Anoplopoma fimbria (sablefish): 129091470
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Entry
129091470 CDS
T09102
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129091470
03015 mRNA surveillance pathway
129091470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129091470
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129091470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
RRM_5
RAP1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129091470
NCBI-ProteinID:
XP_054455081
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All DBs
Position
5:complement(2806840..2810802)
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AA seq
272 aa
AA seq
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MAPSPTKRKEDDKSKQRGKEKSGATKEGGDKDRGRDKNRTRRSASSGSSSSSSSSSSGSS
SGSSSGSSSSASSHSGSSSSRSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRDRRR
RSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRVHPHLSKGYAYVEFETH
EEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRMRRR
SRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatccccaacaaagaggaaggaggacgacaagagcaagcagcgaggtaaagag
aagtcaggagccacgaaggaaggaggtgacaaagaccggggccgagacaagaaccgcacg
cggcgcagtgcttccagtgggagcagcagttccagctccagcagcagctcaggctccagc
tcaggatcctccagtggctccagttcctctgcctccagccactcaggctcatccagttcc
cgctcctcttcctcctcctcatcctcctcaccgagccccagccgccagcgccacaacaac
agacgacgctcccgctcaaagtcaaaatcagcgaagaaggatgacagggaccgacggcgt
aggagccccacacccaaacccaccaaggtctacctgggccggctgaccaggaatgttatc
aaggaacacatccaggagattttctccacttacggcaagatcaagatgattgacatgccc
atgaaccgcgtccacccccacctgtccaaaggctacgcctacgtggagtttgagacccac
gaggaggcagagaaggccctgaaacacatggacggaggtcagattgacggtcaggagatc
acagtcacagctgtgctgactcccacagtgcgcccgcctccccgcaggctgtcgcctccc
cgcaggatgccccctccacccccaatgtggcgacgcactccacctcgaatgaggaggagg
tctcggtctccacggcgacgctctccagtgcgtcgcaggtctcgttcgccgggccgccgc
aggcaccgctcacgatccagttccaactcctcccgttag
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