Anoplopoma fimbria (sablefish): 129091680
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Entry
129091680 CDS
T09102
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129091680 (rhbdl1)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
129091680 (rhbdl1)
Peptidases and inhibitors [BR:
afb01002
]
Serine peptidases
Family S54: Rhomboid family
129091680 (rhbdl1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
129091680
NCBI-ProteinID:
XP_054455350
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Position
5:complement(6361002..6395158)
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AA seq
373 aa
AA seq
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MDRSSLFQLIQEQQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLLALVQSNEEGQVC
YQELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGLYKRFVRYVAYEILPCETDRR
WYFHQNRLCPPPVFIAIVTIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYHPGHRAQV
WRFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVLAGSLTVSITDMR
APVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPL
PSSGPQPSFMAHLSGAIVGISMGLLILRSYEESLQKQCSWWVIVFSFITFLLFAIFWNIF
AYELLGVQIPPPP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctccctgtttcagctcatacaagagcagcagctggacccagacaacacc
ggtttcatcgcagtggagaacttcaccagcttggtggagcaccatgagctgcagctggac
ccgtccaaactggacatgctgttagccctggtccagagcaatgaagagggacaggtgtgc
taccaggagctcatcgagctgatgagcagtaagcgctccagcagtttccgacgggccatt
gctaatggccgccgcacgctgcagagggagatcctgctggatgagacggggctgggtctg
tacaaacgctttgttcgctatgtggcttatgagatcctgccctgcgagacggaccgacgc
tggtacttccaccagaaccgcctgtgtcccccacctgtcttcatcgccatcgtcaccatc
gtacagattatcgtgttcatgtgctatggcatcatgctaaacaagtgggtactgcagacc
tatcagcccgacttcatgaagagccccctagtctaccaccccggccaccgtgcacaagtg
tggcgcttcttcagctacatgttcatgcacgttggtttggagcagctggggttcaatgct
ttactgcagctgatgattggcgttcctttggagatggtccatggcatcttacgaataagt
ctgctttacatggcaggagtgctggcaggctcgttgacagtgtccatcaccgacatgcgt
gctccagtggtggggggctctggaggggtctacgctctgtgctcagcccatctagccaac
gtcgtcatgaactgggccgggatgcgttgtccctacaagctgctccgcatgatcctggcg
ctagtttgcatgagttcagaggtgggtcgtgcagtatggcttcgcttctcaccaccgctg
ccctcctcggggccccagcccagcttcatggcacacctatcgggggccattgtcggtatc
agcatggggcttttgattctgcgcagctacgaggagagtctgcagaaacagtgctcctgg
tgggtcatcgtcttctccttcatcacctttctcctctttgccattttctggaacatcttt
gcatatgagctgctgggggtgcagataccacctcctccctga
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