Anoplopoma fimbria (sablefish): 129091905
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Entry
129091905 CDS
T09102
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
afb04054
]
129091905
Pattern recognition receptors [BR:
afb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129091905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
129091905
NCBI-ProteinID:
XP_054455561
LinkDB
All DBs
Position
6:21748634..21765568
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AA seq
1103 aa
AA seq
DB search
MLLEENILTFVKNELKKIQKVVSSDYPECLGVDEELLDGEDEEQRRSSREAFLKITLHFL
RRMKQEELADCLQSSHTGVCQRELKSNLKKKFQCVFEGIAKEGKPILLNQIYTELYITEG
GTAEVNDEHEVRQIETASRKSDRPETTIRQEDIFKVSPGREEPIRTVMTKGVAGIGKTVL
TQKFTLDWAENKANQDIQFTFPFTFRELNLLKEKKYSLVELVHHFFSEIKEAGICSFEEF
PVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAA
NQIPPECVGMVTEVRGFTDPQKEEYFRKRCRDEEHASRIISHIKTSRSLHIMCHIPVFCW
ITATVFDNVLKTREGGELPKTLTEMYIHLLVVQSKLKNVKYDGGAETDPHWSPETKKMTE
SLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREEKGLYQDTVFCFIHL
SVQEFLAALHVHLTFINSGVDLLSEEQTTSRLSEVFRDKPKLTHFYQSAVDKALQSPNGN
LDLFLRFLLGLSLPTNQTLLRGLLTKTGITSQTNRRTIQYIKKKISEDLSAEKSINLFHC
LNELNDGSLVEEIQQSLSSEHLSTDKLSPAQWSALVFILLSSEKDLDMFDLIKYSASEEA
LLRLLPVVKAYNKTLLSGCNLSEKSCEALSSVLSSQSSNLRELDLSNNDLQDSGVRLLSA
GLESPDCKLETLRLSGCNLSERSCEAQSSVLRSQSSSLRELDLSNNDLQDSGMKLLSAGL
ESPHCKLETLRVSVCNLSERSCGALSSVLSSQSSSLRELDMSNNDLQDSGVKLLSAGLES
PHCELDTLRMSGCLITEKGCASLASALSFNPSHLRELDLSYNHPGESGVKLLSAGVEDPH
WSLETLRVEPAGVRWFRPGLRKYSCELALDTNTVHRKLKLSDNNRKLTHVDEDQSYPDHP
DRFDYWEQLLCRTGLTGRCYWEVEWKGGVYISVSYRGIRRRGDNDDCLFGGNDQSWSLFC
SDDGYFVYHNKTRTSISYSSSSSSGRVAVYVDCPAGSLSFYRVSSDTLIHLHTFNTTFTE
PLYPGFGSRFKSWSGSSVSLCSL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggaggagaacatcctcacttttgtgaagaacgagctgaagaagatccagaag
gttgtgagttcagattacccagaatgcttgggggtggatgaggagctgttggacggtgag
gatgaagagcagaggaggagcagcagagaggcatttctgaagatcacactgcacttcctg
aggagaatgaagcaggaggagctggctgactgtctgcagagcagtcatacgggagtttgt
cagcgtgaactcaaatctaacctgaagaagaagttccagtgtgtgtttgaggggatcgct
aaagaaggaaagccaatccttctgaaccagatctacacagagctctacatcacagaggga
gggactgcagaggtcaatgatgaacatgaggtcagacaaattgaaacagcatccaggaaa
tcagacagaccagaaacaaccatcagacaagaagacatctttaaagtctcacctggaaga
gaggaaccaatcagaacagtgatgacaaaaggagtggctggcattgggaaaacagtctta
acacagaagttcactctggactgggctgaaaacaaagccaaccaggacatacagttcaca
tttccattcacctttagagagctgaatttgctgaaagagaaaaagtacagcttggtggaa
cttgttcatcacttcttctctgaaatcaaagaagcaggaatctgcagttttgaagagttc
ccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaac
aatgagatcctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctc
atcagggggaaactgcttccctctgctcgcctctggataaccacacgaccagcagcagcc
aatcagatccctcctgagtgtgttggcatggtgacagaggtccgagggttcactgacccc
cagaaggaggagtacttcaggaagagatgcagagatgaggagcatgccagcaggatcatc
tcccacatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttctgctgg
atcactgctacagtttttgacaatgtgttgaagaccagagagggaggagagctacccaag
accctgactgagatgtacatccacttactggtggttcagtccaaactgaagaacgtcaag
tacgatggaggagctgagacagatccacactggagtccagagaccaagaagatgactgag
tctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcc
gacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcaca
cagatctttagagaggagaaaggactgtaccaggacacggtgttctgcttcatccatctg
agtgttcaggagtttctggctgctcttcatgtccatctgaccttcatcaactctggtgtc
gatctgctgtcagaagaacaaacaacctcccgattgtctgaagtctttagagacaaacct
aaactaacacatttctaccagagtgctgtggacaaggccttacagagtccaaacggaaac
ctggaccttttccttcgcttcctcctgggtctatcactgccgaccaatcagactctccta
cgaggtctgctgacaaagacaggaataacttcacagaccaatcggagaacaatccagtac
atcaagaagaagatcagtgaggatctgtctgcagagaaaagcatcaatctgttccactgt
ctgaatgaactgaatgatggttctctagtggaggagatccaacagtccctgagttcagaa
catctctccacagataagctgtctcctgctcagtggtcagctctggtcttcatcttactg
tcatcagaaaaagatctggacatgtttgacctgattaaatactctgcttcagaggaggct
cttctgaggctgctgccagtggtcaaagcctacaacaaaactctactgagtggctgtaac
ctctcagagaaaagttgtgaagctctgtcctcagtcctcagctcccagtcctctaatctg
agagagctggacctgagtaacaacgacctgcaggattcaggagtaaggctgctgtctgct
ggactggagagtccagactgtaaactggaaactctaagactgagtggctgtaacctctca
gagagaagctgtgaagctcaatcctcagtcctcaggtcccagtcctccagtctgagagag
ctggacctgagtaacaacgacctgcaggattcaggaatgaagctgttgtctgctggactg
gagagtccacactgtaaactggaaactctcagagtgagtgtctgtaacctctcagagaga
agctgtggagctctgtcctcagtcctcagctcccagtcatctagtctgagagagctggac
atgagtaacaacgacctgcaggattcaggagtgaagctgctgtctgctggattggagagt
ccacactgtgaactggacactcttaggatgtcaggctgtctgatcacagagaaaggctgt
gcttctctggcctcagctctaagcttcaacccctcccatctgagagagctggacctgagc
tacaatcatccaggagaatcaggagtgaagctgctgtctgctggggtggaggatccacat
tggagcttggaaactctcagggtggagcctgctggagtccgatggttcagaccaggtctg
aggaagtattcctgtgaactcgcactcgacacaaacacagtacacagaaaactcaaactg
tctgacaacaacaggaagttgacacatgtggatgaagatcagtcatatcctgatcatcca
gacagatttgactactgggagcagctgctgtgtagaactggtctaactggtcgctgttac
tgggaggtcgagtggaaaggaggagtttatatatcagtgagttacagaggaatcagaagg
agaggagacaatgatgactgtttgtttggagggaatgatcagtcctggagtctgttctgc
tctgatgatggttactttgtctatcacaataagacaagaacatccatctcctactcctcc
tcctcctcctctggtagagtagcagtgtatgtggactgtcctgctggctctctgtccttc
tacagagtctcctctgacacactgatccacctccacaccttcaacaccacattcactgaa
cctctttatcctgggtttgggtccaggttcaagtcctggtctggttcctcagtgtctctg
tgttctctgtag
DBGET
integrated database retrieval system
