Anoplopoma fimbria (sablefish): 129091907
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Entry
129091907 CDS
T09102
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
afb04054
]
129091907
Pattern recognition receptors [BR:
afb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129091907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
129091907
NCBI-ProteinID:
XP_054455565
LinkDB
All DBs
Position
6:726576..734715
Genome browser
AA seq
1068 aa
AA seq
DB search
MLLEENILTFVKNELKKIQKVVSSDYPECLESQRVDEEVLDGEDEEQRRSSREAFLKITL
HLLRRMKQEELADCLQSRLLAAVCQRELKSNLKKKFQCVFEGIAKAGNPTLLNQIYTELY
ITEGGTAEVNDEHEVRQIETASRKPDRPETTIRQEDIFKASPGREEPIRTVMTKGVAGIG
KTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVLKEKKYSLVELVHHFFSETKEAGICR
FEEFPVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTR
PAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFSDKEQASRIISHIKTSRSLHIMCHIP
VFCWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQSKLKNVKYDGGAETDPHWSPESR
KMTESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREERGLYQDKVFC
FIHLSVQEFLAALHVHLTFINSGVNLLSEEQTTSRGSKVFRDKPKLTHLYQSAVDKALQS
PNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSSSQTNQETVQFIKKKIDEDLSAEKSIN
LFHCLNELNDGSLVEEIQQSLSSGRLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSA
SEEALLRLLPVVKASNKALLSVCNLSERSCEALSSVLSSQSSSLRELDLSNNNNLQDSGV
KLLSAGLESPHCKLETLRLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKL
LSAGLESPHCKLETLRLSGCLITEEGCASLDSALSSNPSHLRELDLSYNSPGDSGVKLLS
AGLEDPHWRLETLRVEPAGVRWFTPGLRKYSCELTLDTNTVNRRLKLSDNNRKVTYVEEY
QSYPDHPDRFDHSPQLLCRTGLTGRCYWEVEWRGRVHISVSYRGIRRRGDSGDCWFGEND
QSWSLRCSDGGYYVYHNKTRTTISSSSSSSSSSSSGRVAVYVDCPAGSLSFYRVSSDTLI
HLHTFNTTFTEPLYPGFRFWLSGSSVSLCSLEEGESPPGRETFSLLTR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggaggagaacatcctcacttttgtgaagaacgagctgaagaagatccagaag
gttgtgagttcagattacccagaatgcttagagagtcagagggtggatgaggaggtgttg
gacggtgaggatgaagagcagaggaggagcagcagagaggcatttctgaagatcacactg
cacctcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcagacttctt
gctgcagtttgtcagcgtgaactcaaatctaacctgaagaagaagttccagtgtgtgttt
gaggggatcgctaaagcaggaaacccaacccttctgaaccagatctacacagagctctac
atcacagagggagggactgcagaggtcaatgatgaacatgaggtcagacagattgaaaca
gcatccaggaaaccagacagaccagaaacaaccatcagacaagaagacatctttaaagcc
tcacctggaagagaggaaccaatcagaacagtgatgacaaagggagtggctggcattggg
aaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggac
atacagttcacatttccattcaccttcagagagctgaatgtgctgaaagagaaaaagtac
agcttggtggaacttgttcatcacttcttctctgaaaccaaagaagcaggaatctgcagg
tttgaagagttcccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctg
gacttccacaacaatgagatcctgactgatgttacagagtccacctcagtggatgtgctg
ctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacga
cctgcagcagccaatcagatccctcctgagtgtgttggcatggtgacagaggtcagaggg
ttcactgacccccagaaggaggagtacttcaggaagagattcagtgataaggagcaggcc
agcaggatcatctcccacatcaagacctcacgaagcctccacatcatgtgccacatccca
gtcttctgctggatcactgctacagttctggaggatgtgttgaagaccagagagggagga
gagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaactg
aagaacgtcaagtatgatggaggagctgagacggatccacactggagtccagagagcagg
aagatgactgagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatc
ttctatgaatccgacctgacagagtgtggcatcgatatcagagcagcctcagtgtactca
ggagtgttcacacagatctttagagaggagagaggactgtaccaggacaaggtgttctgc
ttcatccatctgagtgttcaggagtttctggctgctcttcatgtccatctgaccttcatc
aactctggtgtcaatctgctgtcagaagaacaaacaacctcccgggggtctaaagtcttt
agagacaaacctaaactaacacatctctaccagagtgctgtggacaaggccttacagagt
ccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaat
cagactctcctacgaggtctgctgacacagacaggaagtagctcacagaccaatcaggaa
acagtccagttcatcaagaagaagatcgacgaggatctctctgcagagaaaagcatcaat
ctgttccactgtctgaatgaactgaatgatggttctctagtggaggagatccaacagtcc
ctgagttcaggacgtctctccacagataaactgtctcctgctcagtggtcagctctggtc
ttcatcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgct
tcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactg
agtgtctgtaacctctcagagagaagctgtgaagctctgtcctcagtcctcagctcccag
tcctctagtctgagagagctggacctgagtaacaacaacaacctgcaggattcaggagtg
aagctgctgtctgctggactggagagtccacactgtaaactggaaactctcagactgagt
ggctgtaacctctcagagagaagctgtgaagctctgtcctcagtcctcagctcccagtcc
tctagtctgagagagctggacctgagtaacaacgacctgcaggattcaggagtgaagctg
ctgtctgctggactggagagtccacactgtaaactggaaactctcaggctgtcaggctgt
ctgatcacagaggaaggctgtgcttctctggactcagctctgagctccaacccctcccac
ctgagagagctggacctgagctacaattctccaggagactccggagtgaagctgctgtct
gctggactggaggatccacactggagactggaaactctcagggtggagcctgctggagtc
cgatggttcacaccaggtctgaggaagtattcctgtgaactcacactcgacacaaacaca
gtgaacagaagactcaaactgtctgacaacaacaggaaggtgacatatgtggaggagtat
cagtcatatcctgatcatccagacagatttgaccactctcctcagctgctgtgtagaact
ggtctgactggtcgctgttactgggaggtcgagtggagaggaagagttcatatatcagtg
agttacagaggaatcagaaggagaggagacagtggagactgttggtttggagagaatgat
cagtcctggagtctgagatgctctgatggtggttactatgtctatcacaataagacaaga
acaaccatctcctcctcctcctcctcctcctcctcctcctcctctggtagagtagcagtg
tatgtggactgtcctgctggctctctgtccttctacagagtctcctctgacacactgatc
cacctccacaccttcaacaccacattcactgaacctctttatcctgggttcaggttctgg
ttatctggttcctcagtgtctctgtgttctctggaggagggagagtctcctcctggtaga
gaaactttctctctgctgaccagatag
DBGET
integrated database retrieval system
