Anoplopoma fimbria (sablefish): 129092062
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Entry
129092062 CDS
T09102
Symbol
cpeb3
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 3
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04114
Oocyte meiosis
afb04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
129092062 (cpeb3)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
129092062 (cpeb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129092062 (cpeb3)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129092062 (cpeb3)
Factors involved in mRNA localization
Trans-acting binding proteins
129092062 (cpeb3)
mRNA cycle factors
P-body specific factors
129092062 (cpeb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
zf-B_box
Motif
Other DBs
NCBI-GeneID:
129092062
NCBI-ProteinID:
XP_054455811
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All DBs
Position
6:23890308..23925704
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AA seq
658 aa
AA seq
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MQDDLLMDKNKAQAHHQQDPTQVDPPPSTSTSTSTPTPSSEPTSSSSESESPLTGSNQAA
SVLGSSGSSRDTVPMESPVLPGLSFHHQETGGPVSSSSPSSSFGSTWSTGTTSAVDDSFF
QGIPSVNGTMLFQNFPHHVNPVFGGNYSPQMGLAPQTQQHQPQAQQQQQQRRSPVSPNQG
PFPQRNAYQTIMNNSKGSSSSSSSSSASSSAWNNHQNAAWSTASNPWSGLQAGRDPRRAV
GVGVAVGVGVPSPLNPISPMKSXYSSNVIAPPKFPRPGPLAPKPWMDDSAFRTDNTNNIL
PFQDRNRPFDAFSLHSLENSLMDMIRTDHDKGRMGLNFHHPGAEHIMPLNTRSYGRRRGR
SCLFPFEDGFLDDGHGDPSLTPGLNSPTRCQNGERMERYSRKVFVGGLPPDIDEDEITNS
FRRYGHLVVDWPHKAESKSYFPPKGYAFLLFQEETSVQALIDACIEEDGKLYLCVSSPTI
KDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAG
IDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQ
GARCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGGRPRHVSFRWS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgatttactgatggacaaaaacaaagcccaggctcaccatcagcaagatccg
acgcaagtagaccctcctccctccacctccacctccacctccaccccgaccccgtcatcg
gagcccacgtcttcttcatccgagtcggagagcccgttgaccgggagcaaccaagcggcc
tcggtgctcggtagcagcggtagcagcagggacacggtaccgatggagtcgccggttctg
cccgggttgagcttccaccaccaggagaccggcggccccgtctcctcctcctcgccgtcc
tcctcttttgggagcacttggtccacaggaaccacaagcgccgtggacgacagctttttc
cagggaataccctccgtgaacgggacgatgcttttccagaacttcccccaccacgtcaac
ccggtgttcggggggaattactccccgcagatgggtctggctccacagacccaacagcat
caaccacaagcccagcagcagcagcagcagaggcggtcccctgtcagcccgaaccagggg
ccctttccccagagaaacgcttatcagaccatcatgaataacagcaaaggctcttcgtcg
tcatcgtcctcttcctctgcctcgtcgtccgcttggaataaccaccagaacgccgcctgg
agcacagcctccaacccctggagcgggctgcaggccggcagggacccacgcagagcggtc
ggggtcggggtcgcagtcggcgtcggggtgccgtcacccctgaaccccatctcccccatg
aaaagcncctattccagcaatgtcatagcaccccctaagttcccaagacctggtcccctt
gcccctaagccctggatggatgacagcgccttcaggactgacaacaccaacaacatcctg
cctttccaggaccggaatcggccctttgatgcttttagcttgcactctttggagaattcc
ttaatggatatgataaggactgaccatgacaaaggacgcatgggcctgaactttcatcat
cctggagcggagcacataatgccattgaacacccggagctatggccgcagaagaggtcgt
tcctgtctcttcccctttgaagacggtttcctcgacgacggtcacggtgacccctccttg
accccgggcctgaactcgcccacccgctgtcagaacggagagaggatggagcgctactcc
aggaaggtctttgtcggcggcctgccccctgacatagatgaagatgaaatcaccaacagt
ttccgtcgctatggacacctggtggttgactggccccacaaagctgagagcaagtcctac
ttcccacctaaaggctacgccttcctgctcttccaggaagagacttcggtccaggccttg
atcgacgcctgcatcgaggaagacggcaagctctacctgtgtgtttccagtcccaccatc
aaagacaaaccagtccagatccgtccctggaacctgagcgacagtgactttgtcatggac
ggctcccagcctctggacccccgcaagaccatctttgtagggggggtgccgcggcctctg
cgtgcagtggagctggctatgatcatggaccggctgtacggaggcgtttgctacgccggc
atcgacaccgacccggaactcaaatacccgaagggagccggccgcgtggccttctccaat
cagcagagctacatcgccgccatcagcgcccgcttcgttcagctgcagcacaacgacatc
gacaaaagggtggaggtgaagccgtacgtcctggacgaccagatgtgcgacgagtgccag
ggggctcgctgcggggggaagttcgcccccttcttctgtgccaacgtcacctgcctgcag
tactactgcgagtactgctgggccagcatccactcgcgggccggcagagagtttcacaag
ccactggtcaaggagggcggcggccgcccccgacacgtgtcgttccgctggagctga
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