Anoplopoma fimbria (sablefish): 129092060
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Entry
129092060 CDS
T09102
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129092060 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129092060 (nvl)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129092060 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_14
AAA_22
NPHP3_N
TIP49
AAA_33
Mg_chelatase
RNA_helicase
AAA_28
nSTAND3
AAA_17
Vps4_C
AAA_18
ATPase
Rad17
TsaE
NACHT
ABC_tran
Viral_helicase1
AAA_3
Zeta_toxin
nSTAND_NTPase5
IstB_IS21
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
129092060
NCBI-ProteinID:
XP_054455807
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All DBs
Position
6:complement(25020786..25041629)
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AA seq
863 aa
AA seq
DB search
MKKRSGGCLDSRLKPRVEQYMTTCTSEYVDLSAMALELQKLYRMEYGRRNKTAFRIQVEK
VYDAIMKDSGLNDHESKHLTKRAKHSHNDSDDGSSLETSSDSGDHILENTPTNHMNSSLT
SLYRKGHPDSNNCSPRRDEPAASCPASTVNLPPSSGTLISNGGWFIDRGRGPEKSTILID
LCEEQPTETATNQTDVSLLEPQKSHTKSKKRMKISTETTESRILNKKAKSKSPELQYPTL
KFEDVGGNEETLMEVCKLLIHMRHPEVYQQLGMVPPRGFLLHGPPGCGKTLLAQAVAGEL
QLPLLKVSAPELVSGVSGESEQKLRELFDLAVNSAPCILFIDEIDSITPKREVASKDMER
RIVAQLLTCMDDLNSLTVTAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAARLR
ILKTLCRKLKLQEDFDYQQLARLTPGYVGADLMALCREAAMSAVSRVLLEIRGRSQSQSS
TKELLTGGVQTEAVVTEGEFREQQGADINPVPQEELGQSHLQGDLWHLLQLLKNTATLSE
EELAGLSILMSDFLASLASVQPSAKREGFATVPDVTWEDVGALQDIREDLTMAILAPVRS
PEQFRALGLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAV
RQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLESRRQVFIMAA
TNRPDIIDPAILRPGRLDKTLYVGLPPQADRHAILLTITKGGTKPQLEQDVCLEEIAFDE
RCDCFSGADLTALVREASINALRAYLKSQPSQAYSHGHTLSSGSVADIRVSKQNFDDAFK
KVRPSVSKKEQKMYEQLRESLSR
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagaagtggcggctgtctggacagtcggctcaaaccgagagtggagcagtat
atgacgacctgcaccagtgaatatgtagacctttccgccatggccctggaacttcaaaaa
ctgtacagaatggagtatggaaggagaaacaagacagctttcaggattcaagtagagaaa
gtgtatgacgcaatcatgaaggactccgggctgaatgatcatgagagcaaacacttgact
aagagagccaagcacagccacaatgacagtgatgatggtagcagcttagaaacgtcctct
gacagcggtgaccacattctggagaacactcccaccaaccacatgaacagctctcttaca
tctctgtaccggaagggacaccctgactccaacaactgctcacctaggagagatgaacct
gctgccagctgtcctgcaagcacagtcaacctccctcctagttcagggacgctgatttcc
aatggaggctggttcattgatagaggcagagggccagagaagagcacaatccttattgac
ctgtgtgaagagcagccaactgaaacagcaacaaatcagacagatgtgtccctgctagag
cctcagaaatctcacacaaagtccaaaaaaaggatgaagatatcaactgaaactacagag
tctcgaatcctgaataagaaagcaaaatcaaagtcaccagagctgcagtatcccactctg
aagtttgaagatgttggaggtaatgaagagacgttaatggaggtgtgtaagctgctgatc
cacatgcgtcacccagaggtgtaccagcaactgggaatggttcctccaaggggcttcctc
ctacatggacctcctggctgtggaaagacgctgctggcccaggctgtggctggggagctg
cagctgcccttgttgaaggtgtctgctccggagctggtatctggagtgtcaggagagtct
gaacagaagctcagagagctgtttgacctggctgtgaactctgccccatgtattctgttc
atagatgaaatagattccatcacccctaagagagaggtggcttctaaagacatggagagg
aggattgtagcccagctcctaacttgcatggatgacttgaacagtctgacggtgacagct
caggtcctggtcatcggtgccaccaacaggccagactccctagaccctgccctccgcaga
gctggacgattcgacagagagatctgccttggtatccctgatgaagcagctcgtctcagg
atcttgaagacgttatgtcgaaaactgaagctgcaggaggactttgactaccagcagctg
gcccggctcaccccaggctacgtgggcgcagaccttatggctctgtgccgcgaagctgcc
atgagtgctgtaagcagggttctgctggaaataagaggacggagccaaagccagagttct
actaaagagctattaacaggcggagttcagactgaagctgttgtaacagaaggagagttc
agagagcaacagggagcagacatcaacccagtacctcaagaagagttgggacagagtcac
ctgcagggagatctgtggcacctgctgcaattgttaaagaacactgcaacactatcagag
gaagagcttgctggcttgtccatcctcatgtcagacttcctggcctctctggccagtgtc
cagccctcagccaagagggagggctttgccaccgtgcctgatgtcacctgggaggatgtt
ggagccctgcaggacatcagagaggacctcactatggccatattggctccagtgcgttct
ccagagcagttcagggctctggggctcagtgctccatctggtgtgcttctggctggacct
ccaggatgtggaaaaacactgctggccaaggcagtggccaatgagtcaggccttaacttc
atctctgtcaagggtccagagctgctcaacatgtacgtgggagagagtgagcgggctgtc
agacaggtctttcagagaggacgcaactcggctccttgtgtcatattctttgacgagatt
gatgctctgtgtcctcgccgctcaggccatgagtcaggagccagtgtgcgggtggtcaac
cagctgctgacagagatggatggcttagagtctcgacggcaggtcttcatcatggctgca
accaacagaccagatatcatcgaccctgccatactgaggccaggtcgtctggataaaacc
ttgtatgtaggtctgccacctcaagcagaccgccatgccatcctgctcaccattactaag
ggtgggaccaaacctcagctggagcaggatgtctgtctggaagagattgccttcgatgag
cgatgtgattgcttcagtggagctgacctgactgcgttagtgagagaagcatctattaat
gccctgagggcctacctgaagtctcagccttcccaagcttattctcatggtcacacatta
tcttctggctcagtagctgacattagagtaagcaagcagaactttgatgatgccttcaag
aaagttcgtccatctgtgtccaaaaaggagcagaagatgtacgagcagctcagagaatcc
ctcagcagataa
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