KEGG   Anoplopoma fimbria (sablefish): 129091942
Entry
129091942         CDS       T09102                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03008  Ribosome biogenesis in eukaryotes
afb03013  Nucleocytoplasmic transport
afb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129091942 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    129091942 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129091942 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129091942 (xpo1b)
   03009 Ribosome biogenesis [BR:afb03009]
    129091942 (xpo1b)
   03016 Transfer RNA biogenesis [BR:afb03016]
    129091942 (xpo1b)
   03036 Chromosome and associated proteins [BR:afb03036]
    129091942 (xpo1b)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     129091942 (xpo1b)
Ribosome biogenesis [BR:afb03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    129091942 (xpo1b)
  Pre-60S particles
    129091942 (xpo1b)
Transfer RNA biogenesis [BR:afb03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    129091942 (xpo1b)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     129091942 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v
Other DBs
NCBI-GeneID: 129091942
NCBI-ProteinID: XP_054455615
LinkDB
Position
6:22305145..22334249
AA seq 1074 aa
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGKGGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFV
PPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKN
FEEFPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGK
ITTVLNPSSPTNNQGFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRD
FLVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctatatcacggggtggga
ccgcagcaaagaatggcacaagaagtgttgacgcacttaaaagagcacccggacgcctgg
acgagagtggacaccatcctcgagttctcccagaacatgaacaccaaatactatgccctt
cagattctggaaacggttatcaaaacaagatggaagattctccccaggaatcagtgtgaa
ggtataaaaaagtatgttgttggtctcattatcaagacttcatcagacgcatcaaatgtg
gagaaagaaaaggtgtacatcggcaagctgaacatgatccttgtccagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagcgacattgtcggagcgagtcgcaccagt
gagagcctttgtcagaacaacatgatcattctcaaactgctcagcgaggaggtcttcgat
ttctccagtggacaaatgacccaggtcaaggccaagcacctaaaggacagcatgtgcaat
gaattctcccagatattccagctctgccagttcgtcatggaaaactcccagaacgccccc
ctggtccacgccaccctggagaccctcctacgttttctcaactggattcctctggggtac
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaacgtgcccatgttt
cgcaatgtgacactgaagtgcctcacagagatcgccggtgtgagcgtcagccagtacgag
gagcagtttgtcacgctcttcaccctgaccatgtgtcaactcaaacagatgctgcctctg
aacaccaacatccggctggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagtctgttcctctgcactttcctcaaagagcacgggcagctcatcgagaagcgg
ctcaacctcagagaaacattaatggaggccctccactacatgctgctggtgtccgaggtg
gaggagacggagatcttcaaaatttgtctggagtattggaaccacttggctgcagagctc
tacagagagagtcccttctctacgtccacgtccccgctgctctccggcaaccagcacttt
gacgttccaccacgcagacagctctacctgcccgtactctccaaggtgcgtctgctcatg
gtgagtcggatggcaaagccagaggaggtgctggtggtggagaatgaccagggagaggtg
gtcagagagttcatgaaggacaccgactccatcaacctctacaagaacatgagagaaacc
ctcgtgtacctgactcacttggactacgcagacacagaacgcataatgacggaaaagctt
cacaaccaggtgaacggcacagagtggtcctggaagaacctcaacacgttgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgcgagcagaagagagggaaggacaacaaggccatcata
gcctccaacatcatgtacattgtcggccagtatccacgctttctcagagcccattggaag
ttcctcaaaaccgtcgtcaacaaactctttgagttcatgcacgagacgcacgatggtgtt
caggacatggcctgtgacacgttcatcaagatcgcccagaagtgccggcgccactttatc
caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgaccttcagcctcagcaggtgcacacattctatgaggcagtaggttatatg
attggtgctcagacggatcaggctgttcaagagcacctgatagaaaaatacatgctgctg
cccaaccaagtgtgggacagcatcattcagcaggccaccaagaacgtggacatcttgaag
gacccagaaacggtgaaacagctgggcagcatcctaaagaccaacgtccgagcttgcaag
gccgtgggacacccctttgtcatccagctgggacggatttacctggacatgctcaacgtc
tacaagtgcctcagcgagaacatctctgctgccattcagacaaatggtaagggaggtgag
atggtgacgaagcagcccctgatccggagtatgagaacggtgaaacgagagacactgaaa
ctgatctcaggctgggtcagccgatcaaacgacccacagatggttggggagaactttgtc
ccgccgctgctggacgccgtcctcatcgactatcagcgcaacgtccccgccgcccgcgag
cccgaggtcctcagcaccatggcaaccatcgtcaacaagctggggggacacatcaccagc
gagataccccagatctttgatgccgtcttcgagtgcacactaaacatgatcaacaagaac
tttgaggagttcccggagcacaggactcacttcttctacttactgcaagcggtgaactct
cactgcttccccgcattcctcgcaatcccccctgcccagttcaaactggtgctggactcc
atcatctgggccttcaaacacaccatgaggaacgtggctgatactggtctgcagattctc
tacacgctgctgcagaatgtggcccaggaggaagcagccgctcagagtttctaccagacg
tacttctgtgatatcctacaacacatcttctctgtggtcaccgacacatcgcatactgct
ggcctgacgatgcacgcgtccatcctggcctacatgttcaacctggtggaggaggggaag
atcaccacggtgctgaacccttccagccccaccaacaaccagggcttcatccaggagtac
gtcgccaacctgctcaagaccgccttccctcacctacaagatgctcaggtgaaggtgttt
gtgaccgggctgttcagcctaaaccaggatattcccgccttcaaggagcaccttagggac
ttcctcgtccagataaaggagtttgccggcgaggacacctcggacctgttcctggaggag
agagaggcgtcgctccgtcaggcccaggaggagaaacacaagatccagatgtccgtcccg
ggcatcctcaacccgcacgagatcccagaggagatgtgcgactga

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