Anoplopoma fimbria (sablefish): 129091984
Help
Entry
129091984 CDS
T09102
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129091984 (sorcs3b)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Others
Others
129091984 (sorcs3b)
Endosome - Lysosome transport
129091984 (sorcs3b)
Endosome - Golgi transport
129091984 (sorcs3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
129091984
NCBI-ProteinID:
XP_054455687
LinkDB
All DBs
Position
6:complement(10924305..10964339)
Genome browser
AA seq
1246 aa
AA seq
DB search
MGLWSFLSFSLLAFVLLGSFHPKFVAQAEISSPRANDRYYRLEVTPLEALATRKSTEIKV
DNRAKVFIASESGANVDLKQNNGKQVRDGTQRGLGNEALIGNKTAPNCHNRLEIPGKKCN
NISEDNQGQPAANVMLENTFPDLKKKAKRSARTTFTENVDRSTSGEAQSRERFSETVQGV
SNSRPEYRRAGEEPRGSNPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKL
YDFNLGAVTESSLWRSSDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESA
VLISSDEGASFEKHPINFNILSLLFHPAQENWILAYSHDSKLYSSMDFGRKWQLIHDNVM
PGRFYWAVMGLDRESDVVHIETRIAEGRAQYVKCRAQRCTEANRLYLFPGYVDTNSLVVQ
DEYVFTQVTKSGQASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNN
TYSLYISDSPGVYFTLSLENLRTGRGPGGNLLVDFYKVEGINGMYLANKLLDSHVKTFIT
YNKGQTWALLPAPANDVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVAA
GNIGTELSSTNLGMFITSDAGNSWRQIFDQEHNVSFLDNGGALLAVLHATAPIRHLWISL
DEGKKWDRHSFSLAPLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFNRRCM
DGDYQRWQLHNKGELCVMGEKQIFMKRRPGNRCMLAQDYSRIYSSEPCLCTAYDFECDYG
WERQVDGKCSPAFWFNPNGATKSCSTSQSFLNSTGYRKVLSNNCKEGGRNVYSPKRQACR
PRPPRGLRLSTSQGELSATVGSNVTFMVYLDDGDSLRTSIQLDFGDGIKITYSNLSRTDD
GINHVYRTTGIYRVTVSAENNQGSDSNTLFLHITSPVERVYLSAPIVAIRGKEVNLTAVV
WPSHTRTLTFFWWFDNSSEPIITLEGSISYTFQREGKNKVTVQVSSGSTIMQDSKVITVK
EFFRSLLLSFSLALDEHNPDIPEWRDDIGRVVRTALSQVSGVPQDQLLVSLYPGLPSTAE
LFILPDEHTSSEHKRGSEEALERISDIFVTALNQGLIQFELKTDIHIVVYLTQQTSAPLV
DSNSIHSGSAMLMLLTVVFVGLAAFFIYKFKRKIPWIHVQTEDSHEKEPEVISTVGQNDN
MSKVKLSEFPSPKKLMEKELEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgggactgtggtcattcctcagtttctccctcttggctttcgtgttgctgggctctttt
catcccaagtttgtggctcaagcggaaataagttccccaagagcaaacgacagatattat
cgcctggaggtaacgccgctggaggcacttgcaacccgaaaatcaacagagattaaggtc
gacaatagagcaaaagttttcatcgcttcagaatcgggagcaaacgttgatttgaaacag
aacaatggcaagcaagtaagggatggcacacagaggggacttggaaacgaggcgctgatc
ggcaacaaaacggcaccaaactgtcacaaccgtctcgaaataccaggtaaaaagtgtaat
aacatatccgaggacaaccaagggcaacctgcagcaaatgtaatgttagaaaacacgttt
cctgacttaaaaaagaaggcaaaaaggagtgcgcgtacaacatttaccgaaaatgtggat
aggagtacaagtggagaagctcagtcaagagagaggttttcggagactgtccaaggagtt
tccaactccagacccgagtaccggcgcgctggggaggaacccagagggtcgaacccgagg
cagagtgagccccacctggacacctccactttcgctctgtcgggagactcggcgcacaac
caggcgatggtgcactggtccggacacaacagcagcgtgatcctgatcttgactaagctg
tatgacttcaacctgggggctgttactgagagctcactctggagatcctctgattatgga
agcacctacaccaaactcaacgacaaagtgggctcaaggacagttttaagttacctgtat
gtctgtcctaccaacaaacagaagataatgatgcttagcgacccagaggtagagagcgca
gttctcatcagttcagatgaaggggcgagctttgagaagcatcccattaacttcaatatc
ctgagcctgctcttccaccctgcacaggagaactggatactggcttacagtcatgacagc
aagctgtacagttcaatggactttgggaggaaatggcagcttattcacgacaacgtgatg
ccaggccgattctactgggcggtaatggggctggacagagaatcagatgttgtccacatc
gagacgcgcatcgcagaaggccgcgcccagtatgtgaagtgcagagcccaacgatgcaca
gaagccaatagactgtacctctttcctggatatgtagacaccaactcactggttgtgcag
gatgaatatgttttcacacaggtaaccaagtcaggacaagccagctacttcgtctcctac
atgagagaatccttcaagcggatgaaattacctaaatattgtctaccaaaggacatgcat
attatcagtacggatgagaagcaggtatttgctgcagtccaggagtggaatcagaacaac
acatacagcctgtatatctcagactcccccggggtctactttaccctttcattagagaac
ctgagaaccggcagaggacccggcggtaacctactggtagacttttataaggttgagggg
ataaatggcatgtatcttgccaacaaactgctggacagtcatgtcaagactttcatcaca
tacaacaagggacaaacatgggccctgttgccagctcctgccaatgatgtggctggaaat
aaccttcactgcattctgccattttgttcgctgcatcttcatctggagatgtcggagaat
ccctacacatctggacccattaccagcaaaaagtctgtgccaggaatcatcgtggctgca
gggaatatcggaacagagctgtcctccactaaccttgggatgtttataacatctgatgca
ggaaatagctggagacagatttttgatcaagagcacaacgtttcatttcttgacaatgga
ggggctttgctggcagtcttacatgcaacggcgcctattcgacacttatggatcagtcta
gacgaaggaaaaaaatgggaccgtcacagtttctccttggcccctctgtatgtggacgga
gttttaatggagccagaatctgacaatcacattatcactttctttggacacttcagtcat
cggtcagaatggcagctgatcaagatcgactacaaaggcctctttaacaggagatgcatg
gatggagattatcaaagatggcaactgcacaacaagggagagctgtgtgtgatgggtgag
aagcagatctttatgaagcgcaggccaggcaaccgttgcatgctggcccaggactattca
aggatctattcctcagagccatgcctctgcacagcctatgattttgaatgtgattatggg
tgggaacgccaggtggacgggaaatgctcccctgctttttggtttaatccaaatggtgcg
actaaaagctgcagcaccagccaaagctttcttaacagcacagggtatcgaaaggttttg
tccaataactgtaaggagggagggaggaacgtgtactcgcccaagaggcaggcatgtcgt
cccagacccccccgaggcctacggctgtccaccagccagggagagctcagtgccactgtt
gggagcaacgttactttcatggtctacctggatgatggagactcgttgaggaccagcatc
cagctagacttcggggacggcattaagatcacatactctaacctgagcaggaccgatgat
ggcatcaaccatgtctacagaacgactgggatttatagagtgacagtttctgctgaaaac
aaccagggatctgacagcaacaccctgtttttacacatcaccagtccagtggagcgtgta
tatctctctgctcctattgtagccatcagggggaaggaggttaatctgactgcggtggta
tggccaagtcacaccagaacattgaccttcttctggtggtttgacaacagctccgagccc
attataaccttggagggaagcatttcatacacatttcagagagaaggaaaaaacaaggtc
acggtccaggtttcttctggaagcaccataatgcaggattcaaaagttataactgttaaa
gaattcttcaggtcgctactgttgtcattttcgctagctcttgatgagcacaatcctgac
atcccggagtggagggacgacataggccgcgtggtgcggacagctctgtcacaggtttcc
ggggtccctcaagatcagcttctggtgtctttgtatcctggacttccatctacagcagag
ctctttatcctgcctgatgagcatacatcaagtgagcacaagcgagggagtgaggaggct
ctagagaggatatccgatatttttgtcactgccctgaaccaaggcctgatccagtttgag
ctgaaaacggatattcacattgttgtgtacctgactcagcaaacttcagcaccacttgtg
gattctaactccatccatagtgggtcagccatgctgatgctgctcaccgtggtctttgtt
ggtttagcagcattcttcatctacaagttcaaaaggaaaatcccttggatccatgttcaa
actgaggacagtcatgagaaggaaccggaggtgatcagtacagtcggtcagaatgacaac
atgtcaaaggtcaagctcagtgagtttccctctccgaaaaaactcatggaaaaggagctg
gaggccaggagcagaggaggaattggaagaaacatggagagaattgttacaagggaattt
ccaaactgtactaacgtctaa
DBGET
integrated database retrieval system
