Anoplopoma fimbria (sablefish): 129092058
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Entry
129092058 CDS
T09102
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03015
mRNA surveillance pathway
afb04261
Adrenergic signaling in cardiomyocytes
afb04382
Cornified envelope formation
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129092058 (ppp2r2d)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129092058 (ppp2r2d)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129092058 (ppp2r2d)
09158 Development and regeneration
04382 Cornified envelope formation
129092058 (ppp2r2d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129092058 (ppp2r2d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129092058 (ppp2r2d)
03036 Chromosome and associated proteins [BR:
afb03036
]
129092058 (ppp2r2d)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129092058 (ppp2r2d)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129092058 (ppp2r2d)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129092058 (ppp2r2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_Gbeta
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
129092058
NCBI-ProteinID:
XP_054455803
LinkDB
All DBs
Position
6:10797137..10802144
Genome browser
AA seq
461 aa
AA seq
DB search
MAGKLLLKAGRGPTSLGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATG
DKGGRVVIFQHEQESKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQN
AAHFLLSTNDKTIKLWKISERDKRAEGYNLKDEDGRFRDPFRITSLRVPVLMPMDLMVEA
SPRRIFANAHTYHINSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELT
EVITAAECHPLQCNVFVYSSSKGTIRLCDMRAAALCDRHSKFFEEPEDPSSRSFFSEIIS
SISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKF
ECCWNGSDSAIMTGSYNNFFRMFDRNTRRDITLEASRESSKPRATLKPRKVSTGGKRKKD
EISVDSLDFNKKILHTAWHPKDNVIAVAATNNLYIFQDKIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaagctactcctgaaggcgggcagaggacccacctcactcggagttgcaggt
ggaaatgattttcagtggtgtttctctcaagtgaaaggagcgatagatgaagatgttgcg
gaagctgacataatctcaacagttgagttcaactattctggagagttgcttgcaactgga
gataaaggaggcagagtagtgatatttcaacatgaacaggagtctaagaatcgtccacat
ctgcgcggggagtacaacgtctatagcacttttcagagtcacgagccagaatttgactat
ttgaaaagtttagaaattgaggaaaaaattaataaaataagatggctaccccaacaaaat
gctgctcactttctactttcgacaaatgataaaactatcaaattgtggaaaataagtgaa
cgagataaaagagcagaaggttacaacctgaaagatgaagatggacgattccgagacccc
tttagaatcacctctttacgggtaccagtactgatgccaatggatctcatggtagaagca
agcccgcggaggatctttgcaaatgcgcacacctatcacattaattccatttctgtaaat
agtgatcatgaaacgtacctctccgcagatgacctaagaataaatctatggcacttggaa
atcacagacagaagttttaatattgtagacatcaagcccgccaacatggaggaactgaca
gaagtaatcacagctgctgagtgccatccactccaatgcaatgtatttgtgtacagcagt
agcaaaggcaccatccgcctgtgcgacatgcgagcagcggcactctgcgataggcactca
aagttctttgaggagcctgaggatccaagcagccgatcttttttctctgagatcatctcc
tccatctcggacgtgaagttcagtcacagcggacgctatatgatgacacgtgactacctc
tccgtcaaagtttgggacctcaacatggagaacaggccagtggagacgtatcaggtccat
gaataccttcgcagtaaactgtgctccttgtatgaaaacgactgcatctttgacaagttt
gagtgctgctggaatggcagtgacagtgccatcatgaccggctcctacaacaacttcttc
cgaatgttcgaccgcaacaccaggcgggacatcacactggaggcgtcccgggagagcagc
aaaccacgggctacgctcaaaccgcgcaaagtgtccaccggtggcaagaggaagaaggac
gagatcagcgtggacagcctggacttcaacaagaagatcctccacactgcctggcacccc
aaagataacgtgatagccgtggcagccaccaacaacttgtacattttccaggacaaaatc
aactag
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