Anoplopoma fimbria (sablefish): 129091942
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Entry
129091942 CDS
T09102
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03008
Ribosome biogenesis in eukaryotes
afb03013
Nucleocytoplasmic transport
afb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129091942 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
129091942 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129091942 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129091942 (xpo1b)
03009 Ribosome biogenesis [BR:
afb03009
]
129091942 (xpo1b)
03016 Transfer RNA biogenesis [BR:
afb03016
]
129091942 (xpo1b)
03036 Chromosome and associated proteins [BR:
afb03036
]
129091942 (xpo1b)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129091942 (xpo1b)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129091942 (xpo1b)
Pre-60S particles
129091942 (xpo1b)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129091942 (xpo1b)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129091942 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Motif
Other DBs
NCBI-GeneID:
129091942
NCBI-ProteinID:
XP_054455615
LinkDB
All DBs
Position
6:22305145..22334249
Genome browser
AA seq
1074 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGKGGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFV
PPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKN
FEEFPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGK
ITTVLNPSSPTNNQGFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRD
FLVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctatatcacggggtggga
ccgcagcaaagaatggcacaagaagtgttgacgcacttaaaagagcacccggacgcctgg
acgagagtggacaccatcctcgagttctcccagaacatgaacaccaaatactatgccctt
cagattctggaaacggttatcaaaacaagatggaagattctccccaggaatcagtgtgaa
ggtataaaaaagtatgttgttggtctcattatcaagacttcatcagacgcatcaaatgtg
gagaaagaaaaggtgtacatcggcaagctgaacatgatccttgtccagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagcgacattgtcggagcgagtcgcaccagt
gagagcctttgtcagaacaacatgatcattctcaaactgctcagcgaggaggtcttcgat
ttctccagtggacaaatgacccaggtcaaggccaagcacctaaaggacagcatgtgcaat
gaattctcccagatattccagctctgccagttcgtcatggaaaactcccagaacgccccc
ctggtccacgccaccctggagaccctcctacgttttctcaactggattcctctggggtac
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaacgtgcccatgttt
cgcaatgtgacactgaagtgcctcacagagatcgccggtgtgagcgtcagccagtacgag
gagcagtttgtcacgctcttcaccctgaccatgtgtcaactcaaacagatgctgcctctg
aacaccaacatccggctggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagtctgttcctctgcactttcctcaaagagcacgggcagctcatcgagaagcgg
ctcaacctcagagaaacattaatggaggccctccactacatgctgctggtgtccgaggtg
gaggagacggagatcttcaaaatttgtctggagtattggaaccacttggctgcagagctc
tacagagagagtcccttctctacgtccacgtccccgctgctctccggcaaccagcacttt
gacgttccaccacgcagacagctctacctgcccgtactctccaaggtgcgtctgctcatg
gtgagtcggatggcaaagccagaggaggtgctggtggtggagaatgaccagggagaggtg
gtcagagagttcatgaaggacaccgactccatcaacctctacaagaacatgagagaaacc
ctcgtgtacctgactcacttggactacgcagacacagaacgcataatgacggaaaagctt
cacaaccaggtgaacggcacagagtggtcctggaagaacctcaacacgttgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgcgagcagaagagagggaaggacaacaaggccatcata
gcctccaacatcatgtacattgtcggccagtatccacgctttctcagagcccattggaag
ttcctcaaaaccgtcgtcaacaaactctttgagttcatgcacgagacgcacgatggtgtt
caggacatggcctgtgacacgttcatcaagatcgcccagaagtgccggcgccactttatc
caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgaccttcagcctcagcaggtgcacacattctatgaggcagtaggttatatg
attggtgctcagacggatcaggctgttcaagagcacctgatagaaaaatacatgctgctg
cccaaccaagtgtgggacagcatcattcagcaggccaccaagaacgtggacatcttgaag
gacccagaaacggtgaaacagctgggcagcatcctaaagaccaacgtccgagcttgcaag
gccgtgggacacccctttgtcatccagctgggacggatttacctggacatgctcaacgtc
tacaagtgcctcagcgagaacatctctgctgccattcagacaaatggtaagggaggtgag
atggtgacgaagcagcccctgatccggagtatgagaacggtgaaacgagagacactgaaa
ctgatctcaggctgggtcagccgatcaaacgacccacagatggttggggagaactttgtc
ccgccgctgctggacgccgtcctcatcgactatcagcgcaacgtccccgccgcccgcgag
cccgaggtcctcagcaccatggcaaccatcgtcaacaagctggggggacacatcaccagc
gagataccccagatctttgatgccgtcttcgagtgcacactaaacatgatcaacaagaac
tttgaggagttcccggagcacaggactcacttcttctacttactgcaagcggtgaactct
cactgcttccccgcattcctcgcaatcccccctgcccagttcaaactggtgctggactcc
atcatctgggccttcaaacacaccatgaggaacgtggctgatactggtctgcagattctc
tacacgctgctgcagaatgtggcccaggaggaagcagccgctcagagtttctaccagacg
tacttctgtgatatcctacaacacatcttctctgtggtcaccgacacatcgcatactgct
ggcctgacgatgcacgcgtccatcctggcctacatgttcaacctggtggaggaggggaag
atcaccacggtgctgaacccttccagccccaccaacaaccagggcttcatccaggagtac
gtcgccaacctgctcaagaccgccttccctcacctacaagatgctcaggtgaaggtgttt
gtgaccgggctgttcagcctaaaccaggatattcccgccttcaaggagcaccttagggac
ttcctcgtccagataaaggagtttgccggcgaggacacctcggacctgttcctggaggag
agagaggcgtcgctccgtcaggcccaggaggagaaacacaagatccagatgtccgtcccg
ggcatcctcaacccgcacgagatcccagaggagatgtgcgactga
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