Anoplopoma fimbria (sablefish): 129091985 Help Entry 129091985         CDS       T09102                                  Symbol ccdc88ab Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism afb  Anoplopoma fimbria (sablefish) Brite KEGG Orthology (KO) [BR:afb00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:afb03037]     129091985 (ccdc88ab) Cilium and associated proteins [BR:afb03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    129091985 (ccdc88ab) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N HOOK KASH_CCD GAS DUF4472 Motif Other DBs NCBI-GeneID:  129091985 NCBI-ProteinID:  XP_054455688 LinkDB All DBs Position 6:complement(7370196..7434959) Genome browser AA seq 2004 aa AA seqDB search MESEVFSPLLEQFMLTPLVCWVKTVGQATFTDGTQLSEYIELVDGIYLNEIMLEINPKAT VQRTNKKVNNDPTLRIQNLSILIRQIKDYYQETLQQLVMMPLPNVLILGRNPLSEQGLEE MKKMLLLLLGCAVQCEKKEEYIECIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLESGE MPPEDLDSLSRNLAFHLKRLVDDRDTQLETIVELTQERDCVQLSPLAPCPTQSPGDSPSM RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVELKRLQQESYQLVS DARSARAYRDELDALREKAIRVDKLESELSRYKERLHDIEFYKARVEELKEDNQVLLETK SMLEEQLDASRTRSDKLHLLEKESLQIKSKIHDLEMERDMDRKRMEELMEENLVLEMAQK QSMDESLHLGWELEQLSKTPELTEAPQKSLGEEVNELTSSRLLKLEKDNQTLLKTVEELR GAASQDTVTKLTKVNQENQRLNQKLEHLGSELTADREALRSAESLSTDLMKEKALLEKTL ETLRENSERQLKGLEQENKHLSQTVSSLRQRCQVGAEARVKDVEKENRVLHESICETTAK LNKIEFERKQLRKELEVVKEKGERAEELEVLMQKLERDNESLQKKVASLGITCEKVSSLE KENMDLEAEGRRLKKKLDTLKNMAFQLEALEKENSQLEHENLELRRSAESLRSAGAKAAQ LEAENRELESERSQLKRSLELLKASSKKTERLEMSYQGLDTENQRLQKALENSSKKIQQL EVELQEVETENQTLQRNLEELKISSKRLEQLEQENKILEQESSQLEKDKKHLEKENKRLR QQAEIRDSKLDDNNQRISTLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKLSTIDKK TLNTLREELVSEKLRTQQMNNDLDKLTHELEKIGLNKERLLHDEGSSDRFKLLETQLESS LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG VEDPQAVIKWEKESHEATRELLKVKDRLIEVERNNATLQAEKAALRCQLKQLETQSSNLQ AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSKSAALMAQNAQLQSQQSSVEGERE GALKDKEELRSTYELLLRDHEKLAALHERQASEYEALIGKHGGLKSSHKSLEQQHRDLED RYKQLLQRKGDLEDLEKNLKEQREKMALENQTHQSTADQYKLLKEDNDRLNNTYRQLVKD NENLQLDHKSVKSQLNSAKLDQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL EEENRHLLDQIQTLMLQNRTLLEQTMESKDLYHVEQRQYIDKLNELRRQKEKLEEKIMDQ YKFYDPSPPRRRGNWITLKMKKLIKPKSRERMRSLTLTPSRSESGDGFLMFPQDSQDSSS IGSGSNSLDDTLTQKRSTIKRLPFMRNRSKDKDKAKAIYRRSMSMNDLLQTMAVAGGPGA QWASSIDNLDGDEVGDAGMAGSRGRSGQRMKELAFSTNAIDCAALTLPSAGRSRAKHRLQ VKDIASCEDVAGTIDDPKSQACRPTSLHSKRTISSNSNNNSHLASPLEGKGTLNGSLSRP HSESSGEFSLSLDQEVWSSSGSSPIQQPSSSRSSHQSPLQLRRSLDPPTAAGSPQVTKMG SPAKEVLSLQQFLDEGIDPAESGSQENLTVDSPRLSTCSEHVQKELPSTKSRGILRSSSG KAAPVTSDRPPRAAGQPGRPTLRKAESTRVRGSVPVRSSLSTQSKATSVSGRLDLASSTL PRASRVISTAEGTTRRTSIHDLLSKDNRQPVSVDITPPAAPKAGVRSQPTPSEYHPNSTN LKGPLTTATPLPKSLSLPCHSLEDPDLSTLESFLGPSFTVESVFMDSIFSESVGKNLPFL SLNPTLVSNISGPPVTNKTNPPPIPNTISTQNQAAHGQSNGQMQSSPASLKENNESVDPS CVNNPDESLSPEDKQSLWYEYGCV NT seq 6015 nt NT seq  +upstreamnt  +downstreamnt atggaaagcgaggttttcagccctttgctggagcagtttatgctcacgcctctggtctgc tgggtgaagacagtcgggcaggcgacttttaccgatggcacccaattatcggaatatatt gaattagtggatgggatttacctcaacgagataatgcttgagataaatcctaaggccacg gtgcagaggaccaacaagaaggtgaacaatgaccccacactgcgcatccagaacctctct attctcatcaggcagattaaagactactatcaggagaccctccagcagctggtgatgatg cctttaccaaacgtgctgatactgggccgcaaccctctgtctgaacaaggtctggaggag atgaaaaaaatgttgctgctgctactaggctgcgcagtccagtgcgagaagaaggaagag tacattgagtgtatccagactctggactttgacaccaaagctgccatagcatcccacatc caagaggtgactcataatcaggagaacgtagtggacctgcagtggttggaaagtggggaa atgcctcctgaggacctggacagcctctccagaaacctggctttccacctcaaacggctg gtagatgacagggacacacagctggagactatcgtggagttaacccaggagagagactgt gtgcagctgtctccactggctccctgtccgacccagtctcccggtgactcccccagtatg aggaggaccgaaagccgacagcatctctctgtggagttggctgatgccaaggccaagatc agacgacttcgacaggaactagaggaaaagagtgagcagcttttggacaccaggcaggag cttgagaacatggaagtggagctgaagaggcttcagcaagagagctaccagttggtgtcg gacgctcgatcggcgagggcctaccgtgacgagctggacgcactcagagagaaagcgatc cgcgtggacaaactggagagcgagctgagccgatacaaggagagactccacgacatcgag ttctacaaggccagagtcgaggagttgaaggaggacaaccaggtcctgttggagactaag agcatgttggaggagcagctggatgcgagccggacccgctccgacaaactgcacctcctg gagaaagagagtctgcagatcaaatccaagatccatgacctggagatggagcgagacatg gaccgtaaacgtatggaggagctgatggaggagaaccttgtgcttgagatggcccagaaa cagagcatggacgagtccctgcacctcggctgggaactggagcaactatccaagacacca gaactgacggaagcccctcagaagtctctgggtgaggaggtgaatgagctgacctccagc cgtctgttgaagctggagaaagacaaccagaccctgctgaagaccgtggaggagctcaga ggagcagccagtcaggacactgtgaccaaactgacaaaagtcaaccaggaaaaccagaga ctgaaccagaaattggagcatttggggagtgaactgacagcagacagagaggcgctccgc agcgctgaatccctcagtactgacctgatgaaggagaaggctttactggagaagactctg gaaacactcagagaaaactctgagagacagctgaagggtctggagcaggagaacaagcac ctgagccagacggtgtcgtctctgcgccagcgctgccaggttggtgctgaggcccgggtc aaggatgtggagaaagagaaccgcgttctccacgagtccatctgcgaaacaaccgccaaa ctcaataagattgagtttgaaaggaagcagctacgtaaggagcttgaagtggtgaaggag aaaggtgagcgagctgaagagttggaggttctgatgcagaagctggaaagggacaacgag agtctgcagaagaaagtagccagtctgggaatcacctgtgaaaaggtgtcttctttggag aaggagaacatggatctggaagcagaaggccgtcgtctgaagaagaagctggacactctg aagaacatggccttccagctggaggctctggaaaaggagaactcccagctggagcatgaa aacctggaacttcggcgctcggctgagagtctgcgttcagcgggcgctaaggccgctcag ctggaagccgagaacagggagctggagagcgagaggagccagttgaagcgcagcctggaa ctgctcaaagcctcgtccaaaaagacagagagattagagatgagttaccagggcctagat acggagaaccagcggctgcagaaggcgttagagaacagcagcaagaagattcaacagttg gaggttgagctgcaagaggtggagactgagaatcaaaccctccaacgcaacctggaggag ctcaagatctccagtaaacgcctggagcagctggagcaggagaacaagattctggagcag gaaagctcccagctggagaaagacaagaaacacctggagaaggagaacaagcggctgagg cagcaggccgagatccgagactccaagctggacgacaacaaccagcggatctccaccttg gagaaggagaatcggaccatgggcaaggagatgatcttcttcagggactcctgcaccaga gtcaaagacctggagagagagaacaaggagctggtcaaactgagcaccatcgataagaag accctcaacacactcagagaggagcttgtgagtgagaagctgcggactcagcagatgaat aacgatctggacaaactgacccatgagttggagaagattggactgaacaaagaaaggctg ctgcatgacgagggctccagcgacaggtttaagctcctggaaacccaactggagtcgtct ctgaaatcatctttggagattaaagaggagaagatcgccgccctagaggccagactgcag gagtcctccaacctcaaccagcaactacgccaggagctcaagacggtgaagaaaaactac gaggcgctgcgtcagagggaggaggaggagaggatggtgcagagctcgccccctagaggg gtagaggaccctcaggctgtcattaaatgggagaaagagagtcatgaagccaccagagaa ctgctgaaagtcaaagacagactcattgaggtggagaggaataatgcaacgctgcaggct gagaaggctgcactgaggtgccagctcaaacaactggaaactcaaagctccaacctgcag gctcagattgtggccgtgcagcgacagactgcttctttacaggagaacaatacgacacta caaacgcagaacgccaagctgcaggtggagaactccacccttagctcgaagagtgcggcc ctcatggcccagaacgcccagttgcagagccagcagagcagcgtggagggcgagcgcgag ggggctctgaaggacaaggaggagctgaggtccacctacgagctgctcctccgcgatcac gagaagctggcggcgctccacgagagacaggcatccgagtatgaagccctgatcggaaag cacgggggcctgaagagctcccacaagagcctggagcagcagcacagggacctggaggac aggtacaagcagctcttacagaggaagggagacctggaggatctggagaaaaatctgaag gagcagagggaaaaaatggcgctggagaatcaaacgcaccaatccacagctgaccagtac aaactgctcaaagaagataatgataggctgaataatacctatcgtcagctggtgaaggac aatgagaatctccagctggatcataagagcgtgaagagccagctgaacagcgccaagctg gaccagaccaagctcgaggccgagttctctaaactgaaggagcagtaccagcagctggac atcacctccaccaagctcaccaatcagtgtgagttgttgagccagctaaaaggaaacctg gaggaggagaatcgccacctgttggaccagatccagactctgatgttacagaatcgcact ctgctggagcagaccatggagagcaaggacctgtaccatgtagagcaaagacaatacata gacaagctgaatgagctgaggagacagaaagagaagctggaggagaagatcatggaccag tacaagttctacgacccctcacctccacgcaggcgtggcaactggatcactttgaagatg aagaagttgatcaagccgaagagcagagagaggatgcgctctctaacgctgaccccctct cgctcagagtccggcgacggtttcctgatgtttccccaggacagccaggacagctcgtcc attggctccggctccaactcgctggatgacacgctcacacaaaagaggagcactataaaa aggttgcctttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccgg cgctccatgtccatgaatgacctgctgcagaccatggcggtggcgggcggccccggagct cagtgggcgagcagcattgataacctcgacggcgatgaggtcggagatgccggcatggcg gggagccggggccgcagcgggcagcgcatgaaggagctcgccttttccaccaacgccatc gactgtgccgctctcaccctgccttctgccgggcgtagcagggccaagcaccggcttcag gtcaaagatatagcctcctgtgaagatgttgctggcaccatcgatgaccccaagagtcaa gcctgcagacccaccagtctccatagcaaaaggaccatcagtagtaatagtaacaataac tcccacctcgcttctcctctggagggcaaaggcacgttgaacggcagcctcagccggcct cacagtgagagcagcggagagttcagcctgagtttggaccaggaggtctggtccagcagc ggcagcagccccatccagcagcccagctcctcgcgctcctcccaccagagccccctgcag ctgcgcaggtcgctcgacccgcccaccgccgcaggcagcccccaggtcacgaagatggga tccccagccaaggaggtgctttccctgcagcagttcctggatgagggtattgatcctgca gagtctggcagtcaggagaacctcactgtcgactctcctcgcctctccacctgttctgag catgtgcagaaggaactcccttccacaaagagccgaggcatactgcgctcatccagtggg aaagcagcgccggtcacctccgaccgcccaccgagagccgccggacaaccgggtcgcccc accctccgtaaggcggagagcacccgtgtgagaggctccgtcccggtccgctccagcctc tcgacgcagagcaaagccacgtctgtgtccggacgcctggacctggcctcctccacgctg cctcgggccagcagagtcatctccaccgccgagggcaccacgcgccgcaccagcatccac gacctgctctccaaggacaaccggcagccggtatccgtcgacattactcctcctgctgcc cccaaggctggggtacgctcccagcccacacccagtgagtaccaccccaacagcaccaac ctaaagggacccctcaccaccgccacccctctgcccaagtcactcagcttaccttgccat agcttggaggaccccgacctctccaccctcgagtctttcctcggcccgtccttcactgta gagtcggtgttcatggactccatctttagtgagtcggtgggcaaaaacctccccttcctg tctctaaaccccacccttgtcagcaacatcagtgggcctcctgttacaaataaaacaaac cctcctcctatccccaacactatttccacccaaaaccaggctgctcacggccaatcaaat ggccagatgcagtccagcccagccagccttaaagagaataacgagagcgttgatccaagc tgtgtgaataatcctgacgagtcactgagcccagaggacaaacagtccctgtggtacgag tacgggtgtgtgtga

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