Anoplopoma fimbria (sablefish): 129091718
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Entry
129091718 CDS
T09102
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129091718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129091718
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
129091718
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
129091718
NCBI-ProteinID:
XP_054455390
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Position
5:complement(14222059..14295247)
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AA seq
1215 aa
AA seq
DB search
MNVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNGKKK
EVHRITTGDGIKRTDKDDPAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGAL
VIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDF
FTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWL
TAAGFIHLVENSGDPWENFKNSQALSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFF
ILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKD
RDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILAN
KYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLA
ELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVG
MSFPVICELCYVKLKLLLIAIEYKSDQRECSTLINPGNHVKMQEGTLGFFIASDAKEVKR
ALFYCKACHDDITDPKRIKKCGCKKSKKFAYKKMKLACCFDCGRSERDCSCMPVNVRCNM
DSPRRDIPLSAVSVNDCSATLRAFEEDQQLALSPKKKQRNGGMRNSPNSSPKIVRHDPLL
IPGNDQIESMDENVKKYDSTGMFHWCPSKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKS
ALIGLRNFVMPLRASNFHYHELKHIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADL
RAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMLFDDSIGVLQANSQGFTPP
GMDRSSPENSPVHGLVRQTSVTTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPF
ACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTL
ANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNSQSQCT
KRYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIQTT
NRTNRAKSRDSRDKQNGIRGSKLGQWDKRFTGEPQNTHLRTIQIKPVNTLAINQVRQHKS
TSSLIPPIREVEDEC
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcatcatcccgttttccccagatgtgccctgtgacagcaacggccagcggatg
tggtgggctttcctcgcctcctccatggtcactttctttgggggtctcttcataatcctc
ctgtggagaactctcaaatacctgtggactgtgtgctgccactgtaacggcaaaaagaag
gaggtccatcggatcacgacaggcgatggcatcaagcgcaccgacaaggacgacccggcg
gccagcgaggtgggctggatgacctcggtcaaagactgggctggagtcatgatatccgct
cagacactgacaggaagagtgctggtggtgctcgtatttgctctcagcattggagccctt
gttatatactttatagattcttctgatcctatcgagtcctgtcagaacttctacaaagac
ttcacgttgcagatcgacatggcgttcaacgtgttcttcttgctgtacttcggcctccgg
ttcattgctgccaatgacaagctgtggttctggttggaggtgaactcggtggtggacttc
ttcacggttcctccggtgtttgtgtcggtgtacctgaacaggagctggctcggcttgagg
tttttaagggccttaaggttgatacagttctcagaaattttacaatttttgaatatacta
aagacaagcaactcaataaagctggtgaacctgtgttcgatcttcataagcacatggcta
actgcggcaggattcattcatttggtggaaaactcaggggatccttgggaaaacttcaaa
aattcccaggcgctttcctactgggaatgtgtctacttactcatggttactatgtccact
gttggctacggagacgtttatgcgaaaaccaccctgggtcgcctgtttatggtcttcttc
atccttggtggtttggccatgtttgcgagctacgtccctgaaatcatagagttaatagga
aaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcacatcgtggtc
tgtggtcatattacacttgagagtgtgtccaactttctaaaagacttcctacacaaggac
agggatgatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagctg
gaagccttgttcaagcgccacttcactcaagtggagttttaccaaggatccgtcctgaac
ccacacgacctggccagagttaagatcgaatcagctgatgcttgtttgatcttagccaac
aaatactgtgctgaccctgatgctgaggatgcatccaacatcatgagagtaatatctatc
aagaactaccatccaaagatcagaattatcactcagatgttgcagtaccacaataaggcc
caccttttgaacatcccgagctggaactggaaggagggagatgacgctatttgccttgcg
gagctaaagcttggcttcatcgcgcagagctgcctggctcagggcctctccaccatgctg
gccaaccttttctccatgaggtccttcatcaagattgaggaggacacatggcagaagtat
tacctagaaggagtggccaatgagatgtatactgagtacctatcgagtgcctttgtgggc
atgtccttccctgtcatttgcgaactctgctacgtgaagctaaagctgctactgatagct
atagagtacaagtctgatcaaagggaatgcagcaccttgattaaccctggaaaccacgtg
aaaatgcaggaggggacattgggcttcttcattgcaagtgacgctaaagaagtgaagagg
gcgctgttttactgtaaagcctgccacgatgacattactgatcccaaaaggattaagaaa
tgtggatgcaagaaatccaagaagttcgcctacaagaaaatgaaactggcatgttgtttt
gattgcggccgctcagagcgggactgctcttgcatgccagttaatgtgcgttgtaacatg
gactctcctcgacgcgacatcccactctctgctgtctctgttaatgattgctcagccact
ttacgtgcctttgaagaggaccaacagttggcgttatcgcccaaaaaaaagcaacgcaac
ggaggcatgagaaattctccaaactcctcacccaagattgtgagacatgacccgctcctc
atcccgggaaacgaccagattgagagcatggacgagaacgtaaagaaatacgactccacg
gggatgtttcactggtgcccgtccaaagacatcgagaaggtcatcttgacccggagtgag
gcagccatgactgttctgagtggtcacgtggtcgtgtgcatatttggagatgtgaaatct
gcgttgattggtctccggaactttgtcatgcctctgagagcgagcaactttcactaccat
gagctgaagcacatcgtgtttgttggctcccttgagtatctgaaacgggagtgggagacc
cttcacaattttccaaaggtctccattttacctggcacgccgttgagtcgggcagatctg
agggctgtcaacatcaacctctgcgacatgtgtgtcattctgtcagccaatcagaacaat
attgatgatgcatcactgcaggacaaagaatgcatcttggcgtcactcaacatcaaatcc
atgctgtttgatgacagcatcggggtcttgcaggctaattcccaaggcttcacaccacca
ggaatggatagatcctctcctgaaaacagcccagtccatggattagtgaggcagacttct
gtcacaaccggagcaaatattcccatcataacagaactagtaaatgactccaatgttcag
ttcctggaccaagatgatgatgacgaccctgatacagagttatacctcactcagcctttt
gcctgtggaacagccttcgccgtcagtgtgctggattcattaatgagtgctacatacttc
aatgataatatcctcaccttgatccggacgctggtaacaggcggggcgaccccggagctg
gaggggctgctggcagaggagaatgcattacggggcggctacagcacgccacagacgttg
gcgaacagggacaggtgtcgtgtggcacagctggccttgtacgacgggcccttcgccgac
ctcggggatggcggttgttatggtgacctgttttgtaaagccctgaaaacatacaacatg
ttgtgttttggcatctatcggttacgggacgcacatctaaactcccaaagccaatgtacc
aaacggtatgtcatcaccaatccaccatatgcgtttgagctggtgccctcagacctgata
ttctgcctgatgcagtttgaccacaacgctggccagtctcgaaccagtctctcccactct
tcccattcgtcccattcctccagcaaaaagagctcctccgtccactccatccaaaccacc
aaccgcaccaaccgcgccaaaagcagggactcacgagacaaacaaaatggcattagagga
tcaaaactgggacaatgggacaaaaggtttacaggtgagccacagaatacccacttgagg
accatacagatcaagcctgtgaatacgctcgccatcaaccaagtccgtcagcataaatcc
acaagcagcttgattccacccatcagagaagtagaagatgagtgctga
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