Anoplopoma fimbria (sablefish): 129091986
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Entry
129091986 CDS
T09102
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129091986 (btaf1)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129091986 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
ARM_ECM29
TACC_C
Motif
Other DBs
NCBI-GeneID:
129091986
NCBI-ProteinID:
XP_054455690
LinkDB
All DBs
Position
6:complement(23930875..23953167)
Genome browser
AA seq
1855 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVRNIPEWDPSPKPKEESKEDLSPEDSSCDRLSFYHFDISRLLKHGASLLGS
AGAEFEMQDDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDDSCTTS
GITAHGSKTAAGSSSRNHVPIQAADLIDAEFRPGMSSRQKNKAKRMAKLVAKQRSRDTDP
NEKSNDSFEGEPEEKRRKTTNVVIDQPATENKVLIDNVPDNSSLLEEIQEWPLESFCEEL
CNDLFNPSWEIRHGAGTGLREIIKSHGSGGGKLVGSTAEQMLRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMTETGVSMTVDVLLKLLKEDQWEVRHGGL
LGIKYALAVRQDLISVLLPRVLPAITVGLQDLDDDVRAVAAASLIPVVDGLVQLLPNKVP
FIVNTLWDSLLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLFTLLSKADESCAMWINPILQEMLRHIFQSCILESNEEILELIQKVWMEL
LSQAPQQYVVAASCPWMGAWLCLMMQASHMPIDINMLLEVKARCKDKAGSKARQGTIQVK
ETVQEYMAGAETVTDDPLTRDYVVVRSRLMAAKLLGALCRCICDPQLNAASQEIRPAESL
GHLLLFHLNSKSALQRIAVALVLCEWAAMQKDCQVVSSMVQPRLLAILSEHLYYDEIAIP
FTRMQNECKQLIALLADANIDLQDRLNCSVFTIDQANELVTGIFTESTAGLSVKSSQWQA
LDSKRQQAQATVTETNTEWQQLHLRVHMVTACAVINLQVLPEKLNPLVRPLMETIKREEN
TLIQGYAASFIAKLLQQCAGRSPCPNPKIIKNLCASACVDSAVTPSSACPVPPTQENAKG
SGLEKDCTHHLVNKTRGIITLYRHQRAAFAITSKRGPAPKALKTPTTELPPGSTICTDND
ESKKPFLIQRRGAEFSLTTVARHFGADFTKSLPYLWENTIGPLRTAVTENQRIDRQVQLE
RGDTAAQELVNSLQVLEVMAGAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMAARCVGVL
SKIAMLETMNSFLECVLPWLAAIEDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPVLG
RMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQLLDGRKL
ENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRV
QEYAKTKAADSSPLPSLVVCPPTLTGHWVDEVGKFCTKEFLNPLHYTGPPTERMRLQHQV
KKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRIILSG
TPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALH
RQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSISNTAT
AEEEEKPTLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRITEQLAGQSSSLRDLQHA
PKLSALKQLLLDCGLGGGGGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPCVT
YLRLDGSVPAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD
LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTIISQDNSSLQSMGTDQ
LLNLFSLDKGEKGEQSSSTSGKSSMKSVLDGLGELWDQQQYDTEYNLDSFMHSLQ
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcaagactcgatcgtttgtttatcttgcttgacaccggaacaacaccagta
accaggaaagcagcggcccagcagcttggagaagtggtcaagctccacccacatgaactc
aataacctcctatcaaaggtcttgacctacctaaggagtcccaactgggacactcgaata
gcagcaggccaagctgtagaggccattgtgaggaatattcctgagtgggacccatcgccc
aagcctaaagaagagtctaaagaagacttgtctccagaggactcctcttgtgaccggttg
agtttctaccactttgacatctctcgcctactgaaacatggggcctctctgctgggatcc
gcgggggccgagtttgagatgcaagatgacaaaactggtgagatggaccctaaggaacgt
ctggcccgccaaagaaagctccttcagaagaagctgggtctggacatgggcgctgctatc
ggcatggacacagaggagctgttcaacgatgaggacctggacgatagctgtacaaccagt
gggattacagcccatggaagcaaaacagcagctggatccagctcccgcaaccacgtgccc
attcaggccgctgacttgattgacgccgagttccggccaggcatgagcagtcgtcagaag
aataaggctaagaggatggccaagctagtggccaaacaaagatccagagacacggatcca
aatgaaaagagtaacgacagttttgagggggaacctgaagagaaacgaaggaaaaccaca
aatgttgtcattgaccaaccggcaacggagaataaagtcttaatagacaacgttccagac
aactccagtctgttagaggagatacaagagtggcctctggagagcttctgtgaggagctc
tgcaatgacctcttcaatccgtcatgggagattcgtcatggtgcaggcacaggtcttaga
gaaatcatcaagtcccatggttctggtggcgggaagctggtgggaagcaccgcagagcag
atgttgcggcagcatcaggagtggatagaggacctggtcatccggctgctctgcgtcttc
gctctggaccgctttggagactttgtttctgatgaggtggtggctcctgtcagggagacg
tgcgcccagacactcggtgtggccctacgccacatgaccgaaactggcgtttccatgaca
gtagacgtcctgctgaagctgctaaaagaagaccagtgggaggtccgtcatggcggcttg
ctcgggatcaagtatgccctggctgtccggcaggacctgatctctgtcttactgccccgg
gtgctccctgccatcactgtaggcctacaggacctagatgatgacgtcagggccgtggca
gccgcatccctcatcccggtggtggatggcttggtacagctactgcctaataaggtaccc
ttcatcgtgaacacgctatgggattctcttttggacctggacgacctcactgcctccacc
aacagcatcatgacattgctgtcctcgctactcacctacccgcaggtccgccagtgcagc
atgcagcagtcattaacagtcctggtccctcgggtttggccgttcttgagacacaccata
tcatcagtaagacgggcagctctggaaacccttttcactctgctctctaaagctgacgag
agctgtgcaatgtggatcaatcccatcctacaagagatgctgcggcacattttccaatcc
tgcatactggagagcaatgaagaaatccttgaactgattcaaaaggtgtggatggagctg
ctgtctcaggccccacagcagtacgtggtggcagccagctgtccatggatgggagcctgg
ctctgtctcatgatgcaggcctcacacatgcccatagacatcaacatgctactggaagtg
aaggcccgctgcaaggataaggctgggtcaaaggcacgtcaagggaccattcaggtgaag
gaaacggtccaggagtatatggcaggtgccgagacggtgacagatgacccactgacgagg
gactacgtagtggtccgttctcgcctcatggctgccaaattgctgggggctctgtgtagg
tgtatctgtgaccctcagctcaatgctgcatctcaggagatccgaccagctgagtcttta
ggccatctgttgctcttccacctgaactccaagtctgccctgcagcgcatagctgtggct
ctggtgctttgcgagtgggccgcaatgcagaaggattgtcaggtggtgtcatcgatggtt
cagcctcgtcttctggccattctgtcggagcatctgtactatgacgagatcgccatcccc
ttcacacgcatgcaaaatgagtgcaagcagctcattgcactgctggccgatgccaacata
gacctgcaagaccgcctcaattgtagcgttttcactatcgatcaagccaatgaactggta
accggcatcttcacagagtcaacagcgggtctgagcgtgaagtccagtcagtggcaggca
ctggacagtaaacgacagcaggcccaagcgacggtgacagagaccaacacagaatggcag
cagctgcatctgcgcgtccacatggtcacggcctgcgcagtgattaacctgcaggtgctt
cccgagaagctcaacccactggtcaggcctctgatggagaccatcaagcgggaggagaac
accctcatccagggatacgctgcgtcttttatagccaagctgctgcagcagtgtgccggc
cgctcgccgtgccccaaccccaagatcattaaaaacctctgtgcctcggcctgcgtggac
tccgcggtcaccccctcatctgcctgccccgtaccccccacacaggaaaatgccaaaggc
agtggtttggagaaagattgcactcatcacctggtcaacaaaacccgaggcataatcaca
ctgtaccgccaccaaagggcagcgtttgccatcaccagtaagagggggccagcccctaaa
gccctgaaaacccccaccacagagcttcctcctggcagcacaatctgcactgataacgat
gagagcaagaagccgtttcttattcagagacgaggggcagagttctccctgacaactgtt
gccaggcacttcggcgcagacttcaccaagtctctgccatacttatgggagaacacaatt
ggaccactgaggacagcagtgactgaaaatcaacgcattgacaggcaggtccagctggag
aggggagacactgcagctcaggaactggtcaactctctacaagtgctggaagtcatggct
ggggccatggctgccgaactcaaacctttgctgttggagcacctaccccatctgttcacc
tgcctgcagcacccgtacacagcggtgcgtcacatggcagcacgctgtgtgggtgtgctc
agtaagatagccatgctggagaccatgaacagtttccttgagtgtgtcctcccctggtta
gcagccatcgaagactgcaccaaacaggagggtgccatcgaggctttagcctgtgtcatg
gagcagctcgatgtggacattgtgccctacattgtgctgctcgtagtcccggtgttgggc
cgtatgagtgaccccagcgatagcattcgtttcatggccacacagtgttttgccactctc
atccgcctgttgccccttgaggctggtataccagaccctccggccatgtcagctgacctg
atccgccagaaggccagggaacgccacttcctggagcaactactagatggtagaaaattg
gagaactacaagatccctgttcccattaaggctgagctcaggaagtaccagcaggatgga
gtgaactggctgtccttcctgaacaaatacaagctgcacgggatcctgtgtgacgacatg
ggcctcggcaagacactgcagtccatctgcattctggcaggagatcactacctcagggta
caggaatatgccaagactaaagccgcagacagcagccccctgccctctctggtggtgtgt
cctcccacactgactggccactgggtggacgaagtgggcaaattctgcaccaaagaattc
ctcaacccactgcactacactgggcctcctacagaacgaatgcggctgcagcaccaagtg
aaaaaacacaacctcgtagtagcctcttacgatgttgtacggaatgacatcgactttttt
aggaatatcaaatttaattactgcatcctcgatgagggtcatgtcatcaagaacgggaaa
accaaactctccaaagccattaagcagttggctgccaacttccgaatcatcttgtcagga
acgcccattcagaacaatgtcctggagctctggtcattgtttgacttcctcatgccgggc
ttccttggaacagaacggcagtttgccgctcgctacggtaaaccgatcctggccagccgg
gacgccaaaagttcctcacgggaacaggaggcaggtgtcctggcgatggaggccctacat
cggcaggtgctacccttccttctgaggaggatgaaggaggatgtcctccaggaccttcct
cctaaaataattcaggactattactgcaacctgagtcctctacaggttcagttatatgaa
gactttgcaaagtctcgagccaaggccagcgtggaggacagcatctctaataccgctaca
gcagaggaggaggagaagcctacactgaaggccacaggccatgtcttccaagcgctgcag
tacctgaggaagctgtgtaaccacccgagcttggtcttgaccccgcagcatcccgagtac
aaacgcatcactgagcagctcgcgggtcaaagctccagcctgcgggaccttcagcatgcg
cccaaactctccgctctcaaacagttgctgttggactgtggtctaggaggcggtggagga
tcagaggggggcaccgaggcagtcgtggcccagcatcgggtgctcattttctgtcagctc
aagagtatgctggatattgtggaacacgatctgctgaaacccaaactgccgtgcgtcacc
tacctgaggctggacggcagcgtgccggccggcctgcgtcactccatcgtttccaggttt
aacaatgacccatccatcgacgtgcttctgctgaccacccatgtcgggggtctaggtctg
aacctgacgggtgcggataccgtggtgtttgtggaacatgactggaaccccatgagggac
cttcaggccatggatcgtgcccataggataggacagaaacgtgtggtgaacgtgtacagg
ctgatcacaaggggcacactggaggagaagatcatgggtctgcagaagttcaagatgagc
atcgccaacaccatcatcagccaagacaactccagcctgcagagcatgggcacagaccag
ctcctcaacctcttcagtctcgacaagggtgagaagggtgagcagtcgtcgtcgacctca
gggaagtcctccatgaagtctgtgctggacggcctgggggagttatgggaccagcagcag
tacgacacggagtacaacctggacagcttcatgcactccctgcagtag
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