIYTLALFL
VFVAAVLVLSLATGNIRIHSPDRQFLPIYLLKRNQAQRRYATSLLVQNSSDSDISDFIHN
LQSQDIKVDMMKHSDYMAAAPHSAAINVTGSSKGFKYSVAFNSTTVHSLPMTVNILSNAL
LRGLNGTGQIRTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTRDREIKC
RSTLRISGLVPSAYWCGQAAVDIPFYYLILSCMTIILFSFHTGSLLTSSNLTSVVLCTVG
FGPAMILFNYVFSFGFARVQSNRDFFSVISMMVCVVSASLVQLSFVNDNPELTRNLHNLL
CFFNPLYPLMGCLNCITKATFLPSLYEENFLWKNLLIAIIAPYLQCILLLFLLRWLEIRY
GGRTIDRMSSKSKPKVEKNPEEGLNEDEDVQMEKARVKEALTCQSCEEKPAVVVSNLRKQ
YKGRREGFSLNKSRKVAAKNINFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTDPTAGQIL
MGDYSTEFRPVDNPLEHVGYCPQVNPLWPRITLREHLEIYAAIKGLKGQDVPGIIKRVVN
ALELKDHLHKQTKTLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWRAIRAA
FKNRQRGAVLTTHYMEEAEAVCDRVAILVSGQLRCIGSIQHLKGKYGRGYILEVKLREEL
TGLQQVALLHKEILRIFPHAARQESFATLMVYKIPMEDVKSLSKSFSQLERAKQTFNFEE
YNFSQSTLEQVFMEFAKEQEKEEDEVGSLSTTFQWQRLRQDGSAPVNHTDSVVHQL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgaggccagcattagggagacgacttctcgtccgtacgtcatccag
atgaggaatgctggaagtatgacacccatgtatagaagagatgctggagtctggcaccaa
acaagaagtcttctctacaagaatctgctcatcaaatggagaaccaagcaacagagtctt
caggaactgatcctacctctgctactgttgggtctcctgatactcatcagcaccctgaat
cctcacgtttactatggaggcatcaacaccgtggagctggagcgtgacgaccacttccta
aagggcctgggctacacgccgatcaataacatcaccaaccacatcatggaagaggtggcc
caggagatgcacatgcaggatcgtctggagatgtttgccagtgaggaggacctggagaac
gccagcctgtatgagccctccagctatgtcggcgttgtgttcatggacagctctgccact
tcttacaggatacgcttcccgtacagccagctgcccttacccagcgattacacagaatct
attgccaactgttataccagctccttgaactgcagagcagctaactactggtactctggc
ttcatccgcctccagtctctgatcgatgcagccatcatccagatgcaaacaaagcgttca
gtgtggagtgagatggacctgcaggtggtgatgatgggtcagccaggctccgtggaggtg
cagaaattcccccacgccctcatctccatctacctggtcctggccttcacacccttcgtc
accttcctcatcgtcaatgtggcagctgagaaggaacatcgcctcaaggacaccatgacc
atgatggggctctacgacacctcgttctggttgtcatggggcctcctgtatgctgctctg
gtgaccaccatgtccttcctgatgtccatcatcgctacgtacacggcgctcttccctaac
agtgacttccttgttgtcttcttcctcatcttcctctacggaatatcatcgatctttttc
tccttcatgctgactcccttatttaagaagcccaagtttgccagcacagtgggctccatg
ctgacggtggtgtttggctgcctgtctctgttcaccgtgctgatgaaggacttccctcag
cctctggtctggcttctctgcctgctctcccccagcgccttctcaatcgggatcgcacag
gtggtttacctggaggcccagggagatggtgctgtgttttcctcgctggccaacggccct
catcctctttacgtgcccctgctcatgctggttgtggactgcttcctctaccttctgttg
gctatctacctggaccaggtactgccgggtgagtttggaatgaagaggtccttggtgtac
ttcctgaagccatcctattggtccaaacgcagaaagcgctacgttgaagtgagctcggtg
tacgacacggatgtgaaaggagctcctggtgtcgacgagtctgtcgagcccgtttcccct
gagttcagagggaaagaggccatccgcatcaacaacatccacaaagtgtacaaagagaag
gacaacgtggtggaggcgctgagaggtttgacgtttgacatctatgagggccagatcacg
gctctgctgggacacagcggagccggaaagtccactctcatgaacatcctgtgtggcatc
tgcccgcccactagcggctcggccaccatctacggcacccccgtagcagagatcgctgag
gggtcggacatgaagcagctggtgggaatctgcccccagttcaacatcatctttgatgtg
ctcactgtggaggagcacctgaggatatttgctgccatcaaagggatcgcaccctcggac
atcgacgctgaggtatccaaagtcctgaaggatctggacttggagaagattaagactgct
caggccaagaatctgagtggaggccaaaagaggaaactctctgtgggcatcgccattctg
ggagatccaaagatcctgctcttggacgagcccacagcaggcatggacccctgctccagg
caccaggtctggtccctgctgaagagccgcagggccggcagggtcactgtcctcagcaca
cactacatggacgaggctgacattcttgctgatcgcaaagctgtgatctctcaaggacag
ctgaaatgtgtcggctcttctctgtatctcaagatcaagtgtggtgtgggatatcatctc
agaatgtcaatcaatgaaggatgtgaagctgaaaagatctcgtcacttgtcaaccaccat
gttcccaaagcaatgttatctcgacaacaagaggcagagttgacattcacgctgcctttt
gagagcatggacacattttcaggcttgttctcggagctcgactgtcaacccaatctggga
attatcaactatggggtttccatgacaacactggaggatgtttttcttcgcttggaggct
gaggctgaagtggaccaagctgactacagtgtgttcaaccgggagcaggtggaggacgac
tgtgacaccacctctgtggacgacacagaccagcggctgctgacgttctcggacagcaag
tcagacgtggtgtcgggtcacgctctgtggcggcagcagttcagcgccgtggcctggctg
cacatgctcaacatgcgcagggagaggaaggccttcatttacactctggccttgttcctg
gtgtttgttgccgcagtgctcgtcctatctctggccacaggaaacatccggatccactcc
ccagaccgtcagtttctgcccatttacctcctcaaaagaaaccaggcacagcggagatat
gccaccagcctcctggttcagaactcctcagactctgatatttctgacttcattcacaac
cttcagtctcaggacatcaaagtggatatgatgaaacacagcgactacatggctgcagct
ccacacagcgctgccatcaacgtaacaggatccagcaagggtttcaaatacagtgttgcg
ttcaacagcaccacggttcactccttgcctatgactgtcaatatactaagcaacgctctt
ctaagaggactgaatggtactggacagatcagaacctggaccaaaccatttgattatcaa
atcccagatgctacgtcctacgctctggtgtacatagaggccatcatactgggaatgctg
gcagccggaatgcctgcgtattttgcaatggaccacactcgagaccgagagatcaagtgt
cgctcaacgctacgtatctctggtctggtgccgtcagcctactggtgcggacaggccgct
gtggacatccccttctactacctcatcctctcctgcatgaccatcatcctcttctccttc
cacactggaagcctgctcacctccagcaacctcacctctgtggtcctgtgtactgtcggc
tttggtccagccatgatcctcttcaattacgtgttttcttttggcttcgctcgggtccag
agcaacagggatttcttctctgtcatctccatgatggtgtgtgtggtgtcggcctcgctg
gttcagttgtcatttgtgaacgacaaccccgaactgaccagaaatctgcacaacctcttg
tgtttcttcaaccctctgtatcctctcatgggctgccttaactgtatcaccaaggcaacc
ttcctcccctctctgtatgaggagaacttcttgtggaagaaccttctcattgctattata
gctccgtatctccagtgcatcctgctgcttttcctgcttcgttggcttgagatccgttac
ggagggaggacaatcgacaggatgtcgtccaagtcaaagcccaaagttgagaaaaaccct
gaggaagggctgaacgaggatgaggatgttcagatggagaaggccagagtgaaggaggcc
ctcacctgccagtcctgtgaagagaaaccagccgtggttgtgagtaacctgaggaagcag
tacaaaggtagaagagaaggtttctctctgaacaagtcgaggaaagtggccgcaaagaac
atcaatttctgtgttcgcaaaggtgaagttcttggactgttgggcccaaacggagcagga
aagagcaccatcatgcacatgttgtcaggtgacactgacccgaccgccggccagatcctg
atgggtgactacagcacagagttccgtccggtggacaatcctctggagcatgtgggctac
tgtcctcaggtgaaccctctgtggccccggatcactctgagggagcacctggagatctac
gctgccatcaagggcctgaaagggcaggacgtaccaggcatcatcaaacgtgtggtgaac
gctctggagctgaaggaccatttacacaaacaaaccaagaccctgtcagctggactcaag
aggaagttgtgctttgccttgagtatgattgggaatcctcagatcgtcttactggatgag
ccgtcttcagggatggaccccaagtctaaacagcgcatgtggagagccatacgtgctgct
ttcaagaaccgtcagcgtggagccgtcctcaccacgcactacatggaggaggccgaggcc
gtgtgcgaccgcgtggccatcttggtgtccggccagctgagatgtatcggctccatccaa
cacttaaaagggaaatacggacgaggttacattttggaggtgaaactcagagaggagctg
acggggctccagcaggtggcgctgctgcacaaggagatcctccgaatctttccacacgcc
gcccggcaagagagctttgctactctgatggtttacaagatccccatggaggatgtgaaa
tcactgtccaagtctttctctcagttagagagagccaaacaaaccttcaactttgaagag
tacaacttctcccagtcgaccttggagcaggtgttcatggagttcgccaaggagcaggag
aaggaggaggacgaggtcggctccctcagcaccaccttccagtggcagcgtctgcgccag
gacggctccgcccccgtcaaccacacagacagcgtcgtgcaccagctgtga
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integrated database retrieval system
