Anoplopoma fimbria (sablefish): 129092101
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Entry
129092101 CDS
T09102
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129092101 (rrp12)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
90S particles
Other 90S particles
129092101 (rrp12)
Pre-60S particles
Other pre-60S particles
129092101 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
129092101
NCBI-ProteinID:
XP_054455874
LinkDB
All DBs
Position
6:14280971..14292044
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AA seq
1287 aa
AA seq
DB search
MVKSGKLRSGTGSKLKRWKKGHSSDSNPQTSRYRQAAKSRFFSRPTGNSDLTVDALKLHN
DLQAGPLEIGGRKDAMEEEPEEVFSERTSGTFLSGLSDCSNLTFRKVQRYWESNSASHKE
ICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVDSAESQAAVAYLLNLVMKRVPTPVL
MSKFSDTTKALMDVMSKQAMFETASALRWILSCLATLLRKQDVSVWTYPTTLQAYHGLLS
FAVHSKPKVRKAAQQGVCSILRGSDFLFTDNAPTHHPAAATTAKFCMKEMEQAGGSKEDT
TTLHVLGLLKELMGTFPLGAVKSCCETLLRVMTLSHVLVTASAMQAFHRLFSGKPNALTL
SPELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLASLQSSLSLGHLPRLFSAAMS
CLLSPHTQVVSAATNTLKKLLTECVAPHMEGMGMITATASAGNPSYVCKMFRIIEEGLSY
RFHASWPFVLQILGCFYRAAGKQAHPVMAKSLQSLADLRSTPHFPFSGELDLAVGGAVES
MGPEVVLGAVPLNITGYEDDLEFPRSWLIPVIRDNVKNTHLGFFSSYFLPLASTLKQRAE
ELEQVGQKLESRVYKTLQIQIWTMLPGFCTCPVDLLASFKSIARTLGMIVNERPDLRLTV
CQALRTIVNKSCSTEEEKAEVGRFSKNFLPILFNVYGQQPAAGESGTYRMAVLDTIKVYL
TVTETEMICTFLQKATDRLSSTDTTEFTRLSMMDLVVAMAPSVDTVTMTKTFELIKPYLE
IKEPGMQKKAYRVLEEMCGGEREECRSFVVANLETLKVVLLETLKNASSPAKRPRLKCLI
HIVKRLSEEHKDFITTLLPEVIICTKEVSVGARKNAYSLLVEIGTAFVRFCGNTKDAMEQ
YLVLVYAGLTGSVTMITCTVLALTRLMFEYKDAIDVTTREQLLHNVCLLLTSRTREIVKA
ALGFIKVILFIMDPKTLGSHATVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFELVK
SMLPAEHHKVLANIRKAEARTKRMKQASEQHDDSESEDEEPKSKSQSIEDILADSDSDLS
EDEGKARNIKKKAGKPQKARAWLKEGEGDDPLNFLDPKVSQRVLSTNPAMKKSAKVEHGF
KVTSDGRLIIREDDEDDGKDKDEGEMKDILEEAGVKSKKTQKRKFQDDNLDEDMDIEPHL
KYKAGGSGIHRPLGGREDIGADYKSKKGKGDVKKQGKHDPYAYIPLKKAQLNRRKRAKLQ
GQFQGMVRGAQKGALSGKKMQKRKRKA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcggggaaacttcgatctggcacggggtctaaactcaaacggtggaagaag
ggacacagtagcgactcaaacccgcagacgagtcgttatcggcaggccgctaagagccgc
ttcttcagccgacccaccggaaatagcgacctaacggttgatgctcttaagctacacaat
gatctgcaggcaggcccgctggagatcggcggccgtaaagatgccatggaagaggagccc
gaagaggttttttcagaaaggacctcaggtaccttccttagcggcctgtcggactgctcc
aacctgaccttcagaaaggtgcagcgctactgggagtccaattcagcttctcacaaagag
atctgtgcagtgttggcagctgttactgaggtgatccgcagtcaaggagggaaggagaca
gaaactgagtactttgctgctttgatgaccacactggaagttgtggattctgcagagtct
caggctgcagtggcgtaccttctcaacctcgtcatgaaacgggttcctactccggtgctc
atgtctaagttctcggacaccaccaaggctctgatggacgtcatgtcaaaacaggccatg
tttgagacggcctcggctctgagatggatcctgtcatgcctggccactttgttgaggaag
caggatgtatccgtctggacctacccgactactcttcaggcttaccacgggcttctcagc
ttcgcagtgcacagcaagcctaaggtccgtaaagcagcgcagcaaggcgtttgctccatt
ctcagaggtagtgacttcctgtttacagataacgcaccgacccatcaccctgctgcagcg
accacggccaagttctgcatgaaagaaatggagcaggcaggaggcagcaaagaggacacc
accacacttcatgtgctgggtcttctgaaggagctgatggggacgtttcctctaggagct
gtcaagtcctgttgtgagactctgctgcgagtgatgacactcagccatgtgctggtgacg
gctagtgccatgcaggcctttcataggctgttcagcgggaagccaaatgctttaaccctc
tcaccagaactcaacgctcagatcatcacggctctgtacgactatctgcccagtgagaac
gacttgcagcctctgctggcttggctcgctgtcatggagaaagcacatgttcacttggcg
agtttgcagagttctctgagtttgggtcacctcccacgcctcttctctgcagccatgtcc
tgcctgttgtcgcctcatacgcaggtggtttctgcagccaccaatacactaaagaaattg
ttaactgaatgtgttgcccctcacatggagggaatgggcatgatcaccgccacagcctcc
gcaggaaacccctcctatgtctgcaaaatgtttcgtatcatagaagaaggactgtcttat
cgcttccatgcctcctggccatttgtgcttcaaatcctgggctgcttctatcgcgctgca
gggaaacaagctcaccccgtcatggccaagtccctgcagtctctggcagacctgcgctcc
actcctcatttccccttcagcggtgagttggacctggctgtaggaggagctgtagagagc
atggggcccgaagttgtgctgggtgccgtgcctctcaacatcaccggctacgaggatgac
ctggagttcccgcgcagctggctgatcccggtcatacgggataacgtgaagaacactcac
cttggtttcttctcttcttacttcctccctctggcctctacactcaagcagagagccgaa
gaattggagcaagtaggacagaaacttgagtccagagtctacaagacattacagatacag
atttggacaatgcttcctggcttctgtacttgtcctgtggacctgctggcatccttcaaa
agcattgcccgcacactcggtatgattgttaatgaacggccggacctcaggctcacagtg
tgccaggctctacgcacgattgtcaacaagagctgctccactgaggaagaaaaagctgaa
gtgggccgcttctccaagaacttcctgcccatccttttcaacgtgtacggccagcagccc
gcggctggagagtccggcacctacaggatggctgtgctggacaccatcaaggtctacctc
actgtcaccgaaacagagatgatctgcacgttcctgcaaaaagccacagacagattgagc
agcactgacacaactgagttcacaaggctgtcaatgatggaccttgttgttgccatggct
ccgtccgtagatacggtcaccatgactaaaacctttgagctgattaagccatatttggag
atcaaagagccaggcatgcagaagaaggcttaccgtgtgctggaggagatgtgcggagga
gagagagaggagtgcagatcgtttgtcgtggctaatctggaaacactcaaagttgtcctg
ctggaaactctaaaaaatgcctcctcaccagcaaagaggccgagactgaagtgtctgatc
cacatagtgaaaaggctcagtgaagaacacaaagactttatcacaacactgctgcctgag
gtgattatatgcaccaaggaggtgtctgttggagcgcgcaagaatgcctacagtctgctg
gtggaaataggaaccgcatttgtccgcttctgtgggaacacaaaagatgcgatggagcag
tacctggtgttagtgtacgctggactcacaggctccgtcacgatgatcacctgtacagtg
ttggcgctaactcgactgatgtttgagtataaagatgctatagatgtgaccaccagggag
cagctgctgcacaatgtgtgtctgctgctgacatctcgtaccagagagatagtcaaagcc
gccttaggcttcatcaaggtcatcctcttcataatggaccccaagacgctgggatcacat
gccactgtcatgatggagggtgttgggaacatcaaagacgacgtgaggaggcacttcagg
accaaactgaagaacatctttactaagttcatcaggaagtttggttttgagctggtgaaa
agcatgctgcctgcagaacaccacaaggtccttgcaaacatccgcaaggccgaggctcgc
accaagaggatgaaacaggcttcagagcaacatgacgactccgagagcgaagacgaggaa
cctaaatcaaagagccaaagtattgaagacatccttgcagattcagacagtgatttgtca
gaggatgaaggaaaggctcgtaatattaagaagaaagcaggcaaaccacaaaaagcccgg
gcctggctcaaagaaggagagggagatgacccacttaacttcctggatcccaaggtttcc
cagagagtgctatccaccaacccagcgatgaaaaagagtgccaaggtcgagcacggcttc
aaggtgacatcagacggacggctgatcatcagagaggatgacgaggacgatggaaaagac
aaagatgagggagagatgaaagatatcctagaagaggccggagtcaagagtaaaaaaaca
cagaaaagaaagttccaagatgacaacttggatgaggacatggacattgaaccacatcta
aaatataaagctgggggctcaggtatccacagacccctgggaggaagggaagacatcggg
gcagactacaagtcaaagaaaggaaaaggagacgtgaagaaacaaggaaagcatgatcca
tacgcttacatccctctgaagaaggcccagctcaatcgaaggaagcgtgccaaactgcag
ggccagttccagggcatggtgagaggagcccagaagggggcgctgtctggaaagaaaatg
cagaagagaaaaaggaaagcctga
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