Anoplopoma fimbria (sablefish): 129091428
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Entry
129091428 CDS
T09102
Symbol
tap2t
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
afb04145
Phagosome
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129091428 (tap2t)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129091428 (tap2t)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129091428 (tap2t)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129091428 (tap2t)
Enzymes [BR:
afb01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
129091428 (tap2t)
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
129091428 (tap2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
AAA_30
SMC_N
RsgA_GTPase
AAA_15
AAA_16
DUF5313
AAA_29
NTPase_1
Zeta_toxin
AAA_5
nSTAND1
PBECR2
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
129091428
NCBI-ProteinID:
XP_054455013
LinkDB
All DBs
Position
5:complement(9445932..9460040)
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AA seq
712 aa
AA seq
DB search
MGELVARGLFILLFDTVLCLGLWAGLVQLQCSSCGGLPGVWAFGAVKWASLHVFTSKLTD
GQPEGVLRRLVALLCLLSPVFETGRFLMAPPSEPYTGLTPDLGMLLLLSMSALLACVVWE
KCLCGDSKLTKDNIKLDARRLLVRLVKYYKPDTFYLIAAFGFLILGVICDAYIPLYQGNV
IDMLRGQVLHTSFFYPIGQLALVSLGSSLFSGLRGGIFMCTLARLNKRLKGLLFNRLLQQ
EVHFFEENNPGRLSSRLHSDVDRMGRTVALNANALVRSTVKSCLMLKLMLGLSGELTVLT
CIEMPLLALLQNRYINLSKDLKDQIQECHAQNKELAHQTISGIRTVRSFQAEKDELRRYN
EALDRMCSVKTRLGIYSSIFCLLRRLVSLGIKILMLVKAHTLILSGQLSVGSLVSFLLYQ
KPMSNNLREIMYCYGETMSTVGIISKVFSYLDRTSKCKKAGDLAPKKLEGRIVFQNVTFT
YPSAEDKVALKSVSMELQPGKMTALVGPSGSGKTSCVSLLKRLYEPQEGQILLDGEPLHR
YKHEYFHQKMALVSQNPVLFSGSLRYNIAYGLKDCSIEQVKEAAKKANAEDFISEMENEY
DTDVGECGGSLSDGQKQCIAIIRALVREPQVIILDEATSKLDVEMQHAVLREVLACGRTV
LVVAHQLKTVEEADHIVFIEKGVVVEEGTHQELMAKRGRYHRLKEELFSQVS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgggggaattggtagctcgtggattattcatccttcttttcgacacggtgctgtgtttg
ggactttgggccggactcgtgcagctgcagtgctccagttgcggcgggctgccaggtgtt
tgggccttcggggccgtgaagtgggcgagcctccatgttttcacctctaaactgactgat
ggacagccggagggtgttctccgaaggctggtggcgctcctctgccttctgtctcctgtg
tttgaaaccggacgtttcctcatggcgcctccatcggagccttacaccgggctgactcct
gacctcggcatgctgctcctgctttccatgtcggcattgctggcctgcgtggtttgggaa
aagtgcctctgtggtgattcaaaactgacaaaggataacattaaactggatgccaggcgg
ctgcttgtcagattggtgaaatactacaaaccggataccttttacctgattgcagctttc
ggtttcctcattttaggtgtaatctgtgatgcatatatcccattgtatcaggggaatgtc
atcgatatgctcagaggtcaagtacttcacaccagcttcttttatccaattggacagctg
gcacttgtctctcttggaagctcactgttctctggcttaagaggaggaatatttatgtgc
acgctggccagactgaacaagagactgaagggtctgctgtttaaccgcctgctgcagcag
gaagtgcacttctttgaggagaacaaccctggccgtctgtcctcccgcctgcactccgat
gtggacaggatgggccgcacagttgcgctgaatgccaacgcgctggttcgcagcaccgtc
aagagctgcctcatgctcaagttgatgttaggcctgtccggtgagctcactgtgctcacc
tgcatagagatgccactcttggccctcctgcagaatagatacatcaacttgtccaaggat
ctgaaggatcagatccaggaatgccacgctcagaacaaagagctggctcaccagacgatc
agcgggattcgcacggtccgcagcttccaggcggagaaggatgaactgaggaggtacaac
gaggctctggaccgcatgtgctccgtgaagacacgtttgggaatctacagctccatcttc
tgcttattacggaggctggtgagtctggggataaagatcctcatgctggtaaaggcccac
actctcatcttgtcgggtcaactcagcgtcggtagtctcgtctccttcctcttgtaccag
aagcccatgtcgaacaatttaagggagattatgtattgctatggagagacaatgtcgacc
gttggaatcatctccaaagtgttcagttatcttgacagaacatcaaagtgtaagaaagcg
ggagatttagcccctaagaagctggagggaagaatcgttttccaaaacgtcaccttcacg
tatccctcagcagaagacaaagtagctctgaagtctgtttctatggagcttcagccaggg
aagatgacggccctggtgggtccctccggcagtgggaagacttcctgtgtcagcctcctg
aagaggctgtacgagccgcaagagggacagatcctgctggacggagaaccgctgcaccgt
tacaaacacgagtacttccatcagaagatggccctggtatcccagaatcctgtgctgttt
tctggttcactgagatacaacatcgcgtacggcctgaaggactgcagcatcgagcaggtg
aaggaagctgcaaagaaggccaacgcagaagacttcatctctgaaatggagaatgaatac
gacacagatgtaggcgaatgtggcggctcgctttcagatggacagaagcagtgcatcgcc
atcattagagctctggttcgagagccgcaggtcatcatactggatgaggccaccagcaaa
ctggatgttgaaatgcagcatgctgtgctgcgggaggttctggcctgcggtcggaccgtc
ctggtggtggctcatcagctgaagactgtggaggaggcggatcacatcgtcttcatagag
aagggagtcgtcgtggaggaggggacgcaccaagaactcatggccaagagggggcgctac
caccgtttgaaggaagaactgttctctcaagtcagctga
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