Anoplopoma fimbria (sablefish): 129092069
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Entry
129092069 CDS
T09102
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129092069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129092069
03036 Chromosome and associated proteins [BR:
afb03036
]
129092069
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129092069
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
129092069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
HOOK_N
Motif
Other DBs
NCBI-GeneID:
129092069
NCBI-ProteinID:
XP_054455826
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Position
6:complement(12957259..12971527)
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AA seq
1220 aa
AA seq
DB search
MADQVSAMCDQLVTAVNVMMEAESGHIYRLEALKFCEEFKETSSFCVPCGLRLADKAQPA
VVRHFGLQILEHVIKFRWNNMQQQEKVQLKECAMQLLSTGTHPILEEESHIKDVLSRITV
EMIKREWPQHWPDMLKEMEALTSHGEAQTELVMLILLRLAEDVISFQTLPTQRRRDIQQT
LTQNMESIFSFMMAILHVNVEDYRKLNGSPGHELQARAHCRVAVATLNTLAGYIDWVSLV
HITSGNCHLLEMLCLLLSEPELQLEAAECLLIAISRKGKLEERKPFMLLFDDVAIDYILS
AAQSADGLAICKKSAESQAVEVVERRYVFLKRLCQVLCALGGQLCALVGSDVEVEVPANL
SKYTEAFLAFTTHSSQFLKSSTLATWGALFRHETLSKDPVVVEMAIKYLRASMTNLVKTG
FPSKNNNPSCEYSRVDFDSDEDFNSFLNSFRAQQGEVVRFACRIVPLEAFQIAADWLQYQ
IASPIDTGATTSKTAEGLCSLLSPSVVQWDAMTVFMECVVAQILKNMEEEKLPIDQSMEL
LQAVLNYNTKDPLILSCLLTNISSLFPFVKQRPPCLPPILYKLFNAITFEVGQDSKAPRT
RAVMNVRRHACSSIIKICRDYPQYILPCFDLFYNHVKKLFSTDATLSHMEKCSLMEALVL
ISNQFKDFAKQKAFLDELMASVVAEWTSAEMRQVLCDPAMFLSFVGADQVVNEQSRDADT
AGLNRGRLGFFLYAMIGVVKRARWPADLEEAKAGGFVMGYTAAGAPIYRNPCTAMFLLLL
PNLLALIRTNNSLFLPENMARLSETYSRAHEVMDADKNVVLGLSKHLLDIYDSPVYRTNL
ERMQGFFCTLYDNCFHVLGNAGVSLQQEFYTIERLSEEIAGSAFVSLDCVPDHRLRPMIR
VFVRQLVLSCPQEYYNSLLCPLLGPLFAYMQQRLNVKWQVINQRSSVNGEDDEEEVVCQE
SQVTQEMLEEQLVRLVSREILDLLSVSCITKKVPEPTANKEEMDEEDMMDSVQAASPAQP
TEELTELGKCLLKHESIYMNLLTLSFTSLSWKDTTYCHRTASMVCWTLLRQVIVGNLLPE
AVTWFYTSVLRGLQVHGQHEVCNTTLSQLAMLIYENLRPRYTELRLVMTQIPNISVDSLD
QYDHKLIDPNAQKLGEKKRKDQFKRLIAGTVGKALCQQFRKEVHIRNLPSLFKKPKPDKD
VQSGEALGLEALFSPENNTL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaggtgtccgccatgtgtgaccagcttgtcacagctgtgaatgtgatgatg
gaggcagaatcaggacacatttaccgactggaggccctgaagttttgtgaggagtttaaa
gagacgagctccttctgtgtcccatgtggcttacgactagccgacaaagcacagcccgct
gtggtgagacactttggtttgcaaatcctggagcacgtcatcaagtttcgatggaacaac
atgcaacaacaagagaaagtccagttgaaggagtgtgccatgcagctgttatcaactggt
actcatcctatcctggaggaggagagccacatcaaagatgtcctgtcacgaatcactgtg
gaaatgataaagagggaatggcctcagcattggccagatatgcttaaagagatggaggct
ctcactagccatggggaggcgcagacagagctggtgatgttgatcctgttgaggctggcg
gaggatgtgatctccttccagacgttgcccacccagcgacgcagagacatccagcagaca
ctcacccaaaacatggaaagcatcttcagcttcatgatggccattctgcatgttaatgtc
gaggactaccgtaaactgaatgggtcacccggacatgaactgcaggccagagctcactgt
cgagtcgcggtggctacgctgaatacactcgcaggctacatagactgggtgtctctggtg
cacatcactagcggaaactgtcatctactggagatgttgtgtttgctgctgagtgaaccc
gagctgcagctggaggcagcagagtgtctgctcatcgctatcagcaggaagggcaagctg
gaggagaggaagccattcatgctgctctttgatgatgtggccatcgactacatcctttct
gcagcccagtcagcagatggactggcaatatgtaagaaatccgctgaatcacaagcggtg
gaggtggtggagcggcgttacgtcttcctgaagaggctgtgtcaggtcctgtgtgctctg
ggaggccaactctgcgcattagtgggttcagatgtagaggtcgaggtacccgctaatctt
agcaagtacacagaagcgtttttagctttcactacacattccagtcagtttttaaagtcg
tctactctggccacttggggagctttgttcagacatgagactctgtcaaaggacccggtt
gttgtcgagatggccatcaaatacctcagagcgtctatgaccaacctagtcaagactgga
tttccatctaaaaacaacaacccaagttgcgagtactcccgtgtggactttgacagcgat
gaagacttcaattcgttcttaaattcttttcgagcgcagcagggagaggtcgtgaggttt
gcatgtcgcattgtccccctggaggctttccagatagcagcagactggttacagtatcag
attgccagccctattgatacgggggctacaacatctaagactgctgagggcctgtgctcc
ctcttatctccatcagtggtccagtgggatgcaatgaccgtcttcatggagtgtgtggtc
gcacagatcctcaaaaatatggaggaggagaagttgcccattgatcagagcatggagctg
ctgcaggccgtgctgaactacaacaccaaagacccgctcatcttgtcctgtttgctcacc
aacatctcgtccctcttcccatttgttaaacaaaggccgccctgcctgccaccgattcta
tacaagctgtttaatgccataacatttgaggttggacaggacagtaaggcacctcggacc
cgagctgtaatgaacgtgagaaggcacgcctgttcttccatcatcaaaatatgccgggac
tacccacagtacatcctgccttgttttgacttgttctacaatcacgttaagaagttgttc
tcaaccgacgccacgctctctcacatggagaaatgttcgctgatggaagctctggtgctc
atcagcaaccagttcaaagactttgcaaagcagaaggcttttctagatgaactgatggct
tcagtggttgcagaatggacctcggctgagatgaggcaggtgctgtgtgaccctgccatg
ttcctgtcctttgtcggtgctgatcaggtggtgaatgagcaaagtcgagacgcagacact
gcgggccttaataggggccggctgggttttttcttgtatgccatgattggagtggtcaag
cgggcacgctggcctgcagacctggaggaagccaaggccggtggctttgtgatgggctac
accgctgctggagctcccatctacagaaacccctgcactgccatgtttctgctcttgctg
ccaaacctgctggctctaatcaggactaacaacagtctgttcctgccagagaacatggct
cgtctgagtgagacttactccagggcccatgaggtgatggatgcggataaaaatgtggtt
cttggtctctctaagcatcttctggatatttatgactctcctgtgtatagaaccaacctg
gagcggatgcagggatttttctgcacattgtatgacaactgcttccatgtcctgggaaat
gcaggtgtgtccttgcagcaggaattctacaccatcgagaggttgagcgaagaaatagct
gggtctgcttttgtctccctcgactgtgtgcctgatcacagacttcgccccatgattcgg
gtgttcgtgaggcagttggtgctatcatgtcctcaggagtactacaacagtctactctgc
cccctgctaggacctctgttcgcctacatgcagcagagactcaacgtcaagtggcaggtc
atcaaccagaggagctctgtcaacggtgaggatgatgaggaggaggtggtgtgtcaggag
agccaggtgacgcaggagatgttggaggagcagctggtacgcctggtcagcagggagatc
ctggatcttctctctgtgagctgtattacaaaaaaagtgcctgaaccaacagcaaataag
gaggaaatggatgaggaagacatgatggattcagtgcaggcggcgtctcctgcccagccc
acagaggagctgactgagctgggaaaatgcctgttgaaacacgagagcatctatatgaac
ctgttgaccctctccttcacctctctatcatggaaggacaccacttactgtcaccgcact
gcttcaatggtctgctggacacttctgcggcaggtcatagtgggtaatcttcttcctgag
gcggtcacatggttctataccagtgtcctcagaggccttcaggttcatgggcagcatgag
gtctgcaacaccaccctctctcagctggcaatgctcatctatgaaaacctgcggcctcgc
tacactgaactgagactggtgatgacccagatcccaaacatcagtgtggactccctggac
cagtatgatcacaagctcattgaccccaatgcccagaagcttggagagaagaagaggaaa
gaccagttcaagaggctcattgcaggaacagttgggaaagctctgtgccagcagttcagg
aaggaggttcacatccggaatcttccatcgctcttcaaaaagccgaagccggacaaagac
gtgcagagcggtgaagcactgggcctggaagctctcttctccccggagaataataccctc
tag
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