Anoplopoma fimbria (sablefish): 129091745
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Entry
129091745 CDS
T09102
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129091745
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129091745
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Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
ig
LRR_1
Ig_VEGFR-1-like_5th
Ig_2
fn3
Fn3_ROS1
LRR_6
LRR_14
LRR_EndoS
LRR_9
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
129091745
NCBI-ProteinID:
XP_054455415
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All DBs
Position
5:complement(11889490..11891502)
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AA seq
518 aa
AA seq
DB search
METSMGQIPEDIPHDFTKIRIENCHLTELPGGSFSKVSALEFLWLNFNEITLMNIKSLDG
LANLTELRLQGNKLTSVTWTAFQDTPKLKILDLKHNRLDVLPEHALRHLPKLTYLDLSFN
QLSVISKDVFINWPLYQTAEKAWGKEGLVSNVVLALHDNPWLCDCRLKGFVEFIRAVSPP
IILMNSYLMCSGPASKADKFFHEIQLKTCMKPVASALETNITLPLGENATLTCLVKARPG
PTIQWMYALKIIRGFAASATYIDEETVTSQLVIPSLRLADRGLYTCMANNFIGNSSVSIT
VNINSSNSSALLPPPVPMLSSDEKVFIDIRIAKQTVYGITLEWYAITDNPTETWFTIHFG
KYDSPKKEMIYIGPGINSYTVSNLLPATKYEVCVTLKNHPPRQGQCIVFVTGSDISELEQ
RERLIHIIVIVCAMVLAVPAGMYACTTEARFSCFDRCVNLWKKRRLHGENLQGTERQGTF
DSLQAASDEGLCRDSEDKLKKRRKSEDRGKGGSAAHLY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctccatgggacaaataccagaggacattccacatgatttcacaaaaatccga
attgaaaactgccacctgaccgagttacctggaggatctttttctaaagttagtgcctta
gagttcctctggctgaatttcaatgagatcaccctgatgaacataaaaagcctggatggg
ctggccaacctgactgagctcaggctgcaagggaacaagctgacttcagtaacatggacg
gcctttcaggacaccccgaaactgaagattttggacctgaagcataatcgactggatgtc
ctccccgaacacgctctgagacacttacctaaactgacctacttagatttatccttcaac
cagcttagtgtcatatcaaaagatgtcttcattaattggccactttaccaaacagcagag
aaagcgtggggtaaagaagggctggtctcaaatgtggtcttggcgctgcatgataacccc
tggttgtgcgattgccgcctcaaaggctttgttgaattcatcagggctgtcagccctccc
atcattctcatgaactcttatttgatgtgctcgggccccgcctccaaagctgacaagttt
ttccacgagatccagttaaaaacatgcatgaagccggtggcctctgccctagagactaac
atcactttacctctcggtgaaaatgcaacactcacatgcttagtaaaggccaggccaggt
ccaaccattcaatggatgtacgctctgaagattataagaggatttgctgcttcagcgaca
tatatagacgaggagaccgtcacctcccagctggtgatcccctctcttcgactggcagac
cgaggactctatacctgcatggccaacaacttcattggcaactcctctgtcagcataacg
gttaacatcaactcctccaattcctctgctcttctccctccacccgtcccaatgttgtct
tccgatgagaaagtcttcattgacatccgcatcgccaaacagacagtttacggtatcacc
ctggagtggtacgcaataacagacaacccaacagaaacttggttcaccatccactttggc
aaatatgattcacccaaaaaggagatgatctacattggccccggcatcaacagctacact
gtcagcaacctgcttcctgccaccaaatacgaggtgtgcgtgaccctgaagaaccatcca
ccgaggcagggtcagtgcatcgtgtttgtgacaggaagtgacatcagtgagctggagcaa
agagagagactcatccacattattgttattgtgtgcgccatggtgctggcagtgccggct
ggcatgtacgcctgcaccacggaggctagattcagctgttttgatcgctgtgttaatctg
tggaagaagcgcagactgcacggagagaacctgcagggcacggagaggcaaggcactttt
gacagcctgcaggcagccagcgatgaaggcctttgcagggactcggaagataagcttaaa
aagaggcggaagtcagaggatagaggcaaaggtggaagtgcagcccatttgtactag
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