Anoplopoma fimbria (sablefish): 129092088
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Entry
129092088 CDS
T09102
Symbol
nphp1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129092088 (nphp1)
Cilium and associated proteins [BR:
afb03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
129092088 (nphp1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
ANAPC15
Alanine_zipper
RXT2_N
NPV_P10
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
129092088
NCBI-ProteinID:
XP_054455860
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All DBs
Position
6:1232814..1244949
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AA seq
680 aa
AA seq
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MNMNSLQMPQRRRGALQTIHRDVDHVTQQVDRLQKDVQSQDASCEEACRRCQELQMCAEK
IQRTLMKLTKADELAPVGNYDQRKQEEETRLQNILERLNTLSLELSPPGPSSAAGDVSKE
DNEEDDEDEDSSDDSDAEGDEEDEKQTVKPDIYTALSDFRGEQEGDLSVQRGEVLRIIRR
TADGWWLAQDAKGNRGVVPKTYLKMGSGVDDEDDDDDDDDDDDDDDEDEQDGEDLTDGGE
KQSSVHANWSTVRKALTEIDATDVLSAMGAIPSGFRPSSLNKLLVEEGMTYRGSHYVQPE
LSQSQLSFSDLFLDPDTGRVRARQVRTCVCFSLWSCRMIPTPGVGVHVLSRHVRLCAFDG
TQVLSNIHTVRATYNSKSPKTWSFSPRMSGVLPALLDGDCFLRCSSTSPDLGILFELGVS
FIRNSTGERGDLSCGWAFLKLTDDSGNPLPNRTFELQVSGGTPYEKDVMMEASVTRGTPA
GVFQQMLQARRQPKLIVKLKSCNSRTRTQLSLLPDTLLHCLSCVHLLVLHRQLLADCLLM
DRPTMQNADLICSPVLSTFPELLDQPDLLDALRSAWLDAETNMSRARRRDLSFLKQEFIK
VYMSSVYFLLHSPSLPGHRWADPPSEEQRSRVIYATLDALKHTQNATGQPAGPEVLLDPT
HQHLAFDITELTFDLLRVAR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaacagccttcagatgccgcagagaagaagaggagctctgcagacaatacac
agagacgtagaccacgtcacacaacaggtggacaggctgcagaaggacgtgcagagtcag
gatgcatcctgtgaggaggcctgtcggagatgtcaagaactgcagatgtgtgcagagaag
atacaaaggacactgatgaaactgaccaaggcggatgagctggctccggtggggaactac
gaccagaggaagcaggaagaggagacacgactgcagaacatcctggagcgtttgaacacc
ctctctctggagctttcaccaccaggacccagctctgctgccggagatgtttcaaaggaa
gataacgaggaggacgatgaagacgaagacagcagcgacgacagtgatgctgaaggcgat
gaagaagatgagaagcaaactgtgaagcctgacatctacacagcgctcagtgacttcaga
ggagaacaggaaggagatctgtcagttcagagaggggaggtgttgaggatcatcaggagg
acagcagatggatggtggctcgctcaggacgcaaaaggcaacagaggagtggttccaaaa
acctacctgaagatgggctccggtgttgacgatgaagacgacgacgatgatgatgatgat
gatgatgatgatgatgacgaggacgaacaagatggtgaagatctgactgatggcggagag
aaacagagttctgtacatgccaactggagcaccgtgagaaaagctctgaccgagattgat
gctacagatgtgctctctgccatgggggctataccttcaggattcagaccgtcatctctc
aataaactgctggtggaggaaggtatgacgtacagagggagtcactatgttcagcctgag
ctcagccaatcacagctctcctttagcgacctcttcctggatccagacaccggcagggtt
cgagctcggcaggtcaggacttgtgtttgcttcagtttgtggagctgcaggatgattcca
actcccggggtcggagttcacgtcctcagccgacacgtccggctctgtgccttcgatgga
actcaggtgttgagtaacatccacacagtgagagcgacctacaactccaagagccccaaa
acctggagcttctctccacgaatgtccggagtcctaccggccctcctagacggagactgt
ttcctccgctgcagctccacctctcctgacctcggcatcctgtttgaactgggagtctcc
ttcatacgcaattccacaggtgagagaggagacctgagctgtggctgggctttcctcaaa
ctgaccgacgactctggaaaccctctgcccaacaggacctttgagctgcaggtgagcggg
gggactccctatgagaaggatgtgatgatggaggcttcagtcaccagaggaactccagcc
ggtgtcttccagcagatgcttcaggccagacgtcagcccaaactgatcgtgaagttgaaa
tcatgcaacagccggacgaggacgcagctcagcctccttcccgacactctgcttcactgt
ctgagctgcgtccacctgctggttctgcacagacagctgctggccgactgtctgctgatg
gaccggccgaccatgcagaacgcagatctgatctgcagtcctgttctctccaccttccct
gagctgttggaccagccggacctgctggatgctctcaggagtgcctggctggacgctgag
accaacatgagccgagcacggaggagagacttgtctttcctgaaacaggagtttatcaaa
gtctacatgtcgtccgtttacttcctgctccactcgccctcgctgcccggtcaccgctgg
gccgacccgccctcagaggagcagcggtccagagtcatctacgccacgctggacgccctc
aaacacactcagaacgccaccggacagcctgcaggacccgaggtgttactggaccccacg
catcagcatctggcctttgatatcacagagttgacctttgacctcctccgagtggctcgg
tag
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