Anoplopoma fimbria (sablefish): 129091422
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Entry
129091422 CDS
T09102
Name
(RefSeq) PDZ domain-containing protein 7-like
KO
K21882
PDZ domain-containing protein 7
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129091422
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129091422
Cilium and associated proteins [BR:
afb03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129091422
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
129091422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129091422
NCBI-ProteinID:
XP_054455003
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All DBs
Position
5:16207224..16217978
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AA seq
893 aa
AA seq
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MAHSSDPSRREKTPGTQGSHTATRNLLRKKEQRRRGIRSSSPMGRVILINSPVDGGDDSE
DLHTITVDKSVDGKLGFSVRGGSEHGLSIFVSKVEDNSTAEESGLLVGDKLVEVNGVSLE
SITMSSAVKVLTGNNRLRMVVRRVGKVPGIRYSKEKTTWVDLIHRRMVVEESGRTPSDAS
SGSALQRIVHLYTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAEQNGIKMGDQILAAN
GVNFEDISHSNAVEVLKSHTHVMLTIKEAGRYPAYKEMVAEYRWLNKLANGNQKSSSQGS
ESNSSASSLSSGTPVSSLSGLSQVMFPPSMPFGSDMVDVCISTEDQRFESERTETAMQTD
LPSQRTAAETTRSLGRTTLLRDTVIRGEEGEGGGRQESPKTAVLLALSRPSRPISRSQSQ
VTVAEIKQKKEKKQKGKHPEEKSTLQRSKTFVNLLFKGGRKRDTSKGRSKSPSTHKAGKG
GRQAGAMPNSEMLGAVEDMARRLLTEEEVAAVMKTCRKYVAERSVENLIRHLLAVLDRPE
KLLLLREVRMLLPPPDLSAFNNMVTPVEVEAYDILKYRSIQTPPLRSPTSGRAPKRRLIT
PIPDFRGGFELHNAEEVEKEGHLLDELERLSVSGPRGSMERPRPSRSFTPLLDIPVDGYD
TESSDLRPPSAGAMLPNWLLARSQDSHRPPLRTDIGTIRSIHFDEVSLHSTSDTTSERGR
STFRNGHSKGQKEKSGERSKDTVFTLQSAARRSRPALSQVFRSSPERRVGTEQMNGHQAA
SENGLNGSEPEQEYELKTVSISKTKQSLGISISGGMESKVQPVVKIEKIFPGGAASTCEV
LKAGFELVSVDGISLQGVTHQHAVDIIRKAFSNKAKDPMVFAVKVPKNILKGD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcgtcagacccgtcccgcagggagaagacccccgggacccaggggtcacac
acggctacacgcaacctcttacggaagaaggagcagcggcggcgtggaatccgatcctcc
tcgcccatgggccgggtcatcctcatcaactcccctgtggatggtggcgatgacagcgag
gacctccatacgatcacagtggacaagagtgtggacggcaagctgggcttcagcgtgcgt
ggaggctccgagcacggcctcagcatcttcgtcagcaaggtggaggacaacagcacggcg
gaggagtccggcctgctcgtaggtgacaaactggtggaggtgaacggcgtcagcctggag
agcatcacgatgagcagcgccgtgaaggtcctgacgggcaacaacaggctgaggatggtg
gtgaggcgggtcggcaaagtccccggcatccgctactccaaggagaagactacctgggtg
gatttgattcacaggcgtatggtggtggaggagagcggacggactccttcggacgccagc
tcagggagcgccctccagaggatcgtccacctttacaccacctccgacgactactgcctg
ggcttcaacatccggggcgggaaggagtttggtctgggcatctatgtctccaaactggat
cctggtggtctggctgagcagaatgggataaagatgggggaccagatcctggctgccaac
ggcgtgaactttgaggacatcagccacagtaacgctgtggaggtgctgaagagccacaca
cacgtcatgctgaccatcaaggaagcaggacgataccctgcttataaagagatggtggcc
gaatacaggtggctcaataagctcgccaatggcaatcagaaatcttcctcccagggttca
gaatccaactcctccgcctcctccttgtcatccgggactccggtgagctctctgagcggc
ctgtcacaggtcatgttccctcccagcatgccatttggttcagacatggtggacgtctgc
atctctacggaggaccaaaggttcgagtcggagcgaaccgagaccgccatgcagacggac
cttccctctcagaggacggctgcagaaaccactcgcagcctgggccgaaccactctgctc
agagacacggtgatccgcggggaggagggggagggcggcgggagacaagagtcccccaag
acggccgtgctgctggccctcagccgaccgagccgaccaatcagcaggtcccagagccaa
gtcaccgtggcagagatcaagcagaagaaagagaagaagcagaaagggaagcacccagag
gagaagagcaccctgcagcgctcaaagaccttcgtcaacctgctgttcaaggggggacgc
aagagagacacttccaagggtcgctccaagtccccgtcaactcacaaggctggcaaaggc
ggacgacaggccggtgcgatgccaaactcagagatgctcggcgcggtggaggacatggcc
cgcaggctgctgactgaggaggaggtggctgctgtgatgaagacgtgccgaaagtacgtg
gcagagcggtcagtggagaacttgatacgccacctgctggccgtgctggacagacctgag
aagctgctgctgctgagggaagtccggatgctgcttcctcctcctgacctgagtgcattc
aataacatggtgaccccggtcgaagtcgaggcctacgacatcctcaagtatcgttcaatc
caaactcctcctcttcgctctccaacatccgggcgagcaccaaaacggcgcctcatcact
ccaatcccggatttcagaggaggctttgagctccacaatgccgaggaggtggagaaggag
ggccacctgctggatgagctggagaggctcagtgtgtcggggccccgggggtccatggag
aggccccgtccctccaggtccttcaccccgctgctggacatacccgtggacggatacgac
acagagtccagcgacctccgacccccctctgccggcgccatgctccccaactggctgctg
gcccgaagccaagactcccaccgtcctcctctcagaacggacatcggcacgattcgctcc
atccacttcgacgaggtttcgctgcactcgacctccgacacgacctcagagagagggagg
tcaacgtttagaaacggccactccaaaggccaaaaggagaaaagtggagagaggagcaaa
gacactgtgttcacgctgcagagcgccgctcgcaggagtcggcccgcgttgtctcaggtg
ttcagatcgagtccagagcggcgagtcgggacggagcagatgaacggacaccaggcggcc
tctgaaaacggactcaacggctccgagcctgaacaggagtacgagctcaaaaccgtcagc
atctccaagaccaaacagtcactgggcatcagtatatctggtgggatggagtcgaaggtt
cagccggtggtgaagatcgagaagatcttccctggaggagcggcctccacctgtgaagtg
ctcaaggctggattcgagttggtgtccgtggacggaatctcgttgcaaggcgtgacccat
cagcacgccgtcgacatcatccgaaaagccttcagcaacaaggccaaagaccccatggtg
ttcgctgtcaaggtccccaaaaacattttgaaaggagactga
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