Anoplopoma fimbria (sablefish): 129091303
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Entry
129091303 CDS
T09102
Symbol
rnf169
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129091303 (rnf169)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129091303 (rnf169)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129091303 (rnf169)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129091303 (rnf169)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
129091303 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129091303
NCBI-ProteinID:
XP_054454855
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Position
1:867962..876027
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AA seq
599 aa
AA seq
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MAAAGSAERPATPASSDRPGPAAGCGARAAGGAAGGGAAGGAAGGAAGGGAAGGAGGGAA
AEEEQPEEQPEEQPEEQPEEQPEEQRSVHRAQTRRSHPERSSRAARRDVHRGGECFVSPA
LIPKCCDVVSGPPSKQKLASEDRDEVKRRNCKDESVRHDEEPGVLSDSENEEPFSRRIRN
ISAFIRKTKNSAALSSGAQRSQSCSEPVEDRGRKTKVVTQPALMDRVGISHSFTAGILLS
SENSRSVSAPITADRRLAWRAVVSSTXPWAPPPPRPERSISPESNDSISEELNHFKPIVC
SPCTPPKRLPDGRLLEPTIVKSTPRNLTRGLQKNTSYEASPAVLQKWRQIELDRQSLKVN
SKATLTSPVNELHNRPVGGDARTRQSPAGRGGDGVRNANKRRLLFEPPAGDTDCFQKQSV
RIRVPAIRYSSESTFRGNSDFEPAVGAPESGSGGALFSRKQSFSPHTKNSGFQSCKLVPK
DSQSPRKESDSGLHNQSTSRRGKKREQKTKHLDSERDSDRKRSRSASQEAFDERYVRQIQ
QERQDRAIALKLQRQFDLENQTASRRRSPDKYFLRSWMSNQNHRRRRGLRRSRRINKKH
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcagggtccgcagaacggcccgctactccggccagcagcgaccggcccggg
cccgcagcggggtgcggggcccgggccgccggaggagcagccggaggaggagcagccgga
ggagcagccggaggagcagcaggaggaggagcagccggaggagcaggcggaggagcagca
gcggaggaggagcagccggaggagcagccggaggagcagccggaggagcagccggaggag
cagccggaggagcagcgcagcgtccaccgggcacagacacggaggagccacccggagagg
agcagcagggcggccaggagggacgttcaccggggaggagagtgcttcgtctctccggct
ctcatcccaaaatgttgtgacgttgtatcaggaccacccagcaaacagaagctggcgtct
gaggacagagacgaggtgaagaggaggaactgtaaagacgagtcagtccgacatgacgaa
gagccaggagttctgtcggactcggagaacgaggagcctttcagcaggaggatcagaaac
atctcggccttcatcaggaaaaccaaaaactctgcggccctctcaagtggtgctcagagg
agtcagagctgcagcgagccggtggaggaccgaggacggaagacgaaggtcgtcacacag
ccggccctcatggacagagtgggcatcagtcacagcttcacagcaggaatccttctctcg
tcggagaacagccgctccgtctcggctcccatcaccgccgaccgccgcctcgcctggaga
gctgtcgtctcgtcgactnncccatgggcgccgcccccgccccggcccgagcgctccatc
agccccgagagcaatgacagcatctctgaggagctcaaccacttcaagcccatcgtctgc
tcgccgtgcacgccgcccaaacggctgccggacggccgtctgctggagccgaccatcgtg
aagtccacacccaggaacctgacccgcggcctgcagaagaacaccagctacgaggccagt
cccgccgtcctgcagaagtggaggcagatcgagctggaccgccagagcctcaaggtgaac
tccaaggcgacgctgacgagccccgtcaatgagctccacaacagaccggtggggggggac
gccaggacccgtcagtccccggcgggacgcggcggagacggagtcaggaacgccaacaag
aggaggctgctgttcgaacctccagccggagacacggactgcttccagaaacagtctgtg
aggatccgggtcccggccatccgctacagcagcgagtccactttcagaggaaattcagac
tttgagccggcggtcggcgctcctgaatccggcagcggtggagcgctctttagccgaaaa
cagtcgttctcgccgcacactaagaactccggttttcagtcctgtaagttagtgccaaag
gactcacagagtccgaggaaggagtccgacagtggcctccacaaccagtctacctcaagg
aggggcaagaagcgggaacagaagaccaaacacctggactcggagcgggactcggaccgg
aagaggagccggtcggccagccaggaggccttcgacgagcggtacgtccgtcagatccag
caggagcgtcaggaccgagccatcgccctgaagctgcagagacagttcgacctggagaac
cagaccgccagccgccggaggagccccgacaagtacttcctgcggtcctggatgtccaac
cagaaccaccgcaggaggcgtggcctgaggagatcccgacgaatcaacaagaagcactag
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