Anoplopoma fimbria (sablefish): 129091271
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Entry
129091271 CDS
T09102
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1-like isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129091271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129091271
03032 DNA replication proteins [BR:
afb03032
]
129091271
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
129091271
Prokaryotic type
129091271
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
129091271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_N
TruB_C_2
PUA
PUA_elF2D
Pus10_C
UPF0113
LYRIC
DUF908
Motif
Other DBs
NCBI-GeneID:
129091271
NCBI-ProteinID:
XP_054454808
LinkDB
All DBs
Position
5:19031313..19042996
Genome browser
AA seq
506 aa
AA seq
DB search
MSDTEAASVKKRKKAKRVNEEDVGEIQQSGDFLIQPESKVASLDTSQWPLLLKNFDKLNI
RTAHYTPLPNGSNPLKRTIQDYVRSGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGTL
DPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAIESEHTLARALETLTGALFQRP
PLIAAVKRQLRVRTVYESKLIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLMLGVGQMQE
LRRVRSGVLGEKDHMVTMHDVLDAQWQFDHNKDETYLRRVVFPLEKLLVSHKRLVMKDSA
VNAICYGAKIMLPGVLRYEDGIEMNQDIVVITTKGEAICTAVALMTTAVISTCDHGIVAK
IKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKHGKANGSTPNDWKSQYVDYSVSKAT
AESCDTSAKRKREVTDSDGEAPTTPSTPTAEEVKKKKKKKEKRVKLEEAEPEEVVAEPEE
AEPETEVVSEKKKKKKKKLKDGDSPE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacagaagcagcttcggtgaagaagaggaaaaaggcaaagagagtcaatgaa
gaagacgttggggagatccagcagagcggagacttcctcatccaacccgagtccaaggtg
gcctctctggacacgtcacagtggcccctgttactaaagaattttgataaactgaacatc
cggacggctcattacactcctctaccgaacggcagcaaccctctgaagaggaccatccag
gattatgtcaggtcgggcttcatcaacttggacaaaccggcgaacccgtcgtctcacgag
gtcgtggcgtggattcggaggatcctgcgggtcgagaagacgggtcacagcgggacgctc
gacccaaaggtcaccggttgcctgatcgtctgtgtggatcgagccacacgactggtcaag
tcccagcagagcgcgggtaaagagtatgtggggatcgttcggctgcacaatgcgatagag
agcgagcacaccctggcccgggcgttggagacgctgacgggcgctttgttccagcgaccg
ccgctgatcgctgccgtgaaacgtcaactcagggttcggacagtctacgaaagcaaactg
atcgaatacgaccctgagaggagattaggtatcttctgggtgagctgtgaagcaggaact
tacatccggactctgtgtgtccacctgggcctgatgctcggggtaggtcagatgcaggag
ctgaggagagtccgttctggagtgctgggagagaaggaccacatggtgacgatgcacgac
gttctggatgctcagtggcagtttgaccacaacaaagacgagacgtatctgaggagagtc
gtgtttcctctggagaagctgctggtgtctcacaaacgtctggtgatgaaggacagcgcc
gtgaacgccatctgttacggagccaagatcatgctgccgggtgtcctccggtacgaagac
ggcatcgagatgaaccaggacatcgttgtcataacgaccaagggagaggccatctgcaca
gcggtcgctctgatgaccacggcggtgatctccacgtgtgatcacggcatcgtggccaag
attaagagggtcatcatggagagggacacctatcctcggaagtggggtctaggtccgaag
gccagtcagaagaagatgatgattcagaaaggactcctcgacaaacacggaaaggccaac
ggcagcacgcccaacgactggaagagtcaatacgtggactacagtgtttccaaggcgact
gcggagtcatgtgacacttcagccaagaggaagagggaggtgacggacagcgacggcgaa
gcaccaacgacgcccagcacgccgacggctgaggaggtgaagaagaagaagaagaagaag
gagaagagggtgaaactggaggaggcggagcctgaggaggtggtggcggagcctgaggag
gcggagcctgagacggaggttgtgagtgagaagaagaagaagaagaaaaagaaactaaaa
gacggcgactcgccagagtga
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