Anoplopoma fimbria (sablefish): 129092007
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Entry
129092007 CDS
T09102
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129092007
Membrane trafficking [BR:
afb04131
]
Protein recycling
Others
Others
129092007
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
129092007
NCBI-ProteinID:
XP_054455725
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Position
6:10878233..10919318
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AA seq
1242 aa
AA seq
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METRLGHCLFIIFSKWIWLFTLTSILGGTDAELRCIPSCQQPIIKAVPRGPSELDFTHFG
EAPTHEFVGIKDRSPGAKPTAGGDETHNAAESTTSEESSSKVQGNNASCLQKDALNGQPK
VSVPKRAAASSPSESTATQNSTGDVQHTNDGNGNGVDETVGLNDEDADVASWRRARSARS
AETWSEFSHEDGEYASFSDQEEFELPSSTFALTGDTAHNQAMVHWSGQNSSVILMLTKYY
DFNSGRVTESSLWRSTDYGTTYEKLNEKVGLKTILSYLYVSPNNKRKIMLLTDPEVESSL
LISLDEGATYQKHSLAFDILSLLFHPEQEDWILAYSHEQKLYVSVEFGKRWQLVHDGVIP
NRFYWSRMGLDKEQGMIHLEISVSDGRSQYITCKLQNCSDGNKGKPFPGFIIPNSLVVQD
EYVFIQVPVGGQSVHYVSYKRNAFYPMKLPKYTLPKDLQIISTDDNQVVAAIQDWHQNDS
YNLYMSESRGLFFTLMLENAVSSGGPEGNIMIDLYEVAGIKGVFLSNKVVENQVKTYITY
NKGRDWRLLQAPTTDLQGNKVYCEQPYCSLHLHLHVSENPYTSGNIVSKDSAPGIIIASG
VVGPELTSNNVSIFITSDAGNSWREVFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLSFD
EGRNWDKYSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKTDFRSIFQQRCTS
EDYMTWQLHNEGEVCIMGMKRIFQKPKANARCVKARNQYISQMSDSCPCTEADFECDYGF
ERQIDGSCAPAFWFVPTVTSRDCIAGDSFLNTTGYRRASSNNCTEGTLSKYSPRRQKCPS
QAPRGLQLLTSEGTLVATLERNVTFLVFLEEGLSSMTSVTVDFGDGTAISYVNISSIDDG
VKHIYSKVGIYKVSATATNALGFDRVVLYLHVSCQLEQVQLSAPSVVVKNKAVNLTTVLR
PSSVGTVSYYWWFDNKTEPGVTLDGTMSFTFSKEGSHTVTVQASVGNTVRQDQITLAVYD
YFRSHVLGFSSNLDELNPGVSEWREDISRVVKSNMVQVTGINEKQLLVTVLPGLPTTAEV
FIVPGKRPRDGDMDEKWAHLDQLSQVLLSALNQDLIQFTLKPGVQVNVYATQLSPAPLVD
SSDSGHSGTAVIMLVSVVLMGLAVFVIYKFKRKIPGINTYTAEQPDKEQEVIPTVTSIVI
PNPEGDKLTSLDHVDVQLDSKGRGYLPSHTDIKLSDEAPHVF
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgcctcggtcactgcctttttatcattttctctaagtggatttggctcttc
accctaacttccatcctgggcggaacagacgcggagctaaggtgcattccctcgtgccag
cagccgatcattaaagctgttccccgcggaccctcggagctggatttcactcattttggc
gaggcaccaactcatgaatttgttggaattaaggatcgttcaccgggcgccaaacccacc
gccggaggagacgaaacgcacaacgctgcagaatcaacgacgagcgaagaaagttcgtcc
aaagtgcaggggaataacgcaagttgtctccagaaggacgcgttgaacggtcagccaaaa
gtttccgtgccgaaacgcgcggctgcctcttctcccagtgagagtaccgcgacccaaaac
agcaccggagatgtccaacataccaacgatgggaatgggaatggggttgatgagacagta
ggcctgaacgatgaggatgccgatgtggccagctggagacgagcacggagtgcgaggagc
gcagagacctggtcggaattcagccatgaggatggggagtacgcttcgttttcggaccag
gaggagtttgagctcccaagttcgacatttgcactcaccggggacactgctcacaaccag
gcgatggtgcactggtccggacaaaacagcagtgtgatcctcatgttgacaaagtactat
gacttcaactctggcagagtaacagagagttctttatggaggtcaactgattatgggacc
acatatgagaagcttaatgagaaagtcggactaaaaaccatcctgagctacttgtacgtg
agtccgaacaacaaaaggaagatcatgttacttaccgacccggaggtggagagcagcctg
ctcattagccttgacgagggggcgacctatcagaagcacagcttagcctttgatatcctc
agcctgcttttccaccccgagcaggaggactggatcctggcttacagccacgagcaaaaa
ctctatgtctctgttgaatttgggaagagatggcagcttgtgcacgacggcgtcatccca
aacagattctactggtccagaatgggtttagacaaagagcaaggaatgattcacctggag
atcagcgtgtctgatggacggtcacagtacatcacttgtaaacttcagaattgctctgat
ggaaacaagggcaagcctttccctggatttatcatccctaattccctggtggttcaggat
gaatacgttttcatccaggtgccagtaggtggtcagtctgtccattatgtgtcctataaa
agaaatgctttctacccaatgaagcttcccaaatacactctgccaaaggacttgcagata
atcagcacagatgacaaccaggtggtggcagcgattcaggactggcaccagaatgactcc
tacaacctgtacatgtctgagtccagagggctgttcttcaccctgatgctggagaacgcc
gtgagcagtggaggaccggagggcaacattatgatagacctctatgaggttgctgggatt
aagggggtgttcctgtcaaataaagttgttgagaaccaagtgaaaacttatatcacatac
aacaaggggagagactggcgtcttctccaggctccaacaaccgatctccagggaaacaag
gtctattgtgaacaaccttactgttctttacatctacaccttcatgtgtcagagaatcct
tacacctcgggaaacattgtcagcaaagattcagctccaggaattataatagcatcaggt
gtggttggacctgagctgaccagtaataatgtcagtattttcatcacatctgatgctggg
aacagctggagagaggtttttcaggaagagtacagcgtgtttttcctgaatcaaggagga
tctctggtggccatccgacacacacctctgccaattagacacatttggctgagttttgat
gagggcagaaactgggacaaatacagcttcacctcctctccgctctatgttgatggggtg
ctgggagagcctggagaggacaccctcataatgacaatattcggtcatttcagtcatcga
tctgagtggcaacttgtcaaaactgacttccggtccattttccaacaacgatgcacatct
gaagattacatgacatggcagttacacaatgagggcgaagtgtgcatcatgggaatgaag
agaatcttccaaaaaccaaaagcaaacgctcgatgtgtcaaggccagaaatcagtatatt
tcccagatgtcagattcctgcccatgcacagaggcagattttgagtgtgactacgggttt
gagaggcagattgatgggagctgtgctccggctttctggttcgttcctacagtaacatcc
agagactgcatcgcgggggacagcttcctcaacaccacaggatatcgccgggcttcgtct
aacaactgcactgagggaacactgtcgaagtacagccccaggcgacaaaagtgtcccagt
caggcccccaggggcctccagctcctcaccagtgagggaacactggtagcaaccctggag
aggaatgtcactttcttggtctttctggaagagggtctcagctccatgacaagtgtaacg
gtggactttggcgacggcacggcgatatcttatgttaacataagctccatcgatgacggg
gtcaagcatatctacagtaaagttggcatctacaaagtttctgctacagcaaccaacgct
ctgggctttgacagggtggtactctatctccatgtctcctgtcaacttgaacaggtccag
ctctcggctccttcagtggtcgtcaagaacaaagcagtaaacctcacgacagtgttacgc
cccagcagtgtgggaacagtgagctattactggtggtttgataacaaaacagagcctggt
gtgactctggatggaacgatgtccttcactttctccaaggagggaagtcacactgtcact
gttcaggcttcagttggcaatactgtccgtcaggaccaaattactttggctgtttacgat
tattttcggtcacatgttttgggcttttcttctaatttggacgagctgaaccccggggtg
tctgagtggagagaggacatcagccgagtggtgaagagtaacatggttcaggtcacagga
ataaacgagaagcagctcctggtcacagtgctcccaggtttacctacaacagcagaggtt
ttcatcgtgcccgggaagaggccaagagacggggacatggatgaaaagtgggcgcacctg
gatcagctttctcaggttctgctaagtgctttgaaccaagaccttatccagttcacactc
aaaccgggggtgcaagtgaacgtgtacgccacgcagctgtctccagctcctcttgtggac
agcagtgatagtggccacagtggaactgcagtcatcatgctcgtgtcagtcgtgctgatg
ggcttggctgtctttgttatatataaattcaaaaggaagatcccaggcatcaacacatac
acagcagagcagcctgacaaagaacaagaggtcatcccgacagtgacctccatagtcatc
ccaaaccctgagggggacaagctgacctcgctggatcatgtggatgtacagttggactca
aaaggcagaggctacctgccatctcacactgacatcaagctctcggatgaagcgccccat
gtgttttaa
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