Anoplopoma fimbria (sablefish): 129092090
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Entry
129092090 CDS
T09102
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129092090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129092090
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129092090
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Motif
Other DBs
NCBI-GeneID:
129092090
NCBI-ProteinID:
XP_054455866
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Position
1:12338180..12344482
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AA seq
751 aa
AA seq
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MDNGQPPDKSPGEEGNGLDWLLKKDSSEIIPAPMDTNVSIPRHCSTSVDNIYSKAFTRER
VFKAASQGDPTQLDGLLEYLRVNEKQLTSPEFTDETNGKTALLKALLNLKDGKNDTVEVL
LDLAEKTGDLENIINASYKDPFYKGQTALHIAIERRSFDHVTLLVQKGADVQAKADGKFF
QRNAGLGFYFGELPLSLAACTNQPNIVSFLIENSYRRADVADKDSQGNTVLHALVVIADN
TAENTDMIAKMYDDILIQHNRLEKKKKIQLEMIENNQGLTPLKLAAKLGKIGLFRHMLHR
EFLDEEMRSLSRKFTDWVYGPVHSSLYDTSSIDTNEENSVLDIVVFGSDIPNRPEMLQVE
PLRSLLQDKWDRFASKLFLMNFLVYVSYLIIFTSVACYRKEGQPPFPIEDVPPDYFRCIG
ELLSVLGAMWFFYKAIIIFKRTPPTFKALYTYGFCDILFFLQATLLLICTVLYSCGLREY
VGLLVLSLALAWINVLYYSRGSKRMGMYSVMMERMILGDLLHFLCVYGVFLFGFSAAIVA
LIEDSPPANKKLPDGSPARGRNFDVEPFKCKKPSYNDVRFTMLELFKFTIGMGDLEFTDH
VQYKEVFYILLILYIVLTYILLLNMLIAVMGNTVEIISKESESIWNLQRAYTILDMERTL
PRCLKSKLYSGVSKVVCLRSGQDDNRRFFRVEEMNWRQWRSDVGYVQEEDPGDSMMKSQP
PDKTPGNLWNVNPFLERIRARRRQPQHSSVP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggacagccaccggacaaaagtccaggagaggaggggaatggtctggattgg
ctcctcaagaaagacagctcggagataattcctgcacctatggataccaacgtctcaata
cctagacactgtagtaccagtgttgacaacatttacagcaaagcattcaccagggagaga
gtcttcaaagcagcttcccagggagacccaactcaacttgatggcctgcttgagtacctg
agagttaatgagaagcaacttacgagcccagaattcacagatgaaacaaatggaaaaacg
gcgctcctgaaagctttgctgaacctaaaggatggcaaaaatgacacagttgaagtcctg
cttgacctagccgagaaaactggagacttggaaaatataatcaacgcatcttacaaagat
cctttctacaaaggtcagacagccttgcatatcgccattgagagaagaagctttgaccat
gtgacactgttggtccagaaaggagcagatgtgcaagccaaagccgacgggaagttcttc
cagcgtaatgcaggactgggcttttattttggagagcttcctctgtcactggctgcctgc
accaaccaacccaatattgtgtctttcctcatagaaaactcttacagaagagctgacgtg
gctgacaaagactcacaaggaaacactgtcttgcatgctttggtagtcatagcagacaat
acggcagaaaacaccgatatgattgcaaagatgtatgacgacatccttattcagcacaac
agacttgaaaaaaaaaaaaagatccagttggaaatgattgagaataatcaggggctgact
cctctgaagttagcagccaagctaggcaagattgggctgttcaggcacatgttacaccgg
gaattcttggatgaggagatgaggtcgctgtccaggaagtttacagattgggtctatgga
cccgttcactcttcactttacgacaccagttccatagacaccaacgaagaaaactctgtg
ttggacatagtcgtcttcgggagtgatattccgaatcgtcctgagatgctccaggtcgag
ccattgcgcagccttctccaggataagtgggacaggtttgcttccaagttattcttgatg
aatttcttggtctacgtgtcatacctgatcatcttcacctctgtggcctgctacaggaag
gaaggacagccaccgtttcccattgaagatgtcccgcccgactactttcgctgcattggc
gagctcctcagtgtccttggagcaatgtggtttttctataaagcgataataattttcaag
aggacccccccaaccttcaaggctctgtacacgtatggattctgtgacattctgtttttc
ctgcaggcgacgctcctcctgatctgcacagttttgtacagctgtgggttgagagagtac
gttggactcctcgtgctctcgctggctcttgcctggatcaatgttctttactactcacga
ggctctaaacgaatggggatgtacagtgtcatgatggaaagaatgatcctgggtgaccta
ttacacttcttgtgtgtgtatggtgtttttctttttggattttctgctgctattgttgcc
ctcatagaagactctcctccagctaataaaaagcttcctgatggttcaccggcacgtggg
aggaattttgacgttgagccatttaagtgcaagaagccgagttacaacgacgtccgtttt
acaatgctggagttgttcaagttcactataggaatgggagacctggagttcacggaccat
gtacagtacaaggaagtgttctacatcttgcttatcctgtacatagtgctcacttacatc
ctgctgctcaacatgctcatagccgtgatgggcaacacagtggaaataatctccaaagaa
agtgaaagcatctggaacctgcagagggcctatacaattttggacatggagaggactctg
ccgaggtgcctgaagagtaagctttactctggagtgtccaaagtggtgtgtttaaggagc
gggcaagacgacaatcgcagatttttcagggtggaggaaatgaactggagacaatggagg
tcagatgttggttatgtccaggaggaagaccccggggatagcatgatgaagtcacagccc
cccgacaaaactcctgggaatctgtggaacgtaaatccattcttggagaggatccgtgcc
agacggcgacaaccacagcactccagcgtgccctag
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