Anoplopoma fimbria (sablefish): 129091202 Help Entry 129091202         CDS       T09102                                  Symbol msh2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     129091202 (msh2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:afb03400]     129091202 (msh2) DNA repair and recombination proteins [BR:afb03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      129091202 (msh2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_I MutS_II AAA_27 Motif Other DBs NCBI-GeneID:  129091202 NCBI-ProteinID:  XP_054454699 LinkDB All DBs Position 5:18609904..18624009 Genome browser AA seq 935 aa AA seqDB search MAVQPKHSLSMDGAAEQGFLSFISSMPEKPDTTFRVFDRNDFYTVHGRDATFTAREVFKT AAVIKHLGSGSRRLESVVLSKLNFEAFVKDLLLVRQYRVEVYKNHSKSSKEHDWKIDYKA SPGNLTQFEEILFGGGTGAVGCAGVVAVRFATGADGQRVVGVGYVDAAQRTMGVCEFPDN EIFSNLESLLVQISPKECLLAQGDVSTDGNKLREVVQRGGMLVSDRKRAEFSCKDMVQDL NRLLRAKRGATVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTSLDLGQYMR LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCFRVYQAVSHVPALVSAL ERYSGSYQVLLEAVFLSPLRDLQSDFVKYQEMIETTLDMNQIDHHEFLVKASFDPALSEL REKMDALEKSMQAVLNSAAKELGLDAGKTVKLESNAVLGFYLRVTCKEEKSLRNNKKFTT LDVQKNGVRFTNSKLSALNEEYTKNREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ MDVVASFAVASVSAPVPYVRPRLLEAGCRRMELKQARHPCMETDADTAFIPNDMSFTQGE KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSILARVGAGDSQVKG VSTFMSEMLETAAILRSASENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCLFA THFHELTALAAQQPTVHNLHVTALTSHNTLTMLYRVRAGVCDQSFGIHVAELACFPPSVV AMAKEKAEELEEFQEPAGEKSEQEEEPEAKRRRTDKQAGENLIQDFLEKAKSLPAATMSE DEVKAALRRMKKELIATNNTYITEILSRCVPAKTA NT seq 2808 nt NT seq  +upstreamnt  +downstreamnt atggcggtgcagccgaagcacagcctgtccatggacggtgccgccgagcaaggcttcctc agcttcatcagctccatgccggagaaacccgacaccaccttcagggtgttcgaccgcaac gacttctacacggtgcacggcagggacgccaccttcaccgccagggaggtgttcaagacc gccgccgtcatcaagcacctgggctcagggagccgcaggctggagagtgtggtgctgagc aagctgaactttgaggcctttgtgaaagacctgctgctggtgaggcagtacagagtggaa gtgtacaagaaccacagcaagagcagcaaggagcacgactggaagatcgactacaaggcc tctccgggaaacttgacccagtttgaggagattctgttcggcggtggaaccggagcggtg ggttgtgcaggagttgtagccgtgcgtttcgccaccggagccgatggacagcgcgtggtc ggggtcggctacgtggacgccgctcagaggacgatgggggtgtgcgagttcccggacaac gagatcttctccaacctcgagtcccttctggtccagatcagccccaaagagtgtctcttg gcccaaggcgacgtcagcaccgacgggaataaactacgggaggtggtacagcggggcggc atgctggtctcagacaggaagagggcggagttcagttgcaaggacatggtccaggatctg aaccggctgctgagggccaagagaggagcgactgttgccagcaacacgctgcctgagctg gacaaacaggtggcgatgtcgtgcttggctgcagtggtgcgtttccttgagctgctctcc gatgagtccaacttcaactccttcagtctgacctcactggacctgggtcagtacatgagg ctggacaacgctgccgtgagggctctgaacctcttccagggatcacctgatgacaccagt ggagctcattcattggccggactgttgaacaagtgccgtacacctcagggccagcgtctc gtcaaccagtggatcaaacaaccgctcatggacaaaaccaaaatagaggaaaggctggac ctggtggagagcttcgtttgcgactccgagctcaggcagacctgtcaggaggacctgctg cggcggtttcctgatcttcaccgtctggccaagaagttccaccgtcactctgcgacgctg caggactgcttccgggtctaccaggccgtgagccacgtgcccgccctcgtctcagccctg gagagatactcaggcagctaccaggttctgctggaggccgtgttcctctctcctctcaga gacctgcaatctgactttgttaagtaccaggagatgattgaaaccacgctggacatgaac cagatcgaccaccacgagttcctggtgaaggcgtcgttcgatccggcgctgagtgagctg agagaaaagatggacgctctggagaagagcatgcaggcggtgctgaacagtgcagccaag gagctaggtctggacgctggtaagacggtgaagctggagtcaaacgccgtgctgggtttc tacctgagagtcacctgcaaggaggagaagagtctgaggaacaacaagaagttcaccacg ctggatgttcagaagaacggagtgcgcttcaccaacagtaagctgagcgctctaaacgag gagtacaccaagaacagagaggagtatgaggaggcccagaatgccattgtcaaagagatc atcaatatcgcctcaggttacgtggatcctctccagacgctgagcgacgtgatcgctcag atggacgtggtggcgagttttgccgtggcgtccgtctcggctccggtgccgtacgtgcga ccccggttgttggaggccggctgcaggcgtatggagctgaagcaggccagacacccctgc atggagacggacgcagacaccgccttcatacccaacgacatgtccttcacccagggagag aagaacttctatatcataacaggaccaaatatggggggcaagtcgacatttatccgtcag gtgggtgtgattgctctgatggctcagattggctgctttgtgccatgcgaaaaggcggag cttagcgtgattgacagcatcctggccagggtgggagccggagacagccaggtcaaagga gtgtccaccttcatgtccgagatgctggagacggccgccatcctgcgctcggcctcggag aactcgctcatcataatcgacgagctcggcagaggcacgtccacgtacgacggcttcggt ctggcctgggccatcagcgaacacatcgcctccaaaatcagctgcttctgtctgttcgcc actcacttccacgagctgacggcgctcgcagcacagcagccgaccgtccacaacctccac gtcacggccctgacctcccacaacacgctcacgatgctgtacagagtcagagcaggtgtg tgcgatcagagttttggaatccacgttgccgagttggcgtgcttcccgccatcggtggtt gccatggcgaaggagaaggcggaagagctggaggagttccaggaacctgcaggggagaag tctgagcaggaggaagaacccgaggccaagagacgacggactgacaaacaagcgggggag aacctgatccaggacttcctggagaaggccaagtccctccctgctgccaccatgagtgaa gacgaggtgaaggcggccctcaggaggatgaagaaggagctcatcgccacaaacaacacg tatatcacagagatcctctcgcgctgtgttcctgcaaagacagcttga

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