Anoplopoma fimbria (sablefish): 129091291
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Entry
129091291 CDS
T09102
Symbol
sdk2b
Name
(RefSeq) protein sidekick-2
KO
K16353
protein sidekick
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129091291 (sdk2b)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Other
129091291 (sdk2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_Rha78A_N
Tissue_fac
Ig_J_second
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
129091291
NCBI-ProteinID:
XP_054454835
LinkDB
All DBs
Position
5:complement(17090443..17167869)
Genome browser
AA seq
2166 aa
AA seq
DB search
MAEGSWPLEFKWIHNSTELTRFSLEYRYLIPSLDRSHAGFYRCIVRNRVGALLQRRTEVQ
VAFMGSFEEGERTQSVSQGEGAVIPAPRIRSFPQPQVTWFRDGRKIPPSSRIAITLDNTL
VILSTVAPDAGRYYVQAVNDKNGENKTSQPITLSVENVGGPADPIAPTIIIPPRNTSVVT
GTSEVTIECVANARPLIKLSISWRKNGVLVTSGLSDFNRRLTILSPVVSDAGFYECEAIL
RSSSVPSVSAGAYLHVLEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDALP
INPVKMPRYRVLVGGSLQVNGLLPDDTGMFQCFARNSAGEVQTNTYLAVTSIAPNITAGP
SDSTVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHIS
DAGTYTCMASNSRGIDEASADLVVWARTRITTPPQDQSVIKGTKAVMTCGVTHDPSVTVR
HVWEKEGSVINVLSIPRMRLEADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ
LPHAPENPTALLSTSEKRAIDLAWAKPFDGNSPLIRYILEVSENNAPWAILLANIEPQSV
AVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIM
IQWQPPPESHQNGILRGYTIRYRLTGLPVDYQMKNISSPDVTNLLLEDLIIWTNYEIEVA
AYNGAGLGTFSHKVTEWTLQGVPTIAPGNVQAESVNSTTIRFTWTAPNPQFINGINQGYK
LLAWEPGRDEEVAMVTVRPNFQDSVHVGYVTGLKKFTEYYTSVLCFTTPGDGPRSPPKAL
RTHEDTPGAVGHLSFTEILDTSLKVSWSEPGEKNGVLTGYRISWEEYNRTNTRVTHYLPN
VTLEYRVTGLTALTTYTIEVAGMTSKGQGQLSSSTISSGVPPELPGPPTNMAISNIGPRS
VTLQFKPGYDGKTSISRWQVEAQVGVVGENEDWVTVHQVSNEPEARSLEVPGLNPYTFYR
LRMRQVNIVGTSPPSQPSRKIQTLPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGN
AEQVGYRVQYSRAFSQGRALTHVIADRLEREFTIEDLEEWTEYEVRVQAVNGIGMGPWSQ
PVRGRTRESVPSCGPTNVSSFATTSSSILVRWFEVPEPDRNGLILGYKVVYKEKDSDSAV
HFWMVDGNATHSVQLTGLGKYVLYEIQVLAFTRIGDGRPSSPPILERTLDDVPGPPVGIL
FPEVRTTSVRLIWQSPSQPNGIILAYQITYHLNSSTSNTPTVDVLIPSARQYTVTSLKPE
SVYVFRIKAQTRKGWGEAAEALVVTTEKRARPQPTSRPMVPQKDVQARQVLLSWEPGSDG
LSPVRYYTVQLRELPENNWTVHSASVNHEATSYIVSRLKPFTSYQFRVKATNDIGDSEYS
EESEAITTLQDAPDEVPTILSVTPHTTTSVLIRWQHPSEEKINGILLGFRIRYRELLYDR
LRSYSLHTINSMSTWGELTAPYSIQNLSDSTLTQHELDKLSKHKRYEIRMSVYNAVGEGP
TSPPQEVFVGEAVPTAPPQNVVIQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRK
NETERLRTLFMPEGGVKLKNLTGYTTYMISVAPFNAAGDGPRSPPTRGRTQQAAPSAPSF
IHFSELTTTSVNVSWGEPTFPNGIIEGYRLVYEPCTPVDGVSKTVTVDVKGSGPLWLKLR
DLADGITYNFRIRAKTFIYGPEVEANITTGPGEGAPGPPGEPFITRYGSALTIHWTSGDP
GRAPITRYVIEARPSDEGLWDILIKDIPKEVTSHTFNMDILKQGVSYDFRVIGVNDYGYG
SPSLPSPSISAQKVAPFYEEWWFLVVVALVGLIFILLLVFILIIRGQSKKYAKKSESGNN
SNCNALTHGDLVSLDEGRFPALELNNRRLSVKNSFCRKNGVYTRSPPRPSPGSLHYSDED
VSTKYNDLIPAESSSLTEKPSEISDSQGSDSEYEVDPNRQKTHSFVNHYISDPTYYNSWR
RQQKGISRAQAYSYTESESGDPDHCAPPPLPPLPPLPPQLSSPSPQLSSPSPQPQQAQGQ
PQGPPQGPPQVPPQGQGSLFRPKGSRTPTPSQQISNPPSQHSTLYRPPSSLAPGSRAPIA
GFSSFV
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggggagctggcctctggagttcaaatggatccacaacagcaccgagctgacc
cgcttctctctggagtacaggtacctaatcccttcgttggaccgctcccacgccggcttc
taccgctgcatcgtgaggaatcgggtcggagcccttctgcagagacgcacagaagtacag
gtggcctttatgggcagttttgaggagggtgaacgcacccagtcagtctctcaaggagag
ggcgccgttatcccagcgcctcgcatccgcagcttcccccaaccacaggtcacctggttc
agagacggccgcaagattccacccagcagtcgcattgccatcactctggacaacacgctg
gtcattctgtctacggtggcaccggatgccgggcgctactacgtccaagcggtaaacgac
aagaacggagagaacaagaccagccagcccatcaccttgtcagtagagaatgtaggaggt
ccagcagaccccatcgccccgaccatcatcatccctccgaggaacactagcgtggttaca
ggcacctcagaggtcacgatcgagtgtgtcgccaatgccaggcctctgatcaagctgagt
atctcatggcggaagaacggtgtgctggtgaccagcggtttgagcgacttcaaccgcaga
ctgaccatcctcagtcccgtggtgagcgacgccggcttctacgagtgcgaggccatcctc
cgcagcagcagtgtgccttcagtcagcgctggggcttatctgcatgtactagaaccccca
cagtttattaaggaaccggagaagcacatcacggctgagatggagaaggtggtggacatt
ccctgccaggcacgaggagtgccccagccagacattgtgtggtacaaagatgctttgccc
atcaacccagtgaagatgcccaggtacagggtgctggtgggaggcagcctgcaggtgaac
ggcctcctgccggacgacaccgggatgttccagtgcttcgcccgaaattcggcaggagag
gttcagaccaacacatacctggctgttaccagcattgccccgaatatcacagccggaccc
tcagacagcactgtgatcgacggcatgtcagtcatcctgcactgcgagacctctggagct
ccgagaccggctatcacctggcagaaaggtgagcgtgtgttggcgagcggttcggtgcag
ctgcccaggttcaccctgctcgagtcgggcagcctgctcatctccccctcccacatctca
gatgccgggacctacacttgcatggcgagcaactccaggggcatcgacgaggcatccgct
gaccttgtggtctgggctcgcaccaggataaccacccccccacaggaccagagtgttatc
aaaggaactaaagccgttatgacctgcggagtcacacatgaccccagtgtaactgtcagg
catgtctgggaaaaagagggctccgtgatcaacgtcctgtccatcccccgcatgcgactg
gaggcggacggcaccctccacatctcccaaacctggtcaggtgacatcggcacgtatacc
tgcagagtaacctccgtgggcggcaacgactcccgcagcgcccacctccgcgtcaggcag
ctgccccatgccccagagaaccctacagccctgctgagcacgtcggaaaaaagagccatc
gacctggcctgggccaagccttttgatggcaacagtccactcatacgctacatcctggag
gtttctgagaacaacgctccctgggccatcctgctggccaatattgagccacagtccgtg
gcggtgacggtcaatggcctgatcccggcgcgctcctatcagttccgcctctgtgccgtt
aatgatgtggggaaggggcagttcagcaaggagaccgaccgtgtctctctcccagaggag
cccccgagtgctcctccacaaaatgtcatcgctagcggtcggaccaaccagtccatcatg
atccagtggcagcctccgccagaaagccaccagaacggcatactcaggggctacaccatc
cggtaccgtctgactgggcttcctgtggactaccagatgaagaacatttccagccccgac
gtgaccaacctgctgctggaggacctcatcatctggactaactatgagatcgaggtggct
gcctacaacggggcgggtttgggcactttcagccacaaagtcactgagtggactctgcag
ggagttcccaccatcgctcccggcaacgtgcaggccgagtcggtcaactcgacaacaatc
cgttttacgtggactgccccgaaccctcagttcatcaacggcatcaaccagggctacaag
ttgctggcctgggagcctggcagagacgaagaagttgccatggtaacggtgcgaccgaac
ttccaggacagcgtccatgtgggatatgtgacaggtctgaagaagttcacagagtattac
acctctgtgctgtgtttcaccacgcccggagacggcccccgcagcccgcccaaggccttg
aggacacacgaggacacccccggtgctgtaggtcacctgagtttcactgaaatcctggac
acctcgctcaaagtcagctggagtgagcccggcgagaagaatggagttctcacaggttac
cgcatttcgtgggaggagtacaaccgaacgaacaccagagtcacccactacctgccaaac
gtcaccttagagtaccgggtcactggactcactgctctcaccacctacaccattgaagtg
gcaggaatgacctccaagggacagggccagctgtcctcctccaccatctcctccggcgtc
ccaccagaacttcctggcccccctaccaacatggcaatttccaacatcggcccacgctct
gtcaccctgcagttcaaaccgggctacgatggcaaaacttccatttcccgctggcaggtg
gaggctcaggtgggtgtggtgggagagaatgaggactgggtgacggtccaccaggtgtcc
aacgagcccgaggcccgatccttggaggttccaggtctcaacccatacaccttctacagg
ctccgaatgcgtcaggtgaacattgtgggcaccagtcctcccagtcagccctccaggaag
atccagactctgccggctcctcctgacatggcccccgccaacgtcaccctacgcaccgcc
agcgagaccagcctctggttacgatggatgcctctgcctgaatgggaatacaacgggaac
gcggagcaggtgggctacagggttcagtactcccgcgccttctcgcagggccgggcgctg
acccacgtcatcgcagaccgtctggagagagagttcaccatcgaagacctggaggagtgg
acagagtacgaggtcagggtccaggcggtcaacggcatcgggatggggccctggagccag
ccggtcagaggcaggacgagggagtcggtcccctcctgtggacccaccaacgtgtcctcc
ttcgccaccacctccagcagcatcctggtgcgctggtttgaagttcctgagccagacaga
aatggtctaattctgggctacaaggtggtgtacaaagagaaggactcagacagtgcagtt
catttctggatggtggatggaaacgccacccacagtgtccagctgaccggtctgggaaag
tatgtgctctatgagatccaggtcctggctttcacgcggattggagatggacggcccagt
tctccacccatactggagaggactttggatgatgttccaggacctccagtggggatcctg
ttccccgaagtacggaccacatcagtccggcttatttggcagtccccctcgcagcccaat
ggcattatacttgcctaccagatcacgtaccacctcaactcctccacgagcaacaccccc
acggtggacgtgctgatccccagcgctcgccagtacacggtgaccagcctcaagccggag
tccgtctacgtgttccgcatcaaagcgcagacgaggaaaggttggggcgaggccgctgag
gctctggtggtcaccacagagaaaagagctcgtccacagcccaccagccgacccatggtt
cctcagaaagatgtccaggcccgccaggttttgctgtcgtgggagcccggcagcgacggc
ctgtctcctgtgcgttactacacggtgcagctcagagagctccctgagaacaactggaca
gtccactctgcctccgtcaaccacgaggccacctcctacatagtgtcaaggctgaagccc
ttcacatcctatcagttcagagtaaaagccaccaatgacatcggggacagcgagtacagc
gaggagagcgaagccatcacgacactacaggacgcgcctgacgaagtacccacgatcctc
tctgtcacaccgcacacaacaacgtccgtgctgatccgctggcagcacccctctgaggag
aagataaatggaatcttattgggctttcggattcgatatcgtgagctgctgtacgaccgt
ctccgcagttactctcttcacaccatcaacagtatgtccacctggggtgagctcactgca
ccctacagcatccagaacctgagtgattccactctgacccagcatgagttggacaagcta
agtaaacataaacgctatgagatacgcatgagtgtgtacaacgctgtgggggaggggcca
accagtccgccacaggaggtgtttgtgggagaagcagtgcctacagccccaccccagaat
gtggtcattcagtccgcaacagccacccagctggacgtgacatgggaccctcctcctgtg
gatgcacagaatggagacatccagggctacaaggtctacttctgggaattccagcgtaag
aatgagacggagcggctgcggactctgttcatgccggaaggaggggtgaagctgaagaac
ctgaccggttacaccacctatatgatcagtgtagcgcccttcaatgcagcgggggacgga
cctcgcagcccaccgacaaggggacgcactcagcaagcggctcccagtgctccaagcttc
atccacttcagtgagctgaccaccacctcggtcaacgtgtcctggggcgagcccaccttc
cccaatggcataattgagggctaccgtctggtctacgagccctgcacaccggtagatggc
gtcagtaagacagtgacggtggatgtgaaggggagcggcccgctctggttgaagctcaga
gacctggccgacggcatcacatacaacttccgcatccgggccaagactttcatctacggg
cccgaagtggaggccaacatcaccaccggcccgggagaaggagccccaggaccccccgga
gaaccctttatcacacgctatggttcggccctgaccatccactggaccagcggggaccca
ggacgagctcccattacgcgctacgtgatcgaggccagaccttcagatgagggattgtgg
gatatcctaatcaaggacatccccaaggaagtaacatcgcacacgttcaacatggacatc
ctgaagcagggcgtcagttatgacttcagggtaattggagtgaacgactacggctacggc
tcccccagtctaccttctccttccatatctgcccaaaaagtagcgcccttctacgaggag
tggtggttcctggttgtggtggctctggtgggcctcatcttcatcctgctgctggtcttc
atcctcattatcaggggacagagcaagaagtacgccaagaagtctgaatcaggcaacaac
tccaactgcaacgctctgacccacggagacctggtcagcctggacgaaggtcgattcccc
gctctggagctcaacaaccgaaggctgtcggtgaagaactcattctgccggaagaacggc
gtctacaccaggtctcctcctaggcccagtccgggcagtcttcactattcagacgaggac
gtcagcacaaagtacaacgacctgatccctgcagagagcagcagtctgactgaaaaaccc
tccgagatctcagactcacagggcagcgacagtgagtacgaggtggaccccaaccgccag
aagacccactccttcgtcaaccactacataagcgaccccacctactacaactcctggcgg
cgccaacagaaaggcatatcccgggcacaggcctacagctacaccgagtccgagtcgggc
gacccggatcactgcgccccgccgccactgcctcctctacctccactgccgccccagctc
agctcgccaagcccccagctcagttcgcccagcccccagcctcagcaggcccagggccag
cctcagggcccgcctcagggtccacctcaggtcccgccccagggccaaggcagcctgttt
aggcccaaaggtagccggactccgaccccctcccaacagatctccaacccccccagccag
cacagcaccctctacaggccccccagcagcctagctcctggatcgcgggccccaatcgct
ggcttctcctcctttgtgtga
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integrated database retrieval system
