KEGG   Anoplopoma fimbria (sablefish): 129091807
Entry
129091807         CDS       T09102                                 
Name
(RefSeq) uncharacterized protein LOC129091807
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129091807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afb03000]
    129091807
   03021 Transcription machinery [BR:afb03021]
    129091807
Transcription factors [BR:afb03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    129091807
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129091807
  RNA polymerase III system
    TFIIIB
     129091807
  RNA polymerase I system
    SL1/TIF-1B
     129091807
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 129091807
NCBI-ProteinID: XP_054455476
LinkDB
Position
5
AA seq 273 aa
MDESALERYFDKFIDYDSSKMETEELSGDLSSLPDELLTLFKDDTESRTESCDSSTSLDY
SSQNPTAAAELPDVLSPAVRPVTPVTPETHQPVFHPQIKNVISTVKLGCYLDLLFIARRT
WNVEYKPEVPVVFQVFKALIMRIRRPPTTALFYRSGFIVCSGAKSEEQSRLSARKYCRIV
QNLGFPVRFLDFKIRNIVANCKTFPVRLEQLAYHQPCSYEPELFPGLFYNSFPGISITIF
SSGKMFLSGAKKEDEVYEMLHTVCRILKGFRRL
NT seq 822 nt   +upstreamnt  +downstreamnt
atggacgagtcagcgctggagcggtactttgataaattcattgattatgactcctcaaag
atggagacggaggagttgagcggagatcttagctcactgcctgatgagctcctgacactc
tttaaggacgacactgagagcagaacagagtcctgtgacagcagcaccagtctggactac
agctcccagaatcccacagcagcggctgagctcccagatgtcttgtccccggcggttcgt
cccgtgaccccggtgacccctgagacacatcaaccagtattccacccccagataaagaac
gtcatctccacggtgaagctgggctgctatctggacctgctctttatagctcgcagaacc
tggaacgtagagtacaaaccagaggtacctgttgtgttccaggttttcaaggcgctcatc
atgaggatccgtcggccgccaaccacagcgctgttctacagatctgggttcatcgtgtgt
tcaggagccaagagtgaggagcagtcgcggctgtcggccaggaagtactgccgcatcgtt
caaaatctgggcttccccgtccgcttcctggacttcaagatccggaacatcgtggccaac
tgcaagaccttcccggtcagactggaacagctggcttaccatcagccctgcagttatgaa
ccggagctgtttcctggactcttctacaacagttttcctggtatctccatcaccatcttc
tcatctggaaaaatgtttctgagcggagctaaaaaggaggatgaggtctacgaaatgctt
cacaccgtctgtagaatcctgaagggcttcaggaggctgtga

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