Anoplopoma fimbria (sablefish): 129091720
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Entry
129091720 CDS
T09102
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129091720
Cell adhesion molecules [BR:
afb04515
]
Cadherins
Cadherin related
129091720
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
129091720
NCBI-ProteinID:
XP_054455392
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Position
5:11874066..11886173
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AA seq
849 aa
AA seq
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MKKEKKTHALLFVLLLHFTLARQSDYAPYFYDNGPSSTHGNMALFSISEDTPVGTQIYIL
NGTDPEGDPVRYGLTFEMGSKEYLRVDSKSGRVTLIQELDREKQDEISVMVSITDGRNKV
VETVRVFVTDANDEPPEFQNLPFIIDIPEDTAPGSSIYKVQAADRDLGSGGSVSYYLQTS
PFAKFTIDGNSGILRVKPGETLDYETTPTHFVTVVAKDGGGRFKGKHQVLTSTATMTINV
LDAQDMSPSFIGTPYFGYVYEVSVPGSEIFTVYAKDGDQGNPNAIYYSIMNGSDGVFDIN
STSGCITLSTYPTLLRNELYEIIVKASEVGPNDQLQDYDVTMVTVRVVDLNNHPPTFYGQ
NGPQSKFEVTMHEHPPAGEILRGFKITVNDSDQGANAKFKLRLVGPSRVLRVVPQTVLNE
AQVTIIVEDTSGIDYEKGQTLSFKLLAVEIDTPERFSATADIVINLLDTNDNVPKFTSEY
YIARVPENSPGDSSVVSVTAIDPDSGPWGEVKYTIYGSGSDLFAINRSSGLITTQPWTSL
DAEVRSKYNFYVKAEDSEGKYSLSEVFVTVLDMNDHSPAFDENLLEKTMIIGTPVRVEAV
DEDAESPNNVIEYSIMTADPDNAFDINAATGEIKLKPYIKSMEIVQNITKQKDCKWSLVV
QARDRGSPSFSTTAVVNIDITEATPLKGPMAAFLMKNRDNPMKVLGMVTVIISLLVGVTA
LISAAMYMRNSKSNRIMPARRIIKRRPRDQPWIFNMPVVKFSNPADKFLIVNQERSPKPP
PPSAPPPPCITRPYERPRAVPTISGVLASKGSKKAKSNRRKEGNMSSALVSELKMKLEQK
IIESNQGYY
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaaaagaaaacgcatgctttactctttgtcctcctgcttcacttcaccttg
gcaaggcaatcagactatgctccatatttttatgataatggacccagcagtacacatggg
aatatggccttgttcagcatctctgaggatacaccagtcgggacacagatatacattctg
aatggtacagatccagagggggatccagtgcgatatggtctgacttttgaaatgggctca
aaagaatatttaagggttgactctaaatcaggaagggtgactctgattcaggagctcgac
agagagaagcaagatgaaatctcagtgatggtgagcataacagatggtcgcaataaagtt
gttgagacagttagagtgtttgtcactgatgccaatgacgaaccacctgaatttcaaaat
ctgcctttcatcattgacatcccagaggatactgctccaggaagtagcatctacaaagtc
caagcagcagatagagatttgggctcaggaggcagcgtgtcatattatttacagacctca
ccgtttgctaagtttaccatcgatgggaacagtgggatcctaagagtcaaacctggtgag
actttggactacgagaccacgcctactcactttgtgaccgtggttgcaaaggacggaggt
ggtaggttcaaggggaagcaccaggttttgacctctacagccactatgactatcaatgta
cttgatgcccaagacatgtctccatccttcataggaaccccttattttggctacgtctat
gaagtctctgttcctggttctgaaatattcacagtgtacgctaaagatggagatcaagga
aaccctaacgcaatatattattccattatgaatggtagtgatggcgtctttgacataaat
agcaccagtggatgcatcaccctgtcaacttatccaactcttctgagaaatgaattatat
gaaattatagtcaaggcttctgaggtaggacctaacgatcagctgcaggactacgatgtt
accatggtgacggtccgggtggtggatctcaacaaccatcctccgaccttttacggacag
aacggaccgcagagcaagtttgaggtcacaatgcacgagcatcctcctgcaggggagatc
ctgagaggctttaagatcaccgtcaatgactcagatcagggagcaaacgctaaatttaaa
ctgagattagtggggccgagtcgagtgctgcgagtggttccccagacagtcctcaatgaa
gctcaggtgaccatcattgtggaagacacatctggcatcgactatgaaaagggacaaact
ctctcttttaagctgctggcggtggagatcgacactcctgagaggttcagtgcaacagct
gacatagtgatcaatctgcttgacaccaacgacaacgtccccaaattcacttctgagtat
tacatcgccagggtccctgagaactctcccggagactccagcgttgtgtctgtaacggca
attgatccagattcagggccctggggtgaagtcaaatacacgatttatggatcaggatca
gatttgtttgccatcaaccggtcatcaggcctcatcaccacgcagccctggaccagccta
gatgcagaggttaggtctaaatacaacttctacgtcaaggctgaagattcagagggaaag
tacagtttgtctgaagtctttgtcaccgtcctcgacatgaacgaccactctccagcattt
gatgaaaatctcctggaaaagaccatgattattggtacacctgtcagagtagaggcagtg
gatgaagatgcagagtcccccaacaacgtcattgaatactccatcatgacggccgatcct
gacaatgcgtttgatattaacgcagccactggagagatcaaactgaagccgtacatcaag
tccatggagattgtgcagaacatcaccaagcagaaggactgcaagtggtctctggtggtc
caagccagggacaggggctctccatccttcagcacaacagctgtggtcaacatcgatatc
acagaggcgactcctctcaaggggcctatggcggcctttttaatgaaaaatagggacaat
cctatgaaagttctaggcatggtcactgttatcattagcttattggtaggggtgaccgcc
ttgatctctgcagctatgtacatgcgaaattcaaagtcaaacaggatcatgccagcacgt
cgcatcattaagaggcgacccagggaccagccctggatcttcaacatgcctgttgtcaaa
ttcagcaaccctgcagataagttccttattgtcaaccaggagagaagcccaaagcctccg
ccccccagcgctcccccgcccccatgtatcacacggccatatgagaggccccgggcggtc
ccaaccatatctggtgtgctggcctccaaaggttccaaaaaagctaaatcgaatcgccgt
aaagagggaaatatgagctctgctttggtgtcagagcttaaaatgaagcttgagcagaaa
atcattgagagcaaccaaggttattattaa
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